RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	DSPP	Q9NZW4	1301 aa		3.91	□□□□□ -1.78
PPP4R1-209	ENST00000578329	TLDC2	A0PJX2	215 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	TMEM72	A0PK05	275 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	SLC35F4	A4IF30	521 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	CCDC151	A5D8V7	595 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	OR5H1	A6NKK0	313 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	ZNF724	A8MTY0	619 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	VWC2L	B2RUY7	222 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	RNASET2	O00584	256 aa	Known RBP	3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	SCD	O00767	359 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	ZNF264	O43296	627 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	ARHGEF9	O43307	516 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	EIF4E2	O60573	245 aa	Known RBP	3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	NPIPB7	O75200	414 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	PRKD3	O94806	890 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	NUDT7	P0C024	238 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	UBTFL6	P0CB48	400 aa	Predicted RBP	3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	UBL4A	P11441	157 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	PRPS1L1	P21108	318 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	GCK	P35557	465 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	EIF1	P41567	113 aa	Known RBP	3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	ZNF41	P51814	821 aa	Predicted RBP	3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	PSMD4	P55036	377 aa	Known RBP	3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	CTBP2	P56545	445 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	RPS3A	P61247	264 aa	Known RBP	3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	NAA20	P61599	178 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	UFM1	P61960	85 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	EGR4	Q05215	589 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	FAP	Q12884	760 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	SELENBP1	Q13228	472 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	ITGAD	Q13349	1161 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	SLC17A1	Q14916	467 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	PDK3	Q15120	406 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	RNPS1	Q15287	305 aa	Known RBP	3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	ZNHIT3	Q15649	155 aa	Predicted RBP	3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	GPR68	Q15743	365 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	PDCD2	Q16342	344 aa	Predicted RBP	3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	CLEC12B	Q2HXU8	276 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	SYT14P1	Q58G82	188 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	CFAP157	Q5JU67	520 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	TSPO2	Q5TGU0	170 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	FBXW10	Q5XX13	1052 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	ALKBH2	Q6NS38	261 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	TMPPE	Q6ZT21	453 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	BEND4	Q6ZU67	534 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	BHLHA15	Q7RTS1	189 aa	Predicted RBP	3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	TSPYL5	Q86VY4	417 aa	Predicted RBP	3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	MISP	Q8IVT2	679 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	MSRB3	Q8IXL7	192 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	ARIH2OS	Q8N7S6	290 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	OR56A1	Q8NGH5	318 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	ZFP28	Q8NHY6	868 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	JADE3	Q92613	823 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	CPNE4	Q96A23	557 aa	Predicted RBP	3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	TESC	Q96BS2	214 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	ROPN1L	Q96C74	230 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	ZNF837	Q96EG3	531 aa	Predicted RBP	3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	NEURL3	Q96EH8	262 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	BOD1	Q96IK1	185 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	PPP3R2	Q96LZ3	170 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	ZNF75A	Q96N20	296 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	CCDC115	Q96NT0	180 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	ZNF385A	Q96PM9	386 aa	Known RBP	3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	OR5B2	Q96R09	309 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	BDH2	Q9BUT1	245 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	PTDSS2	Q9BVG9	487 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	C1QTNF6	Q9BXI9	259 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	POTEKP	Q9BYX7	375 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	GRIP2	Q9C0E4	1043 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	ADAM19	Q9H013	955 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	HEATR1	Q9H583	2144 aa	Known RBP	3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	C3orf14	Q9HBI5	128 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	SEC14L4	Q9UDX3	406 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	MALT1	Q9UDY8	824 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	OSGIN1	Q9UJX0	560 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	MCTS1	Q9ULC4	181 aa	Known RBP	3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	EMC9	Q9Y3B6	208 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	SNX8	Q9Y5X2	465 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	FLVCR1	Q9Y5Y0	555 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	GPR45	Q9Y5Y3	372 aa		3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329		V9GYY5	206 aa	Predicted RBP	3.9	□□□□□ -1.79
PPP4R1-209	ENST00000578329	MEGF8	Q7Z7M0	2845 aa		3.89	□□□□□ -1.79
PPP4R1-209	ENST00000578329	PKD1L1	Q8TDX9	2849 aa		3.89	□□□□□ -1.79
PPP4R1-209	ENST00000578329	IGKV1D-42	A0A075B6H8	117 aa		3.89	□□□□□ -1.79
PPP4R1-209	ENST00000578329	RNF103-CHMP3	A0A140T963	221 aa		3.89	□□□□□ -1.79
PPP4R1-209	ENST00000578329	TMEM129	A0AVI4	362 aa		3.89	□□□□□ -1.79
PPP4R1-209	ENST00000578329	WDR91	A4D1P6	747 aa		3.89	□□□□□ -1.79
PPP4R1-209	ENST00000578329	AGAP5	A6NIR3	686 aa		3.89	□□□□□ -1.79
PPP4R1-209	ENST00000578329	ELOA3D	A6NLF2	546 aa	Predicted RBP	3.89	□□□□□ -1.79
PPP4R1-209	ENST00000578329	TMEM229A	B2RXF0	380 aa		3.89	□□□□□ -1.79
PPP4R1-209	ENST00000578329	FTCDNL1	E5RQL4	147 aa		3.89	□□□□□ -1.79
PPP4R1-209	ENST00000578329	ABCD4	O14678	606 aa		3.89	□□□□□ -1.79
PPP4R1-209	ENST00000578329	CLOCK	O15516	846 aa		3.89	□□□□□ -1.79
PPP4R1-209	ENST00000578329	CD5L	O43866	347 aa		3.89	□□□□□ -1.79
PPP4R1-209	ENST00000578329	TPST2	O60704	377 aa		3.89	□□□□□ -1.79
PPP4R1-209	ENST00000578329	SNN	O75324	88 aa	Predicted RBP	3.89	□□□□□ -1.79
PPP4R1-209	ENST00000578329	CRCP	O75575	148 aa		3.89	□□□□□ -1.79
PPP4R1-209	ENST00000578329	RAD51D	O75771	328 aa		3.89	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms