RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 ZNF300Q96RE9 604 aaPredicted RBP16.96■□□□□ 0.31
CDKN2A-213ENST00000579122 INTS9Q9NV88 658 aaKnown RBP16.96■□□□□ 0.31
CDKN2A-213ENST00000579122 SVEP1Q4LDE5 3571 aa16.95■□□□□ 0.3
CDKN2A-213ENST00000579122 IGHV4-30-2A0A087WSY4 118 aa16.95■□□□□ 0.3
CDKN2A-213ENST00000579122 A0A096LNT2 108 aa16.95■□□□□ 0.3
CDKN2A-213ENST00000579122 OR5H1A6NKK0 313 aa16.95■□□□□ 0.3
CDKN2A-213ENST00000579122 GPRIN2O60269 458 aa16.95■□□□□ 0.3
CDKN2A-213ENST00000579122 H6PDO95479 791 aa16.95■□□□□ 0.3
CDKN2A-213ENST00000579122 BPGMP07738 259 aa16.95■□□□□ 0.3
CDKN2A-213ENST00000579122 FGF4P08620 206 aa16.95■□□□□ 0.3
CDKN2A-213ENST00000579122 NUDT6P53370 316 aa16.95■□□□□ 0.3
CDKN2A-213ENST00000579122 GYS2P54840 703 aa16.95■□□□□ 0.3
CDKN2A-213ENST00000579122 DSCR9P59020 149 aa16.95■□□□□ 0.3
CDKN2A-213ENST00000579122 PCLAFQ15004 111 aa16.95■□□□□ 0.3
CDKN2A-213ENST00000579122 LSM12Q3MHD2 195 aaKnown RBP16.95■□□□□ 0.3
CDKN2A-213ENST00000579122 SPDYE7PQ495Y7 208 aa16.95■□□□□ 0.3
CDKN2A-213ENST00000579122 TIGD2Q4W5G0 525 aa16.95■□□□□ 0.3
CDKN2A-213ENST00000579122 C6orf52Q5T4I8 152 aa16.95■□□□□ 0.3
CDKN2A-213ENST00000579122 ZNF100Q8IYN0 542 aa16.95■□□□□ 0.3
CDKN2A-213ENST00000579122 ZNF433Q8N7K0 673 aaPredicted RBP16.95■□□□□ 0.3
CDKN2A-213ENST00000579122 OR10H5Q8NGA6 315 aa16.95■□□□□ 0.3
CDKN2A-213ENST00000579122 SFXN5Q8TD22 340 aa16.95■□□□□ 0.3
CDKN2A-213ENST00000579122 TWIST2Q8WVJ9 160 aa16.95■□□□□ 0.3
CDKN2A-213ENST00000579122 OR5B2Q96R09 309 aa16.95■□□□□ 0.3
CDKN2A-213ENST00000579122 ATAD3AQ9NVI7 634 aa16.95■□□□□ 0.3
CDKN2A-213ENST00000579122 MGAT4BQ9UQ53 548 aa16.95■□□□□ 0.3
CDKN2A-213ENST00000579122 WDR91A4D1P6 747 aa16.94■□□□□ 0.3
CDKN2A-213ENST00000579122 PIP5K1BO14986 540 aa16.94■□□□□ 0.3
CDKN2A-213ENST00000579122 TRIM13O60858 407 aa16.94■□□□□ 0.3
CDKN2A-213ENST00000579122 DNAJA2O60884 412 aa16.94■□□□□ 0.3
CDKN2A-213ENST00000579122 FAM157CP0CG43 387 aa16.94■□□□□ 0.3
CDKN2A-213ENST00000579122 TTKP33981 857 aa16.94■□□□□ 0.3
CDKN2A-213ENST00000579122 CCR4P51679 360 aa16.94■□□□□ 0.3
CDKN2A-213ENST00000579122 IRX1P78414 480 aaPredicted RBP16.94■□□□□ 0.3
CDKN2A-213ENST00000579122 UGT3A2Q3SY77 523 aa16.94■□□□□ 0.3
CDKN2A-213ENST00000579122 C11orf71Q6IPW1 123 aa16.94■□□□□ 0.3
CDKN2A-213ENST00000579122 CLEC2AQ6UVW9 174 aa16.94■□□□□ 0.3
CDKN2A-213ENST00000579122 TMEM108Q6UXF1 575 aa16.94■□□□□ 0.3
CDKN2A-213ENST00000579122 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.94■□□□□ 0.3
CDKN2A-213ENST00000579122 ST8SIA1Q92185 356 aa16.94■□□□□ 0.3
CDKN2A-213ENST00000579122 PPP3R2Q96LZ3 170 aa16.94■□□□□ 0.3
CDKN2A-213ENST00000579122 OR7D2Q96RA2 312 aa16.94■□□□□ 0.3
CDKN2A-213ENST00000579122 MECRQ9BV79 373 aa16.94■□□□□ 0.3
CDKN2A-213ENST00000579122 CACNG6Q9BXT2 260 aa16.94■□□□□ 0.3
CDKN2A-213ENST00000579122 NMUR2Q9GZQ4 415 aa16.94■□□□□ 0.3
CDKN2A-213ENST00000579122 LAT2Q9GZY6 243 aa16.94■□□□□ 0.3
CDKN2A-213ENST00000579122 SERINC1Q9NRX5 453 aa16.94■□□□□ 0.3
CDKN2A-213ENST00000579122 CBLN4Q9NTU7 201 aa16.94■□□□□ 0.3
CDKN2A-213ENST00000579122 CDC42EP3Q9UKI2 254 aa16.94■□□□□ 0.3
CDKN2A-213ENST00000579122 TRAF6Q9Y4K3 522 aa16.94■□□□□ 0.3
CDKN2A-213ENST00000579122 IGKV3D-15A0A087WSY6 115 aa16.93■□□□□ 0.3
CDKN2A-213ENST00000579122 FAM234BA2RU67 622 aa16.93■□□□□ 0.3
CDKN2A-213ENST00000579122 SERINC4A6NH21 518 aa16.93■□□□□ 0.3
CDKN2A-213ENST00000579122 TMEM233B4DJY2 109 aa16.93■□□□□ 0.3
CDKN2A-213ENST00000579122 BIRC5O15392 142 aa16.93■□□□□ 0.3
CDKN2A-213ENST00000579122 LYPLA1O75608 230 aaPredicted RBP16.93■□□□□ 0.3
CDKN2A-213ENST00000579122 C6orf47O95873 294 aa16.93■□□□□ 0.3
CDKN2A-213ENST00000579122 PTNP21246 168 aa16.93■□□□□ 0.3
CDKN2A-213ENST00000579122 ALDH3A1P30838 453 aa16.93■□□□□ 0.3
CDKN2A-213ENST00000579122 DIO1P49895 249 aa16.93■□□□□ 0.3
CDKN2A-213ENST00000579122 CSNK2A1P68400 391 aaPredicted RBP16.93■□□□□ 0.3
CDKN2A-213ENST00000579122 LOXL1Q08397 574 aaPredicted RBP16.93■□□□□ 0.3
CDKN2A-213ENST00000579122 SKP2Q13309 424 aa16.93■□□□□ 0.3
CDKN2A-213ENST00000579122 PDK3Q15120 406 aa16.93■□□□□ 0.3
CDKN2A-213ENST00000579122 TMEM249Q2WGJ8 235 aa16.93■□□□□ 0.3
CDKN2A-213ENST00000579122 PDZK1Q5T2W1 519 aa16.93■□□□□ 0.3
CDKN2A-213ENST00000579122 ABLIM2Q6H8Q1 611 aa16.93■□□□□ 0.3
CDKN2A-213ENST00000579122 TMPPEQ6ZT21 453 aa16.93■□□□□ 0.3
CDKN2A-213ENST00000579122 NUDCD3Q8IVD9 361 aa16.93■□□□□ 0.3
CDKN2A-213ENST00000579122 DYDC1Q8WWB3 177 aa16.93■□□□□ 0.3
CDKN2A-213ENST00000579122 COQ8BQ96D53 544 aa16.93■□□□□ 0.3
CDKN2A-213ENST00000579122 TNFRSF13CQ96RJ3 184 aa16.93■□□□□ 0.3
CDKN2A-213ENST00000579122 SDF2Q99470 211 aa16.93■□□□□ 0.3
CDKN2A-213ENST00000579122 DHRS9Q9BPW9 319 aa16.93■□□□□ 0.3
CDKN2A-213ENST00000579122 THUMPD3Q9BV44 507 aaKnown RBP16.93■□□□□ 0.3
CDKN2A-213ENST00000579122 QRSL1Q9H0R6 528 aaKnown RBP16.93■□□□□ 0.3
CDKN2A-213ENST00000579122 EMC3Q9P0I2 261 aa16.93■□□□□ 0.3
CDKN2A-213ENST00000579122 ELOA3DA6NLF2 546 aaPredicted RBP16.92■□□□□ 0.3
CDKN2A-213ENST00000579122 E7EQL1 145 aa16.92■□□□□ 0.3
CDKN2A-213ENST00000579122 PHF1O43189 567 aaPredicted RBP16.92■□□□□ 0.3
CDKN2A-213ENST00000579122 CHRNGP07510 517 aa16.92■□□□□ 0.3
CDKN2A-213ENST00000579122 PTAFRP25105 342 aa16.92■□□□□ 0.3
CDKN2A-213ENST00000579122 MDH1P40925 334 aaKnown RBP16.92■□□□□ 0.3
CDKN2A-213ENST00000579122 VLDLRP98155 873 aa16.92■□□□□ 0.3
CDKN2A-213ENST00000579122 PTGR1Q14914 329 aa16.92■□□□□ 0.3
CDKN2A-213ENST00000579122 ZNF141Q15928 474 aa16.92■□□□□ 0.3
CDKN2A-213ENST00000579122 ELOA3BQ3SY89 546 aa16.92■□□□□ 0.3
CDKN2A-213ENST00000579122 XKR7Q5GH72 579 aa16.92■□□□□ 0.3
CDKN2A-213ENST00000579122 FBXW9Q5XUX1 488 aa16.92■□□□□ 0.3
CDKN2A-213ENST00000579122 BHLHB9Q6PI77 547 aa16.92■□□□□ 0.3
CDKN2A-213ENST00000579122 SLC22A25Q6T423 547 aa16.92■□□□□ 0.3
CDKN2A-213ENST00000579122 KLHL17Q6TDP4 642 aa16.92■□□□□ 0.3
CDKN2A-213ENST00000579122 MTDHQ86UE4 582 aaKnown RBP16.92■□□□□ 0.3
CDKN2A-213ENST00000579122 ELOA3Q8NG57 546 aa16.92■□□□□ 0.3
CDKN2A-213ENST00000579122 OR5D16Q8NGK9 328 aa16.92■□□□□ 0.3
CDKN2A-213ENST00000579122 SLC25A43Q8WUT9 341 aaPredicted RBP16.92■□□□□ 0.3
CDKN2A-213ENST00000579122 TMEM234Q8WY98 164 aa16.92■□□□□ 0.3
CDKN2A-213ENST00000579122 PRPF18Q99633 342 aaKnown RBP16.92■□□□□ 0.3
CDKN2A-213ENST00000579122 TMEM160Q9NX00 188 aa16.92■□□□□ 0.3
CDKN2A-213ENST00000579122 GIMAP2Q9UG22 337 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms