RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 GP6Q9HCN6 339 aa15.77■□□□□ 0.12
TPM4-206ENST00000587201 CTPS2Q9NRF8 586 aa15.77■□□□□ 0.12
TPM4-206ENST00000587201 P2RX2Q9UBL9 471 aa15.77■□□□□ 0.12
TPM4-206ENST00000587201 ABCA4P78363 2273 aa15.77■□□□□ 0.11
TPM4-206ENST00000587201 DEFB108AA8MXU0 73 aa15.76■□□□□ 0.11
TPM4-206ENST00000587201 HMGB1P1B2RPK0 211 aaPredicted RBP15.76■□□□□ 0.11
TPM4-206ENST00000587201 SIAH2O43255 324 aa15.76■□□□□ 0.11
TPM4-206ENST00000587201 YES1P07947 543 aa15.76■□□□□ 0.11
TPM4-206ENST00000587201 ETFAP13804 333 aa15.76■□□□□ 0.11
TPM4-206ENST00000587201 PPP3CBP16298 524 aa15.76■□□□□ 0.11
TPM4-206ENST00000587201 MAGEA8P43361 318 aa15.76■□□□□ 0.11
TPM4-206ENST00000587201 IDH2P48735 452 aaKnown RBP15.76■□□□□ 0.11
TPM4-206ENST00000587201 DIO1P49895 249 aa15.76■□□□□ 0.11
TPM4-206ENST00000587201 IDH3AP50213 366 aa15.76■□□□□ 0.11
TPM4-206ENST00000587201 MVDP53602 400 aa15.76■□□□□ 0.11
TPM4-206ENST00000587201 DSTNP60981 165 aa15.76■□□□□ 0.11
TPM4-206ENST00000587201 PLAURQ03405 335 aa15.76■□□□□ 0.11
TPM4-206ENST00000587201 SYT14P1Q58G82 188 aa15.76■□□□□ 0.11
TPM4-206ENST00000587201 STAC2Q6ZMT1 411 aa15.76■□□□□ 0.11
TPM4-206ENST00000587201 TMPPEQ6ZT21 453 aa15.76■□□□□ 0.11
TPM4-206ENST00000587201 C22orf34Q6ZV56 151 aa15.76■□□□□ 0.11
TPM4-206ENST00000587201 GRINAQ7Z429 371 aa15.76■□□□□ 0.11
TPM4-206ENST00000587201 PEX5LQ8IYB4 626 aa15.76■□□□□ 0.11
TPM4-206ENST00000587201 SLC25A43Q8WUT9 341 aaPredicted RBP15.76■□□□□ 0.11
TPM4-206ENST00000587201 PMM1Q92871 262 aa15.76■□□□□ 0.11
TPM4-206ENST00000587201 AURKBQ96GD4 344 aaPredicted RBP15.76■□□□□ 0.11
TPM4-206ENST00000587201 EBF4Q9BQW3 602 aa15.76■□□□□ 0.11
TPM4-206ENST00000587201 TACO1Q9BSH4 297 aaKnown RBP15.76■□□□□ 0.11
TPM4-206ENST00000587201 CXXC4Q9H2H0 198 aa15.76■□□□□ 0.11
TPM4-206ENST00000587201 INTS9Q9NV88 658 aaKnown RBP15.76■□□□□ 0.11
TPM4-206ENST00000587201 KLHL9Q9P2J3 617 aa15.76■□□□□ 0.11
TPM4-206ENST00000587201 CHRNA9Q9UGM1 479 aa15.76■□□□□ 0.11
TPM4-206ENST00000587201 SULT2B1O00204 365 aa15.75■□□□□ 0.11
TPM4-206ENST00000587201 ADAM11O75078 769 aa15.75■□□□□ 0.11
TPM4-206ENST00000587201 ATE1O95260 518 aa15.75■□□□□ 0.11
TPM4-206ENST00000587201 BCHEP06276 602 aa15.75■□□□□ 0.11
TPM4-206ENST00000587201 DBIP07108 87 aaKnown RBP15.75■□□□□ 0.11
TPM4-206ENST00000587201 AQP5P55064 265 aa15.75■□□□□ 0.11
TPM4-206ENST00000587201 CSNK2A1P68400 391 aaPredicted RBP15.75■□□□□ 0.11
TPM4-206ENST00000587201 RASGEF1BQ0VAM2 473 aa15.75■□□□□ 0.11
TPM4-206ENST00000587201 MRPL2Q5T653 305 aaKnown RBP15.75■□□□□ 0.11
TPM4-206ENST00000587201 SLC2A7Q6PXP3 512 aa15.75■□□□□ 0.11
TPM4-206ENST00000587201 MBD6Q96DN6 1003 aa15.75■□□□□ 0.11
TPM4-206ENST00000587201 ALPK1Q96QP1 1244 aa15.75■□□□□ 0.11
TPM4-206ENST00000587201 PSD2Q9BQI7 771 aa15.75■□□□□ 0.11
TPM4-206ENST00000587201 CCDC28BQ9BUN5 200 aa15.75■□□□□ 0.11
TPM4-206ENST00000587201 ACTR6Q9GZN1 396 aa15.75■□□□□ 0.11
TPM4-206ENST00000587201 VIPAS39Q9H9C1 493 aa15.75■□□□□ 0.11
TPM4-206ENST00000587201 CALML5Q9NZT1 146 aa15.75■□□□□ 0.11
TPM4-206ENST00000587201 GPR52Q9Y2T5 361 aa15.75■□□□□ 0.11
TPM4-206ENST00000587201 TEP1Q99973 2627 aaKnown RBP15.75■□□□□ 0.11
TPM4-206ENST00000587201 TMEM247A6NEH6 219 aa15.74■□□□□ 0.11
TPM4-206ENST00000587201 AP3D1O14617 1153 aa15.74■□□□□ 0.11
TPM4-206ENST00000587201 SMAD9O15198 467 aaKnown RBP15.74■□□□□ 0.11
TPM4-206ENST00000587201 CYTIPO60759 359 aa15.74■□□□□ 0.11
TPM4-206ENST00000587201 FESP07332 822 aa15.74■□□□□ 0.11
TPM4-206ENST00000587201 KLK2P20151 261 aa15.74■□□□□ 0.11
TPM4-206ENST00000587201 CCNA2P20248 432 aa15.74■□□□□ 0.11
TPM4-206ENST00000587201 RPS4Y1P22090 263 aaKnown RBP15.74■□□□□ 0.11
TPM4-206ENST00000587201 HTR3AP46098 478 aa15.74■□□□□ 0.11
TPM4-206ENST00000587201 MRPL19P49406 292 aaKnown RBP15.74■□□□□ 0.11
TPM4-206ENST00000587201 CRISP3P54108 245 aa15.74■□□□□ 0.11
TPM4-206ENST00000587201 PPP2R2AP63151 447 aa15.74■□□□□ 0.11
TPM4-206ENST00000587201 MAPK11Q15759 364 aa15.74■□□□□ 0.11
TPM4-206ENST00000587201 DEFB113Q30KQ7 82 aa15.74■□□□□ 0.11
TPM4-206ENST00000587201 TFAP2EQ6VUC0 442 aa15.74■□□□□ 0.11
TPM4-206ENST00000587201 OR52P1PQ8NH57 321 aa15.74■□□□□ 0.11
TPM4-206ENST00000587201 GTF2H4Q92759 462 aa15.74■□□□□ 0.11
TPM4-206ENST00000587201 DNAJA3Q96EY1 480 aa15.74■□□□□ 0.11
TPM4-206ENST00000587201 BCO1Q9HAY6 547 aa15.74■□□□□ 0.11
TPM4-206ENST00000587201 THUMPD1Q9NXG2 353 aaKnown RBP15.74■□□□□ 0.11
TPM4-206ENST00000587201 PCDHB14Q9Y5E9 798 aa15.74■□□□□ 0.11
TPM4-206ENST00000587201 HRNRQ86YZ3 2850 aaPredicted RBP15.74■□□□□ 0.11
TPM4-206ENST00000587201 CFAP73A6NFT4 308 aa15.73■□□□□ 0.11
TPM4-206ENST00000587201 THBDP07204 575 aa15.73■□□□□ 0.11
TPM4-206ENST00000587201 TFPTP0C1Z6 253 aa15.73■□□□□ 0.11
TPM4-206ENST00000587201 UQCRBP14927 111 aa15.73■□□□□ 0.11
TPM4-206ENST00000587201 PSMB1P20618 241 aaKnown RBP15.73■□□□□ 0.11
TPM4-206ENST00000587201 FKBP2P26885 142 aaKnown RBP15.73■□□□□ 0.11
TPM4-206ENST00000587201 LIN52Q52LA3 116 aa15.73■□□□□ 0.11
TPM4-206ENST00000587201 CXorf67Q86X51 503 aaPredicted RBP15.73■□□□□ 0.11
TPM4-206ENST00000587201 VRK2Q86Y07 508 aa15.73■□□□□ 0.11
TPM4-206ENST00000587201 ADGRG3Q86Y34 549 aa15.73■□□□□ 0.11
TPM4-206ENST00000587201 SLC38A5Q8WUX1 472 aa15.73■□□□□ 0.11
TPM4-206ENST00000587201 ZNF775Q96BV0 537 aaPredicted RBP15.73■□□□□ 0.11
TPM4-206ENST00000587201 ZHX1-C8orf76Q96EF9 292 aa15.73■□□□□ 0.11
TPM4-206ENST00000587201 TMEM19Q96HH6 336 aa15.73■□□□□ 0.11
TPM4-206ENST00000587201 ARL5BQ96KC2 179 aa15.73■□□□□ 0.11
TPM4-206ENST00000587201 ZNF300Q96RE9 604 aaPredicted RBP15.73■□□□□ 0.11
TPM4-206ENST00000587201 PAIP1Q9H074 479 aaKnown RBP15.73■□□□□ 0.11
TPM4-206ENST00000587201 RAD21L1Q9H4I0 556 aa15.73■□□□□ 0.11
TPM4-206ENST00000587201 CACYBPQ9HB71 228 aaKnown RBP15.73■□□□□ 0.11
TPM4-206ENST00000587201 CCDC167Q9P0B6 97 aa15.73■□□□□ 0.11
TPM4-206ENST00000587201 ING1Q9UK53 422 aaPredicted RBP15.73■□□□□ 0.11
TPM4-206ENST00000587201 HDGFL3Q9Y3E1 203 aa15.73■□□□□ 0.11
TPM4-206ENST00000587201 DSPPQ9NZW4 1301 aa15.72■□□□□ 0.11
TPM4-206ENST00000587201 TMED7-TICAM2A0A0A6YYA0 188 aa15.72■□□□□ 0.11
TPM4-206ENST00000587201 CLIC1O00299 241 aa15.72■□□□□ 0.11
TPM4-206ENST00000587201 NR5A2O00482 541 aa15.72■□□□□ 0.11
TPM4-206ENST00000587201 GCM2O75603 506 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms