RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 ZNF300Q96RE9 604 aaPredicted RBP10.98□□□□□ -0.65
IFT20-207ENST00000578547 FNDC11Q9BVV2 318 aa10.98□□□□□ -0.65
IFT20-207ENST00000578547 CHID1Q9BWS9 393 aa10.98□□□□□ -0.65
IFT20-207ENST00000578547 IL1RAPQ9NPH3 570 aa10.98□□□□□ -0.65
IFT20-207ENST00000578547 AGPAT4Q9NRZ5 378 aa10.98□□□□□ -0.65
IFT20-207ENST00000578547 ASF1BQ9NVP2 202 aa10.98□□□□□ -0.65
IFT20-207ENST00000578547 TNFRSF10DQ9UBN6 386 aa10.98□□□□□ -0.65
IFT20-207ENST00000578547 RIMS3Q9UJD0 308 aa10.98□□□□□ -0.65
IFT20-207ENST00000578547 A4GNTQ9UNA3 340 aa10.98□□□□□ -0.65
IFT20-207ENST00000578547 TESMINQ9Y4I5 508 aa10.98□□□□□ -0.65
IFT20-207ENST00000578547 COL6A6A6NMZ7 2263 aa10.98□□□□□ -0.65
IFT20-207ENST00000578547 TMED7-TICAM2A0A0A6YYA0 188 aa10.97□□□□□ -0.65
IFT20-207ENST00000578547 A0A0B4J2E0 115 aa10.97□□□□□ -0.65
IFT20-207ENST00000578547 A0A1B0GX12 115 aa10.97□□□□□ -0.65
IFT20-207ENST00000578547 C7orf72A4D263 438 aa10.97□□□□□ -0.65
IFT20-207ENST00000578547 TIPRLO75663 272 aa10.97□□□□□ -0.65
IFT20-207ENST00000578547 OR5F1O95221 314 aa10.97□□□□□ -0.65
IFT20-207ENST00000578547 NTN1O95631 604 aa10.97□□□□□ -0.65
IFT20-207ENST00000578547 ZNF17P17021 662 aa10.97□□□□□ -0.65
IFT20-207ENST00000578547 POU3F2P20265 443 aaPredicted RBP10.97□□□□□ -0.65
IFT20-207ENST00000578547 CXCR1P25024 350 aa10.97□□□□□ -0.65
IFT20-207ENST00000578547 IFNA8P32881 189 aa10.97□□□□□ -0.65
IFT20-207ENST00000578547 HTR3AP46098 478 aa10.97□□□□□ -0.65
IFT20-207ENST00000578547 B3GALT5-AS1P59052 145 aa10.97□□□□□ -0.65
IFT20-207ENST00000578547 TMEM44Q2T9K0 475 aa10.97□□□□□ -0.65
IFT20-207ENST00000578547 SLC25A53Q5H9E4 307 aa10.97□□□□□ -0.65
IFT20-207ENST00000578547 FGD3Q5JSP0 725 aa10.97□□□□□ -0.65
IFT20-207ENST00000578547 AAGABQ6PD74 315 aa10.97□□□□□ -0.65
IFT20-207ENST00000578547 ZNF613Q6PF04 617 aa10.97□□□□□ -0.65
IFT20-207ENST00000578547 ULK3Q6PHR2 472 aa10.97□□□□□ -0.65
IFT20-207ENST00000578547 TRILQ7L0X0 811 aa10.97□□□□□ -0.65
IFT20-207ENST00000578547 GDF7Q7Z4P5 450 aa10.97□□□□□ -0.65
IFT20-207ENST00000578547 UBQLNLQ8IYU4 475 aa10.97□□□□□ -0.65
IFT20-207ENST00000578547 LSMEM1Q8N8F7 131 aa10.97□□□□□ -0.65
IFT20-207ENST00000578547 NEIL3Q8TAT5 605 aa10.97□□□□□ -0.65
IFT20-207ENST00000578547 FAR1Q8WVX9 515 aa10.97□□□□□ -0.65
IFT20-207ENST00000578547 STMN2Q93045 179 aa10.97□□□□□ -0.65
IFT20-207ENST00000578547 SLCO4A1Q96BD0 722 aa10.97□□□□□ -0.65
IFT20-207ENST00000578547 DNAJA3Q96EY1 480 aa10.97□□□□□ -0.65
IFT20-207ENST00000578547 PIP5K1AQ99755 562 aa10.97□□□□□ -0.65
IFT20-207ENST00000578547 ACKR4Q9NPB9 350 aa10.97□□□□□ -0.65
IFT20-207ENST00000578547 SERINC1Q9NRX5 453 aa10.97□□□□□ -0.65
IFT20-207ENST00000578547 CCM2LQ9NUG4 571 aaPredicted RBP10.97□□□□□ -0.65
IFT20-207ENST00000578547 OSGIN1Q9UJX0 560 aa10.97□□□□□ -0.65
IFT20-207ENST00000578547 TMED7Q9Y3B3 224 aa10.97□□□□□ -0.65
IFT20-207ENST00000578547 MRPS18CQ9Y3D5 142 aaKnown RBP10.97□□□□□ -0.65
IFT20-207ENST00000578547 PCNX3Q9H6A9 2034 aa10.97□□□□□ -0.65
IFT20-207ENST00000578547 EIF4E1BA6NMX2 242 aaKnown RBP10.96□□□□□ -0.65
IFT20-207ENST00000578547 B8ZZF3 427 aa10.96□□□□□ -0.65
IFT20-207ENST00000578547 ETV2O00321 342 aaPredicted RBP10.96□□□□□ -0.65
IFT20-207ENST00000578547 FFAR1O14842 300 aa10.96□□□□□ -0.65
IFT20-207ENST00000578547 ZNHIT1O43257 154 aa10.96□□□□□ -0.65
IFT20-207ENST00000578547 SEC14L5O43304 696 aa10.96□□□□□ -0.65
IFT20-207ENST00000578547 CHP2O43745 196 aa10.96□□□□□ -0.65
IFT20-207ENST00000578547 SUSD5O60279 629 aa10.96□□□□□ -0.65
IFT20-207ENST00000578547 THY1P04216 161 aa10.96□□□□□ -0.65
IFT20-207ENST00000578547 TFPIP10646 304 aa10.96□□□□□ -0.65
IFT20-207ENST00000578547 RHCEP18577 417 aa10.96□□□□□ -0.65
IFT20-207ENST00000578547 FUT4P22083 530 aa10.96□□□□□ -0.65
IFT20-207ENST00000578547 ELK4P28324 431 aa10.96□□□□□ -0.65
IFT20-207ENST00000578547 SLC7A1P30825 629 aa10.96□□□□□ -0.65
IFT20-207ENST00000578547 RRM2P31350 389 aa10.96□□□□□ -0.65
IFT20-207ENST00000578547 SFTPDP35247 375 aa10.96□□□□□ -0.65
IFT20-207ENST00000578547 APOBEC1P41238 236 aaKnown RBP10.96□□□□□ -0.65
IFT20-207ENST00000578547 MAGEA2P43356 314 aa10.96□□□□□ -0.65
IFT20-207ENST00000578547 STARP49675 285 aa10.96□□□□□ -0.65
IFT20-207ENST00000578547 GFRA1P56159 465 aa10.96□□□□□ -0.65
IFT20-207ENST00000578547 SELENBP1Q13228 472 aa10.96□□□□□ -0.65
IFT20-207ENST00000578547 C3AR1Q16581 482 aa10.96□□□□□ -0.65
IFT20-207ENST00000578547 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.96□□□□□ -0.65
IFT20-207ENST00000578547 GLYR1Q49A26 553 aaPredicted RBP10.96□□□□□ -0.65
IFT20-207ENST00000578547 DCST1Q5T197 706 aa10.96□□□□□ -0.65
IFT20-207ENST00000578547 C3orf33Q6P1S2 294 aa10.96□□□□□ -0.65
IFT20-207ENST00000578547 ATG4DQ86TL0 474 aaPredicted RBP10.96□□□□□ -0.65
IFT20-207ENST00000578547 P3H2Q8IVL5 708 aa10.96□□□□□ -0.65
IFT20-207ENST00000578547 OFCC1Q8IZS5 231 aa10.96□□□□□ -0.65
IFT20-207ENST00000578547 OR52J3Q8NH60 311 aa10.96□□□□□ -0.65
IFT20-207ENST00000578547 CPT1CQ8TCG5 803 aa10.96□□□□□ -0.65
IFT20-207ENST00000578547 DNAJA4Q8WW22 397 aaPredicted RBP10.96□□□□□ -0.65
IFT20-207ENST00000578547 ABTB1Q969K4 478 aaPredicted RBP10.96□□□□□ -0.65
IFT20-207ENST00000578547 GPR137Q96N19 417 aa10.96□□□□□ -0.65
IFT20-207ENST00000578547 ZNF347Q96SE7 839 aa10.96□□□□□ -0.65
IFT20-207ENST00000578547 BARD1Q99728 777 aaKnown RBP10.96□□□□□ -0.65
IFT20-207ENST00000578547 POLR2J2Q9GZM3 115 aaKnown RBP10.96□□□□□ -0.65
IFT20-207ENST00000578547 ADAM19Q9H013 955 aa10.96□□□□□ -0.65
IFT20-207ENST00000578547 POLR2J3Q9H1A7 115 aaKnown RBP10.96□□□□□ -0.65
IFT20-207ENST00000578547 YY1AP1Q9H869 796 aa10.96□□□□□ -0.65
IFT20-207ENST00000578547 SPRR3Q9UBC9 169 aa10.96□□□□□ -0.65
IFT20-207ENST00000578547 CHRNA9Q9UGM1 479 aa10.96□□□□□ -0.65
IFT20-207ENST00000578547 ZNF337Q9Y3M9 751 aa10.96□□□□□ -0.65
IFT20-207ENST00000578547 AP4S1Q9Y587 144 aa10.96□□□□□ -0.65
IFT20-207ENST00000578547 A0A1B0GTH9 108 aa10.95□□□□□ -0.66
IFT20-207ENST00000578547 TMEM72A0PK05 275 aa10.95□□□□□ -0.66
IFT20-207ENST00000578547 H0YHG0 523 aa10.95□□□□□ -0.66
IFT20-207ENST00000578547 KPNA4O00629 521 aaPredicted RBP10.95□□□□□ -0.66
IFT20-207ENST00000578547 GNGT2O14610 69 aa10.95□□□□□ -0.66
IFT20-207ENST00000578547 EFNA2O43921 213 aa10.95□□□□□ -0.66
IFT20-207ENST00000578547 HCN1O60741 890 aa10.95□□□□□ -0.66
IFT20-207ENST00000578547 KRT36O76013 467 aa10.95□□□□□ -0.66
IFT20-207ENST00000578547 PRSS23O95084 383 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms