RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 ALG10BQ5I7T1 473 aa13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 SWT1Q5T5J6 900 aaKnown RBP13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 PGM2L1Q6PCE3 622 aa13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 ZNF613Q6PF04 617 aa13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 ULK3Q6PHR2 472 aa13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 Q6ZPB1 254 aaPredicted RBP13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 VTCN1Q7Z7D3 282 aa13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 CD163Q86VB7 1156 aa13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 UBQLNLQ8IYU4 475 aa13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 LILRA2Q8N149 483 aa13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 ELOA3Q8NG57 546 aa13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 OR5M9Q8NGP3 310 aa13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 DDIT4LQ96D03 193 aa13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 SLC47A1Q96FL8 570 aa13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 PYURFQ96I23 114 aa13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 PRDM14Q9GZV8 571 aa13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 TP63Q9H3D4 680 aaPredicted RBP13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 C12orf10Q9HB07 376 aa13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 CTPS2Q9NRF8 586 aa13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 PAQR5Q9NXK6 330 aaPredicted RBP13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 OSGIN2Q9Y236 505 aa13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 ZNF835Q9Y2P0 537 aa13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 TMED7Q9Y3B3 224 aa13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 FAM32AQ9Y421 112 aaKnown RBP13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 KALRNO60229 2985 aa13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 BSNQ9UPA5 3926 aa13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 A0A1B0GWA3 101 aa13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 TRAPPC13A5PLN9 417 aa13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 CPSF4LA6NMK7 179 aaKnown RBP13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 AHRRA9YTQ3 701 aa13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 SEC14L5O43304 696 aa13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 WISP2O76076 250 aa13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 PRKD3O94806 890 aa13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 TFPIP10646 304 aa13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 ZNF708P17019 499 aa13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 ITGA2P17301 1181 aa13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 TNFRSF1BP20333 461 aa13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 ATP6V1B2P21281 511 aa13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 PSMA4P25789 261 aaKnown RBP13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 HTR2AP28223 471 aa13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 OR1E2P47887 323 aa13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 STARP49675 285 aa13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 CLK1P49759 484 aaKnown RBP13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 TAS2R41P59536 307 aa13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 SRYQ05066 204 aa13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 MRPL49Q13405 166 aaKnown RBP13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 GXYLT1Q4G148 440 aa13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 ENTPD8Q5MY95 495 aa13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 ZNF585AQ6P3V2 769 aa13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 ESPNLQ6ZVH7 1005 aa13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 ASRGL1Q7L266 308 aa13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 FGD2Q7Z6J4 655 aa13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 LACC1Q8IV20 430 aa13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 ATP6V1C2Q8NEY4 427 aa13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 OR10Q1Q8NGQ4 319 aa13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 C3orf49Q96BT1 292 aa13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 WDYHV1Q96HA8 205 aa13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 KLHL15Q96M94 604 aa13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 RSPO3Q9BXY4 272 aaPredicted RBP13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 ADAM19Q9H013 955 aa13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 TMEM185BQ9H7F4 350 aa13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 TIGARQ9NQ88 270 aa13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 ALKBH4Q9NXW9 302 aa13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 TNFRSF10DQ9UBN6 386 aa13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 OSGIN1Q9UJX0 560 aa13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 V9GYQ6 96 aa13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 HEATR5AQ86XA9 2040 aa13.16□□□□□ -0.3
SCAMP4-209ENST00000585335 SHANK1Q9Y566 2161 aa13.15□□□□□ -0.3
SCAMP4-209ENST00000585335 CHD6Q8TD26 2715 aa13.15□□□□□ -0.3
SCAMP4-209ENST00000585335 TRGV8A0A0C4DH27 118 aa13.15□□□□□ -0.3
SCAMP4-209ENST00000585335 AQP12BA6NM10 295 aa13.15□□□□□ -0.3
SCAMP4-209ENST00000585335 EIF1AYO14602 144 aaKnown RBP13.15□□□□□ -0.3
SCAMP4-209ENST00000585335 ZNF208O43345 1280 aa13.15□□□□□ -0.3
SCAMP4-209ENST00000585335 OR5F1O95221 314 aa13.15□□□□□ -0.3
SCAMP4-209ENST00000585335 HOXB6P17509 224 aaKnown RBP13.15□□□□□ -0.3
SCAMP4-209ENST00000585335 CCNA2P20248 432 aa13.15□□□□□ -0.3
SCAMP4-209ENST00000585335 GNLYP22749 145 aa13.15□□□□□ -0.3
SCAMP4-209ENST00000585335 SFTPDP35247 375 aa13.15□□□□□ -0.3
SCAMP4-209ENST00000585335 CLDN18P56856 261 aa13.15□□□□□ -0.3
SCAMP4-209ENST00000585335 MS4A2Q01362 244 aa13.15□□□□□ -0.3
SCAMP4-209ENST00000585335 TMEM176BQ3YBM2 270 aaPredicted RBP13.15□□□□□ -0.3
SCAMP4-209ENST00000585335 FAM98BQ52LJ0 330 aaKnown RBP13.15□□□□□ -0.3
SCAMP4-209ENST00000585335 SYT14P1Q58G82 188 aa13.15□□□□□ -0.3
SCAMP4-209ENST00000585335 DCST1Q5T197 706 aa13.15□□□□□ -0.3
SCAMP4-209ENST00000585335 C5orf46Q6UWT4 87 aa13.15□□□□□ -0.3
SCAMP4-209ENST00000585335 RBM45Q8IUH3 476 aaKnown RBP13.15□□□□□ -0.3
SCAMP4-209ENST00000585335 CHERPQ8IWX8 916 aaKnown RBP13.15□□□□□ -0.3
SCAMP4-209ENST00000585335 AQP12AQ8IXF9 295 aa13.15□□□□□ -0.3
SCAMP4-209ENST00000585335 OR4D11Q8NGI4 311 aa13.15□□□□□ -0.3
SCAMP4-209ENST00000585335 ADAMTS16Q8TE57 1224 aa13.15□□□□□ -0.3
SCAMP4-209ENST00000585335 PRRC1Q96M27 445 aa13.15□□□□□ -0.3
SCAMP4-209ENST00000585335 RAB3IPQ96QF0 476 aaPredicted RBP13.15□□□□□ -0.3
SCAMP4-209ENST00000585335 NPAS1Q99742 590 aa13.15□□□□□ -0.3
SCAMP4-209ENST00000585335 PNPLA3Q9NST1 481 aa13.15□□□□□ -0.3
SCAMP4-209ENST00000585335 SLC7A8Q9UHI5 535 aa13.15□□□□□ -0.3
SCAMP4-209ENST00000585335 POMPQ9Y244 141 aa13.15□□□□□ -0.3
SCAMP4-209ENST00000585335 FREM3P0C091 2139 aa13.15□□□□□ -0.3
SCAMP4-209ENST00000585335 SVILO95425 2214 aa13.15□□□□□ -0.31
SCAMP4-209ENST00000585335 PCNX3Q9H6A9 2034 aa13.14□□□□□ -0.31
SCAMP4-209ENST00000585335 A0A0B4J2E0 115 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms