RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 KCNS3Q9BQ31 491 aa9.44□□□□□ -0.9
GGA3-206ENST00000578773 ZNF442Q9H7R0 627 aa9.44□□□□□ -0.9
GGA3-206ENST00000578773 IPPKQ9H8X2 491 aa9.44□□□□□ -0.9
GGA3-206ENST00000578773 PLEK2Q9NYT0 353 aa9.44□□□□□ -0.9
GGA3-206ENST00000578773 DCTN4Q9UJW0 460 aa9.44□□□□□ -0.9
GGA3-206ENST00000578773 PSME2Q9UL46 239 aa9.44□□□□□ -0.9
GGA3-206ENST00000578773 C19orf53Q9UNZ5 99 aaPredicted RBP9.44□□□□□ -0.9
GGA3-206ENST00000578773 ANGPTL3Q9Y5C1 460 aa9.44□□□□□ -0.9
GGA3-206ENST00000578773 CLPSL1A2RUU4 121 aa9.43□□□□□ -0.9
GGA3-206ENST00000578773 ZNF503-AS2A6NEH8 195 aa9.43□□□□□ -0.9
GGA3-206ENST00000578773 OR6C65A6NJZ3 312 aa9.43□□□□□ -0.9
GGA3-206ENST00000578773 H0YL77 283 aa9.43□□□□□ -0.9
GGA3-206ENST00000578773 CCDC188H7C350 402 aa9.43□□□□□ -0.9
GGA3-206ENST00000578773 COQ9O75208 318 aa9.43□□□□□ -0.9
GGA3-206ENST00000578773 SEC14L2O76054 403 aa9.43□□□□□ -0.9
GGA3-206ENST00000578773 NUDT14O95848 222 aa9.43□□□□□ -0.9
GGA3-206ENST00000578773 MBD3O95983 291 aa9.43□□□□□ -0.9
GGA3-206ENST00000578773 NGFP01138 241 aa9.43□□□□□ -0.9
GGA3-206ENST00000578773 IGHV4-38-2P0DP08 117 aa9.43□□□□□ -0.9
GGA3-206ENST00000578773 CHN1P15882 459 aa9.43□□□□□ -0.9
GGA3-206ENST00000578773 EIF1P41567 113 aaKnown RBP9.43□□□□□ -0.9
GGA3-206ENST00000578773 ATP6V0D1P61421 351 aa9.43□□□□□ -0.9
GGA3-206ENST00000578773 COL10A1Q03692 680 aa9.43□□□□□ -0.9
GGA3-206ENST00000578773 SELENBP1Q13228 472 aa9.43□□□□□ -0.9
GGA3-206ENST00000578773 HLXQ14774 488 aaPredicted RBP9.43□□□□□ -0.9
GGA3-206ENST00000578773 ALKBH6Q3KRA9 238 aa9.43□□□□□ -0.9
GGA3-206ENST00000578773 TBRG1Q3YBR2 411 aa9.43□□□□□ -0.9
GGA3-206ENST00000578773 OXLD1Q5BKU9 147 aa9.43□□□□□ -0.9
GGA3-206ENST00000578773 SAXO2Q658L1 398 aa9.43□□□□□ -0.9
GGA3-206ENST00000578773 KRT80Q6KB66 452 aa9.43□□□□□ -0.9
GGA3-206ENST00000578773 RPS27LQ71UM5 84 aaKnown RBP9.43□□□□□ -0.9
GGA3-206ENST00000578773 REC114Q7Z4M0 266 aa9.43□□□□□ -0.9
GGA3-206ENST00000578773 ANKMY2Q8IV38 441 aa9.43□□□□□ -0.9
GGA3-206ENST00000578773 PPIL6Q8IXY8 311 aa9.43□□□□□ -0.9
GGA3-206ENST00000578773 OR4F5Q8NH21 305 aa9.43□□□□□ -0.9
GGA3-206ENST00000578773 CEP70Q8NHQ1 597 aa9.43□□□□□ -0.9
GGA3-206ENST00000578773 GPR119Q8TDV5 335 aa9.43□□□□□ -0.9
GGA3-206ENST00000578773 NSUN5Q96P11 429 aaKnown RBP9.43□□□□□ -0.9
GGA3-206ENST00000578773 SYT3Q9BQG1 590 aa9.43□□□□□ -0.9
GGA3-206ENST00000578773 NELFAQ9H3P2 528 aa9.43□□□□□ -0.9
GGA3-206ENST00000578773 RHOJQ9H4E5 214 aa9.43□□□□□ -0.9
GGA3-206ENST00000578773 SLC35C2Q9NQQ7 365 aa9.43□□□□□ -0.9
GGA3-206ENST00000578773 REV1Q9UBZ9 1251 aa9.43□□□□□ -0.9
GGA3-206ENST00000578773 KLHL21Q9UJP4 597 aa9.43□□□□□ -0.9
GGA3-206ENST00000578773 FZR1Q9UM11 496 aa9.43□□□□□ -0.9
GGA3-206ENST00000578773 CARD8Q9Y2G2 431 aa9.43□□□□□ -0.9
GGA3-206ENST00000578773 CACNG2Q9Y698 323 aa9.43□□□□□ -0.9
GGA3-206ENST00000578773 IGHV2OR16-5A0A0B4J2B6 119 aa9.42□□□□□ -0.9
GGA3-206ENST00000578773 GJE1A6NN92 205 aa9.42□□□□□ -0.9
GGA3-206ENST00000578773 CXorf49A8MYA2 514 aaPredicted RBP9.42□□□□□ -0.9
GGA3-206ENST00000578773 MRPL33O75394 65 aaKnown RBP9.42□□□□□ -0.9
GGA3-206ENST00000578773 WNT11O96014 354 aa9.42□□□□□ -0.9
GGA3-206ENST00000578773 PDYNP01213 254 aa9.42□□□□□ -0.9
GGA3-206ENST00000578773 IGLV1-44P01699 117 aa9.42□□□□□ -0.9
GGA3-206ENST00000578773 NGFRP08138 427 aa9.42□□□□□ -0.9
GGA3-206ENST00000578773 ACP2P11117 423 aa9.42□□□□□ -0.9
GGA3-206ENST00000578773 TIA1P31483 386 aaKnown RBP eCLIP9.42□□□□□ -0.9
GGA3-206ENST00000578773 CXCR5P32302 372 aa9.42□□□□□ -0.9
GGA3-206ENST00000578773 MAGEB1P43366 347 aa9.42□□□□□ -0.9
GGA3-206ENST00000578773 MGAT5Q09328 741 aa9.42□□□□□ -0.9
GGA3-206ENST00000578773 SNTB2Q13425 540 aaKnown RBP9.42□□□□□ -0.9
GGA3-206ENST00000578773 FASTKD3Q14CZ7 662 aaKnown RBP9.42□□□□□ -0.9
GGA3-206ENST00000578773 SLC9B1Q4ZJI4 515 aa9.42□□□□□ -0.9
GGA3-206ENST00000578773 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.42□□□□□ -0.9
GGA3-206ENST00000578773 FRG2Q64ET8 278 aa9.42□□□□□ -0.9
GGA3-206ENST00000578773 KLHL24Q6TFL4 600 aa9.42□□□□□ -0.9
GGA3-206ENST00000578773 FIP1L1Q6UN15 594 aaKnown RBP9.42□□□□□ -0.9
GGA3-206ENST00000578773 LINGO2Q7L985 606 aa9.42□□□□□ -0.9
GGA3-206ENST00000578773 CMC1Q7Z7K0 106 aa9.42□□□□□ -0.9
GGA3-206ENST00000578773 OR2L13Q8N349 312 aa9.42□□□□□ -0.9
GGA3-206ENST00000578773 RFWD2Q8NHY2 731 aa9.42□□□□□ -0.9
GGA3-206ENST00000578773 GPR151Q8TDV0 419 aa9.42□□□□□ -0.9
GGA3-206ENST00000578773 FRG2BQ96QU4 278 aa9.42□□□□□ -0.9
GGA3-206ENST00000578773 FAIM2Q9BWQ8 316 aa9.42□□□□□ -0.9
GGA3-206ENST00000578773 NOL11Q9H8H0 719 aaKnown RBP9.42□□□□□ -0.9
GGA3-206ENST00000578773 MARCH7Q9H992 704 aa9.42□□□□□ -0.9
GGA3-206ENST00000578773 TCF7L1Q9HCS4 588 aa9.42□□□□□ -0.9
GGA3-206ENST00000578773 EMC3Q9P0I2 261 aa9.42□□□□□ -0.9
GGA3-206ENST00000578773 CRNNQ9UBG3 495 aaPredicted RBP9.42□□□□□ -0.9
GGA3-206ENST00000578773 UPB1Q9UBR1 384 aa9.42□□□□□ -0.9
GGA3-206ENST00000578773 ZKSCAN5Q9Y2L8 839 aa9.42□□□□□ -0.9
GGA3-206ENST00000578773 ACOT9Q9Y305 439 aa9.42□□□□□ -0.9
GGA3-206ENST00000578773 RNF114Q9Y508 228 aa9.42□□□□□ -0.9
GGA3-206ENST00000578773 NUP214P35658 2090 aaPredicted RBP9.41□□□□□ -0.9
GGA3-206ENST00000578773 A0A087WV62 115 aa9.41□□□□□ -0.9
GGA3-206ENST00000578773 A0A096LPE4 126 aa9.41□□□□□ -0.9
GGA3-206ENST00000578773 A0A1W2PPZ6 126 aa9.41□□□□□ -0.9
GGA3-206ENST00000578773 MYO1GB0I1T2 1018 aa9.41□□□□□ -0.9
GGA3-206ENST00000578773 TRIM49D1C9J1S8 452 aa9.41□□□□□ -0.9
GGA3-206ENST00000578773 KIF2AO00139 706 aaPredicted RBP9.41□□□□□ -0.9
GGA3-206ENST00000578773 FRS3O43559 492 aa9.41□□□□□ -0.9
GGA3-206ENST00000578773 GUCY1B2O75343 617 aa9.41□□□□□ -0.9
GGA3-206ENST00000578773 KCNK2O95069 426 aa9.41□□□□□ -0.9
GGA3-206ENST00000578773 KCNH1O95259 989 aa9.41□□□□□ -0.9
GGA3-206ENST00000578773 LGI1O95970 557 aa9.41□□□□□ -0.9
GGA3-206ENST00000578773 NAT2P11245 290 aa9.41□□□□□ -0.9
GGA3-206ENST00000578773 ANPEPP15144 967 aa9.41□□□□□ -0.9
GGA3-206ENST00000578773 ARL1P40616 181 aaPredicted RBP9.41□□□□□ -0.9
GGA3-206ENST00000578773 MAP3K8P41279 467 aa9.41□□□□□ -0.9
GGA3-206ENST00000578773 NCBP2P52298 156 aaKnown RBP eCLIP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 170 ms