RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 FABP6P51161 128 aa10.42□□□□□ -0.74
BRCA1-225ENST00000586385 CCR4P51679 360 aa10.42□□□□□ -0.74
BRCA1-225ENST00000586385 EFNA4P52798 201 aa10.42□□□□□ -0.74
BRCA1-225ENST00000586385 RPS26P62854 115 aaKnown RBP10.42□□□□□ -0.74
BRCA1-225ENST00000586385 CHRNEQ04844 493 aa10.42□□□□□ -0.74
BRCA1-225ENST00000586385 TP53BP2Q13625 1128 aa10.42□□□□□ -0.74
BRCA1-225ENST00000586385 PTGR1Q14914 329 aa10.42□□□□□ -0.74
BRCA1-225ENST00000586385 PCLAFQ15004 111 aa10.42□□□□□ -0.74
BRCA1-225ENST00000586385 PDK3Q15120 406 aa10.42□□□□□ -0.74
BRCA1-225ENST00000586385 RAB35Q15286 201 aa10.42□□□□□ -0.74
BRCA1-225ENST00000586385 ZNF141Q15928 474 aa10.42□□□□□ -0.74
BRCA1-225ENST00000586385 MAPK14Q16539 360 aa10.42□□□□□ -0.74
BRCA1-225ENST00000586385 GALNTL6Q49A17 601 aa10.42□□□□□ -0.74
BRCA1-225ENST00000586385 SYT14P1Q58G82 188 aa10.42□□□□□ -0.74
BRCA1-225ENST00000586385 ZNF544Q6NX49 715 aa10.42□□□□□ -0.74
BRCA1-225ENST00000586385 SSX8Q7RTT4 187 aa10.42□□□□□ -0.74
BRCA1-225ENST00000586385 MTDHQ86UE4 582 aaKnown RBP10.42□□□□□ -0.74
BRCA1-225ENST00000586385 C10orf107Q8IVU9 208 aa10.42□□□□□ -0.74
BRCA1-225ENST00000586385 CCDC103Q8IW40 242 aa10.42□□□□□ -0.74
BRCA1-225ENST00000586385 FBXL14Q8N1E6 418 aa10.42□□□□□ -0.74
BRCA1-225ENST00000586385 KRTCAP2Q8N6L1 136 aa10.42□□□□□ -0.74
BRCA1-225ENST00000586385 TMCO5AQ8N6Q1 288 aa10.42□□□□□ -0.74
BRCA1-225ENST00000586385 TOR1AIP2Q8NFQ8 470 aa10.42□□□□□ -0.74
BRCA1-225ENST00000586385 OR52E4Q8NGH9 312 aa10.42□□□□□ -0.74
BRCA1-225ENST00000586385 OR5AK3PQ8NH89 298 aa10.42□□□□□ -0.74
BRCA1-225ENST00000586385 ADAMTS15Q8TE58 950 aa10.42□□□□□ -0.74
BRCA1-225ENST00000586385 OR5P2Q8WZ92 322 aa10.42□□□□□ -0.74
BRCA1-225ENST00000586385 PROX1Q92786 737 aa10.42□□□□□ -0.74
BRCA1-225ENST00000586385 COQ8BQ96D53 544 aa10.42□□□□□ -0.74
BRCA1-225ENST00000586385 DNAJA3Q96EY1 480 aa10.42□□□□□ -0.74
BRCA1-225ENST00000586385 ARL5BQ96KC2 179 aa10.42□□□□□ -0.74
BRCA1-225ENST00000586385 INPP5KQ9BT40 448 aa10.42□□□□□ -0.74
BRCA1-225ENST00000586385 PRR14Q9BWN1 585 aa10.42□□□□□ -0.74
BRCA1-225ENST00000586385 NMUR2Q9GZQ4 415 aa10.42□□□□□ -0.74
BRCA1-225ENST00000586385 LAT2Q9GZY6 243 aa10.42□□□□□ -0.74
BRCA1-225ENST00000586385 SHARPINQ9H0F6 387 aa10.42□□□□□ -0.74
BRCA1-225ENST00000586385 LPAR3Q9UBY5 353 aa10.42□□□□□ -0.74
BRCA1-225ENST00000586385 MGAT4BQ9UQ53 548 aa10.42□□□□□ -0.74
BRCA1-225ENST00000586385 TMED5Q9Y3A6 229 aa10.42□□□□□ -0.74
BRCA1-225ENST00000586385 TRAF6Q9Y4K3 522 aa10.42□□□□□ -0.74
BRCA1-225ENST00000586385 IGHV4-61A0A0C4DH41 118 aa10.41□□□□□ -0.74
BRCA1-225ENST00000586385 M0R1B8 84 aa10.41□□□□□ -0.74
BRCA1-225ENST00000586385 PIP5K1BO14986 540 aa10.41□□□□□ -0.74
BRCA1-225ENST00000586385 UGT2B17O75795 530 aa10.41□□□□□ -0.74
BRCA1-225ENST00000586385 SHBGP04278 402 aa10.41□□□□□ -0.74
BRCA1-225ENST00000586385 ARRB2P32121 409 aa10.41□□□□□ -0.74
BRCA1-225ENST00000586385 CRHR1P34998 444 aa10.41□□□□□ -0.74
BRCA1-225ENST00000586385 ASMTP46597 345 aa10.41□□□□□ -0.74
BRCA1-225ENST00000586385 SLC16A1P53985 500 aa10.41□□□□□ -0.74
BRCA1-225ENST00000586385 LSM11P83369 360 aaKnown RBP eCLIP10.41□□□□□ -0.74
BRCA1-225ENST00000586385 MERTKQ12866 999 aa10.41□□□□□ -0.74
BRCA1-225ENST00000586385 CBFBQ13951 182 aa10.41□□□□□ -0.74
BRCA1-225ENST00000586385 CCDC153Q494R4 210 aa10.41□□□□□ -0.74
BRCA1-225ENST00000586385 XKR7Q5GH72 579 aa10.41□□□□□ -0.74
BRCA1-225ENST00000586385 FAM120AOSQ5T036 256 aa10.41□□□□□ -0.74
BRCA1-225ENST00000586385 R3HCC1LQ7Z5L2 792 aaKnown RBP10.41□□□□□ -0.74
BRCA1-225ENST00000586385 RIMKLAQ8IXN7 391 aa10.41□□□□□ -0.74
BRCA1-225ENST00000586385 CLEC4FQ8N1N0 589 aa10.41□□□□□ -0.74
BRCA1-225ENST00000586385 UBE2J2Q8N2K1 259 aa10.41□□□□□ -0.74
BRCA1-225ENST00000586385 FAM71CQ8NEG0 241 aa10.41□□□□□ -0.74
BRCA1-225ENST00000586385 OR56A1Q8NGH5 318 aa10.41□□□□□ -0.74
BRCA1-225ENST00000586385 SFXN5Q8TD22 340 aa10.41□□□□□ -0.74
BRCA1-225ENST00000586385 TWIST2Q8WVJ9 160 aa10.41□□□□□ -0.74
BRCA1-225ENST00000586385 ST8SIA1Q92185 356 aa10.41□□□□□ -0.74
BRCA1-225ENST00000586385 APH1AQ96BI3 265 aa10.41□□□□□ -0.74
BRCA1-225ENST00000586385 MSI2Q96DH6 328 aaKnown RBP10.41□□□□□ -0.74
BRCA1-225ENST00000586385 C3orf30Q96M34 536 aa10.41□□□□□ -0.74
BRCA1-225ENST00000586385 SOX7Q9BT81 388 aa10.41□□□□□ -0.74
BRCA1-225ENST00000586385 CCDC106Q9BWC9 280 aa10.41□□□□□ -0.74
BRCA1-225ENST00000586385 ACER3Q9NUN7 267 aa10.41□□□□□ -0.74
BRCA1-225ENST00000586385 TAS2R16Q9NYV7 291 aa10.41□□□□□ -0.74
BRCA1-225ENST00000586385 POU2F3Q9UKI9 436 aa10.41□□□□□ -0.74
BRCA1-225ENST00000586385 FAF1Q9UNN5 650 aaPredicted RBP10.41□□□□□ -0.74
BRCA1-225ENST00000586385 NOSIPQ9Y314 301 aaKnown RBP10.41□□□□□ -0.74
BRCA1-225ENST00000586385 CIB4A0PJX0 185 aa10.4□□□□□ -0.74
BRCA1-225ENST00000586385 CCT8L1PA6NM43 557 aa10.4□□□□□ -0.74
BRCA1-225ENST00000586385 ATP6V1G2-DDX39BF2Z307 99 aa10.4□□□□□ -0.74
BRCA1-225ENST00000586385 SULT2B1O00204 365 aa10.4□□□□□ -0.74
BRCA1-225ENST00000586385 CYP7B1O75881 506 aa10.4□□□□□ -0.74
BRCA1-225ENST00000586385 FGF4P08620 206 aa10.4□□□□□ -0.74
BRCA1-225ENST00000586385 UBTFL6P0CB48 400 aaPredicted RBP10.4□□□□□ -0.74
BRCA1-225ENST00000586385 SRD5A1P18405 259 aa10.4□□□□□ -0.74
BRCA1-225ENST00000586385 PGM1P36871 562 aa10.4□□□□□ -0.74
BRCA1-225ENST00000586385 HPCAL1P37235 193 aa10.4□□□□□ -0.74
BRCA1-225ENST00000586385 HBA1P69905 142 aa10.4□□□□□ -0.74
BRCA1-225ENST00000586385 SWI5Q1ZZU3 235 aa10.4□□□□□ -0.74
BRCA1-225ENST00000586385 C9orf135Q5VTT2 229 aa10.4□□□□□ -0.74
BRCA1-225ENST00000586385 C16orf45Q96MC5 204 aaPredicted RBP10.4□□□□□ -0.74
BRCA1-225ENST00000586385 SORCS2Q96PQ0 1159 aa10.4□□□□□ -0.74
BRCA1-225ENST00000586385 C1orf50Q9BV19 199 aa10.4□□□□□ -0.74
BRCA1-225ENST00000586385 OR11A1Q9GZK7 315 aa10.4□□□□□ -0.74
BRCA1-225ENST00000586385 ZNF350Q9GZX5 532 aa10.4□□□□□ -0.74
BRCA1-225ENST00000586385 EML4Q9HC35 981 aaKnown RBP10.4□□□□□ -0.74
BRCA1-225ENST00000586385 CTPS2Q9NRF8 586 aa10.4□□□□□ -0.74
BRCA1-225ENST00000586385 ASB6Q9NWX5 421 aa10.4□□□□□ -0.74
BRCA1-225ENST00000586385 EMC3Q9P0I2 261 aa10.4□□□□□ -0.74
BRCA1-225ENST00000586385 MKLN1Q9UL63 735 aa10.4□□□□□ -0.74
BRCA1-225ENST00000586385 PEX11AO75192 247 aa10.39□□□□□ -0.75
BRCA1-225ENST00000586385 PMS2P2O95744 297 aa10.39□□□□□ -0.75
BRCA1-225ENST00000586385 CSTAP01040 98 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms