RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 NSMCE2Q96MF7 247 aa12.53□□□□□ -0.4
TRAF4-215ENST00000584944 BTBD10Q9BSF8 475 aa12.53□□□□□ -0.4
TRAF4-215ENST00000584944 PRRG4Q9BZD6 226 aa12.53□□□□□ -0.4
TRAF4-215ENST00000584944 TRIM15Q9C019 465 aa12.53□□□□□ -0.4
TRAF4-215ENST00000584944 PNPLA3Q9NST1 481 aa12.53□□□□□ -0.4
TRAF4-215ENST00000584944 ACER3Q9NUN7 267 aa12.53□□□□□ -0.4
TRAF4-215ENST00000584944 TESQ9UGI8 421 aaKnown RBP12.53□□□□□ -0.4
TRAF4-215ENST00000584944 TINAGQ9UJW2 476 aa12.53□□□□□ -0.4
TRAF4-215ENST00000584944 SAMD4AQ9UPU9 718 aaKnown RBP12.53□□□□□ -0.4
TRAF4-215ENST00000584944 SLC5A6Q9Y289 635 aa12.53□□□□□ -0.4
TRAF4-215ENST00000584944 ZNF337Q9Y3M9 751 aa12.53□□□□□ -0.4
TRAF4-215ENST00000584944 SNX13Q9Y5W8 968 aa12.53□□□□□ -0.4
TRAF4-215ENST00000584944 ELOA3DA6NLF2 546 aaPredicted RBP12.52□□□□□ -0.41
TRAF4-215ENST00000584944 AHRRA9YTQ3 701 aa12.52□□□□□ -0.41
TRAF4-215ENST00000584944 FAAHO00519 579 aa12.52□□□□□ -0.41
TRAF4-215ENST00000584944 ZNHIT1O43257 154 aa12.52□□□□□ -0.41
TRAF4-215ENST00000584944 TPST1O60507 370 aa12.52□□□□□ -0.41
TRAF4-215ENST00000584944 BCAS1O75363 584 aaPredicted RBP12.52□□□□□ -0.41
TRAF4-215ENST00000584944 DNAJC8O75937 253 aaPredicted RBP12.52□□□□□ -0.41
TRAF4-215ENST00000584944 SYNGR4O95473 234 aa12.52□□□□□ -0.41
TRAF4-215ENST00000584944 T-ENOLP0DO92 83 aa12.52□□□□□ -0.41
TRAF4-215ENST00000584944 GGT1P19440 569 aa12.52□□□□□ -0.41
TRAF4-215ENST00000584944 ACVR2AP27037 513 aa12.52□□□□□ -0.41
TRAF4-215ENST00000584944 TACR3P29371 465 aa12.52□□□□□ -0.41
TRAF4-215ENST00000584944 KCNJ5P48544 419 aa12.52□□□□□ -0.41
TRAF4-215ENST00000584944 RAC1P63000 192 aa12.52□□□□□ -0.41
TRAF4-215ENST00000584944 HOXC5Q00444 222 aa12.52□□□□□ -0.41
TRAF4-215ENST00000584944 CRYZQ08257 329 aaKnown RBP12.52□□□□□ -0.41
TRAF4-215ENST00000584944 BNIP1Q12981 228 aa12.52□□□□□ -0.41
TRAF4-215ENST00000584944 BCL2A1Q16548 175 aa12.52□□□□□ -0.41
TRAF4-215ENST00000584944 DUSP7Q16829 419 aa12.52□□□□□ -0.41
TRAF4-215ENST00000584944 ELOA3BQ3SY89 546 aa12.52□□□□□ -0.41
TRAF4-215ENST00000584944 ZNF787Q6DD87 383 aa12.52□□□□□ -0.41
TRAF4-215ENST00000584944 TMEM211Q6ICI0 200 aa12.52□□□□□ -0.41
TRAF4-215ENST00000584944 C3P1Q6ZMU1 363 aa12.52□□□□□ -0.41
TRAF4-215ENST00000584944 DEF8Q6ZN54 512 aa12.52□□□□□ -0.41
TRAF4-215ENST00000584944 PLEKHM3Q6ZWE6 761 aa12.52□□□□□ -0.41
TRAF4-215ENST00000584944 P4HA3Q7Z4N8 544 aa12.52□□□□□ -0.41
TRAF4-215ENST00000584944 FJX1Q86VR8 437 aa12.52□□□□□ -0.41
TRAF4-215ENST00000584944 ELOA3Q8NG57 546 aa12.52□□□□□ -0.41
TRAF4-215ENST00000584944 OR10Q1Q8NGQ4 319 aa12.52□□□□□ -0.41
TRAF4-215ENST00000584944 SLC25A43Q8WUT9 341 aaPredicted RBP12.52□□□□□ -0.41
TRAF4-215ENST00000584944 DNAJA4Q8WW22 397 aaPredicted RBP12.52□□□□□ -0.41
TRAF4-215ENST00000584944 CCDC124Q96CT7 223 aaKnown RBP12.52□□□□□ -0.41
TRAF4-215ENST00000584944 DDIT4LQ96D03 193 aa12.52□□□□□ -0.41
TRAF4-215ENST00000584944 TRIB1Q96RU8 372 aa12.52□□□□□ -0.41
TRAF4-215ENST00000584944 MUC13Q9H3R2 512 aa12.52□□□□□ -0.41
TRAF4-215ENST00000584944 TAS2R1Q9NYW7 299 aa12.52□□□□□ -0.41
TRAF4-215ENST00000584944 CHRNA9Q9UGM1 479 aa12.52□□□□□ -0.41
TRAF4-215ENST00000584944 SVILO95425 2214 aa12.52□□□□□ -0.41
TRAF4-215ENST00000584944 M0R3H8 397 aa12.51□□□□□ -0.41
TRAF4-215ENST00000584944 ADAM10O14672 748 aa12.51□□□□□ -0.41
TRAF4-215ENST00000584944 LRRTM2O43300 516 aa12.51□□□□□ -0.41
TRAF4-215ENST00000584944 PDE5AO76074 875 aa12.51□□□□□ -0.41
TRAF4-215ENST00000584944 WISP2O76076 250 aa12.51□□□□□ -0.41
TRAF4-215ENST00000584944 LGI1O95970 557 aa12.51□□□□□ -0.41
TRAF4-215ENST00000584944 OPN1LWP04000 364 aa12.51□□□□□ -0.41
TRAF4-215ENST00000584944 IFNW1P05000 195 aa12.51□□□□□ -0.41
TRAF4-215ENST00000584944 PNMTP11086 282 aa12.51□□□□□ -0.41
TRAF4-215ENST00000584944 PRG2P13727 222 aa12.51□□□□□ -0.41
TRAF4-215ENST00000584944 CPN1P15169 458 aa12.51□□□□□ -0.41
TRAF4-215ENST00000584944 MSX2P35548 267 aaPredicted RBP12.51□□□□□ -0.41
TRAF4-215ENST00000584944 CPOXP36551 454 aa12.51□□□□□ -0.41
TRAF4-215ENST00000584944 CA7P43166 264 aa12.51□□□□□ -0.41
TRAF4-215ENST00000584944 EIF1AXP47813 144 aaKnown RBP12.51□□□□□ -0.41
TRAF4-215ENST00000584944 MAP2K6P52564 334 aa12.51□□□□□ -0.41
TRAF4-215ENST00000584944 TAS2R41P59536 307 aa12.51□□□□□ -0.41
TRAF4-215ENST00000584944 SELENOWP63302 87 aa12.51□□□□□ -0.41
TRAF4-215ENST00000584944 C3AR1Q16581 482 aa12.51□□□□□ -0.41
TRAF4-215ENST00000584944 TMEM176BQ3YBM2 270 aaPredicted RBP12.51□□□□□ -0.41
TRAF4-215ENST00000584944 HBMQ6B0K9 141 aa12.51□□□□□ -0.41
TRAF4-215ENST00000584944 ULK3Q6PHR2 472 aa12.51□□□□□ -0.41
TRAF4-215ENST00000584944 B3GNT6Q6ZMB0 384 aa12.51□□□□□ -0.41
TRAF4-215ENST00000584944 CYP4Z1Q86W10 505 aa12.51□□□□□ -0.41
TRAF4-215ENST00000584944 CARM1Q86X55 608 aa12.51□□□□□ -0.41
TRAF4-215ENST00000584944 DHFR2Q86XF0 187 aa12.51□□□□□ -0.41
TRAF4-215ENST00000584944 ZGRF1Q86YA3 2104 aa12.51□□□□□ -0.41
TRAF4-215ENST00000584944 GEMIN6Q8WXD5 167 aaKnown RBP12.51□□□□□ -0.41
TRAF4-215ENST00000584944 ZHX1-C8orf76Q96EF9 292 aa12.51□□□□□ -0.41
TRAF4-215ENST00000584944 OR5B2Q96R09 309 aa12.51□□□□□ -0.41
TRAF4-215ENST00000584944 MCHR1Q99705 422 aa12.51□□□□□ -0.41
TRAF4-215ENST00000584944 PAQR5Q9NXK6 330 aaPredicted RBP12.51□□□□□ -0.41
TRAF4-215ENST00000584944 GMPR2Q9P2T1 348 aaKnown RBP12.51□□□□□ -0.41
TRAF4-215ENST00000584944 MCTS1Q9ULC4 181 aaKnown RBP12.51□□□□□ -0.41
TRAF4-215ENST00000584944 ZNF835Q9Y2P0 537 aa12.51□□□□□ -0.41
TRAF4-215ENST00000584944 FAM32AQ9Y421 112 aaKnown RBP12.51□□□□□ -0.41
TRAF4-215ENST00000584944 TMED7-TICAM2A0A0A6YYA0 188 aa12.5□□□□□ -0.41
TRAF4-215ENST00000584944 ARPC2O15144 300 aa12.5□□□□□ -0.41
TRAF4-215ENST00000584944 GCM2O75603 506 aaPredicted RBP12.5□□□□□ -0.41
TRAF4-215ENST00000584944 STSP08842 583 aa12.5□□□□□ -0.41
TRAF4-215ENST00000584944 ZNF708P17019 499 aa12.5□□□□□ -0.41
TRAF4-215ENST00000584944 ACAA2P42765 397 aaKnown RBP12.5□□□□□ -0.41
TRAF4-215ENST00000584944 LHX2P50458 406 aa12.5□□□□□ -0.41
TRAF4-215ENST00000584944 CLDN15P56746 228 aa12.5□□□□□ -0.41
TRAF4-215ENST00000584944 CARD18P57730 90 aa12.5□□□□□ -0.41
TRAF4-215ENST00000584944 B3GALT5-AS1P59052 145 aa12.5□□□□□ -0.41
TRAF4-215ENST00000584944 CEACAM7Q14002 265 aa12.5□□□□□ -0.41
TRAF4-215ENST00000584944 GLIPR1L2Q4G1C9 344 aa12.5□□□□□ -0.41
TRAF4-215ENST00000584944 IFI44LQ53G44 452 aa12.5□□□□□ -0.41
TRAF4-215ENST00000584944 ALG10BQ5I7T1 473 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms