RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 HMGCS2P54868 508 aa3.49□□□□□ -1.85
NF1-220ENST00000581113 CLDN8P56748 225 aa3.49□□□□□ -1.85
NF1-220ENST00000581113 MAP3K7CLP57077 242 aa3.49□□□□□ -1.85
NF1-220ENST00000581113 DYNLL1P63167 89 aaKnown RBP3.49□□□□□ -1.85
NF1-220ENST00000581113 ASPHQ12797 758 aa3.49□□□□□ -1.85
NF1-220ENST00000581113 RIGQ13278 110 aa3.49□□□□□ -1.85
NF1-220ENST00000581113 IL18Q14116 193 aa3.49□□□□□ -1.85
NF1-220ENST00000581113 GK2Q14410 553 aaPredicted RBP3.49□□□□□ -1.85
NF1-220ENST00000581113 CARTPTQ16568 116 aa3.49□□□□□ -1.85
NF1-220ENST00000581113 ADPRMQ3LIE5 342 aa3.49□□□□□ -1.85
NF1-220ENST00000581113 LCE3CQ5T5A8 94 aa3.49□□□□□ -1.85
NF1-220ENST00000581113 CARD17Q5XLA6 110 aa3.49□□□□□ -1.85
NF1-220ENST00000581113 ZNF730Q6ZMV8 503 aa3.49□□□□□ -1.85
NF1-220ENST00000581113 TMEM126BQ8IUX1 230 aa3.49□□□□□ -1.85
NF1-220ENST00000581113 THEM5Q8N1Q8 247 aa3.49□□□□□ -1.85
NF1-220ENST00000581113 BCORP1Q8N888 145 aa3.49□□□□□ -1.85
NF1-220ENST00000581113 CCDC12Q8WUD4 166 aaPredicted RBP3.49□□□□□ -1.85
NF1-220ENST00000581113 PCNPQ8WW12 178 aaKnown RBP3.49□□□□□ -1.85
NF1-220ENST00000581113 COQ7Q99807 217 aa3.49□□□□□ -1.85
NF1-220ENST00000581113 FAM213AQ9BRX8 229 aa3.49□□□□□ -1.85
NF1-220ENST00000581113 ALG12Q9BV10 488 aa3.49□□□□□ -1.85
NF1-220ENST00000581113 ANKRA2Q9H9E1 313 aa3.49□□□□□ -1.85
NF1-220ENST00000581113 NMUR1Q9HB89 426 aa3.49□□□□□ -1.85
NF1-220ENST00000581113 RAB18Q9NP72 206 aa3.49□□□□□ -1.85
NF1-220ENST00000581113 LZTFL1Q9NQ48 299 aa3.49□□□□□ -1.85
NF1-220ENST00000581113 NUDT15Q9NV35 164 aa3.49□□□□□ -1.85
NF1-220ENST00000581113 PLEK2Q9NYT0 353 aa3.49□□□□□ -1.85
NF1-220ENST00000581113 THYN1Q9P016 225 aa3.49□□□□□ -1.85
NF1-220ENST00000581113 STX18Q9P2W9 335 aaKnown RBP3.49□□□□□ -1.85
NF1-220ENST00000581113 ZNF346Q9UL40 294 aaKnown RBP3.49□□□□□ -1.85
NF1-220ENST00000581113 TNRC18O15417 2968 aaPredicted RBP3.49□□□□□ -1.85
NF1-220ENST00000581113 MYH2Q9UKX2 1941 aa3.49□□□□□ -1.85
NF1-220ENST00000581113 MYH13Q9UKX3 1938 aa3.49□□□□□ -1.85
NF1-220ENST00000581113 SF3B1O75533 1304 aaKnown RBP eCLIP3.49□□□□□ -1.85
NF1-220ENST00000581113 TRBV5-4A0A0C4DH59 114 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 FAM149AA5PLN7 773 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 RPL37AP8A6NKH3 93 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 GABRR3A8MPY1 467 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 HDAC3O15379 428 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 PHF1O43189 567 aaPredicted RBP3.48□□□□□ -1.85
NF1-220ENST00000581113 RNF13O43567 381 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 CHRNA1P02708 482 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 CHRNGP07510 517 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 NUDT17P0C025 328 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 CPA3P15088 417 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 CYP2B6P20813 491 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 UQCRC2P22695 453 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 FDFT1P37268 417 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 ID1P41134 155 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 LIMK2P53671 638 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 FUT7Q11130 342 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 BTG3Q14201 252 aaPredicted RBP3.48□□□□□ -1.85
NF1-220ENST00000581113 ZNF829Q3KNS6 432 aaPredicted RBP3.48□□□□□ -1.85
NF1-220ENST00000581113 ANKRD55Q3KP44 614 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 BEX5Q5H9J7 111 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 C9orf66Q5T8R8 295 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 ATL3Q6DD88 541 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 SNRNP48Q6IEG0 339 aaKnown RBP3.48□□□□□ -1.85
NF1-220ENST00000581113 SCARA5Q6ZMJ2 495 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 SERINC5Q86VE9 423 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 CACUL1Q86Y37 369 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 SLC39A11Q8N1S5 342 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 CCDC197Q8NCU1 140 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 SPATA4Q8NEY3 305 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 GOLGA5Q8TBA6 731 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 LKAAEAR1Q8TD35 194 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 OR1E3Q8WZA6 343 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 GGHQ92820 318 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 SLCO4A1Q96BD0 722 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 SGK3Q96BR1 496 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 C7orf34Q96L11 122 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 RCHY1Q96PM5 261 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 SPAG8Q99932 426 aaPredicted RBP3.48□□□□□ -1.85
NF1-220ENST00000581113 RBM24Q9BX46 236 aaKnown RBP3.48□□□□□ -1.85
NF1-220ENST00000581113 OSBPL10Q9BXB5 764 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 MAGEF1Q9HAY2 307 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 ZFP14Q9HCL3 533 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 COPS7AQ9UBW8 275 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 PISDQ9UG56 409 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 CRLS1Q9UJA2 301 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 MGAT4AQ9UM21 535 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 DDX19BQ9UMR2 479 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 CHMP2BQ9UQN3 213 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 PRELID1Q9Y255 219 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 FOXA2Q9Y261 457 aaPredicted RBP3.48□□□□□ -1.85
NF1-220ENST00000581113 IFT52Q9Y366 437 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 DOCK2Q92608 1830 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 KIAA0100Q14667 2235 aaKnown RBP3.48□□□□□ -1.85
NF1-220ENST00000581113 AK9Q5TCS8 1911 aa3.48□□□□□ -1.85
NF1-220ENST00000581113 A0A1B0GTH9 108 aa3.47□□□□□ -1.85
NF1-220ENST00000581113 OR5H15A6NDH6 313 aa3.47□□□□□ -1.85
NF1-220ENST00000581113 OR6C65A6NJZ3 312 aa3.47□□□□□ -1.85
NF1-220ENST00000581113 C12orf71A8MTZ7 269 aa3.47□□□□□ -1.85
NF1-220ENST00000581113 PSMD11O00231 422 aa3.47□□□□□ -1.85
NF1-220ENST00000581113 SLC28A1O00337 649 aa3.47□□□□□ -1.85
NF1-220ENST00000581113 SCAMP2O15127 329 aaKnown RBP3.47□□□□□ -1.85
NF1-220ENST00000581113 EIF3HO15372 352 aaKnown RBP eCLIP3.47□□□□□ -1.85
NF1-220ENST00000581113 PSMD3O43242 534 aa3.47□□□□□ -1.85
NF1-220ENST00000581113 CDH16O75309 829 aa3.47□□□□□ -1.85
NF1-220ENST00000581113 NDUFS6O75380 124 aaKnown RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms