RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 CLDN20P56880 219 aa14.34□□□□□ -0.11
VAPA-204ENST00000577901 SKP2Q13309 424 aa14.34□□□□□ -0.11
VAPA-204ENST00000577901 QPRTQ15274 297 aa14.34□□□□□ -0.11
VAPA-204ENST00000577901 RGNQ15493 299 aa14.34□□□□□ -0.11
VAPA-204ENST00000577901 ACKR1Q16570 336 aa14.34□□□□□ -0.11
VAPA-204ENST00000577901 PDSS1Q5T2R2 415 aa14.34□□□□□ -0.11
VAPA-204ENST00000577901 VWA1Q6PCB0 445 aa14.34□□□□□ -0.11
VAPA-204ENST00000577901 PRSS57Q6UWY2 283 aa14.34□□□□□ -0.11
VAPA-204ENST00000577901 CMIPQ8IY22 773 aa14.34□□□□□ -0.11
VAPA-204ENST00000577901 PEX5LQ8IYB4 626 aa14.34□□□□□ -0.11
VAPA-204ENST00000577901 LILRA2Q8N149 483 aa14.34□□□□□ -0.11
VAPA-204ENST00000577901 FBXO27Q8NI29 283 aa14.34□□□□□ -0.11
VAPA-204ENST00000577901 POC1BQ8TC44 478 aa14.34□□□□□ -0.11
VAPA-204ENST00000577901 SLC38A5Q8WUX1 472 aa14.34□□□□□ -0.11
VAPA-204ENST00000577901 TMEM234Q8WY98 164 aa14.34□□□□□ -0.11
VAPA-204ENST00000577901 PIK3IP1Q96FE7 263 aa14.34□□□□□ -0.11
VAPA-204ENST00000577901 MRGPRX4Q96LA9 322 aa14.34□□□□□ -0.11
VAPA-204ENST00000577901 Q96MF0 132 aa14.34□□□□□ -0.11
VAPA-204ENST00000577901 MED18Q9BUE0 208 aa14.34□□□□□ -0.11
VAPA-204ENST00000577901 PINK1Q9BXM7 581 aa14.34□□□□□ -0.11
VAPA-204ENST00000577901 QRSL1Q9H0R6 528 aaKnown RBP14.34□□□□□ -0.11
VAPA-204ENST00000577901 UBTD1Q9HAC8 227 aa14.34□□□□□ -0.11
VAPA-204ENST00000577901 CACYBPQ9HB71 228 aaKnown RBP14.34□□□□□ -0.11
VAPA-204ENST00000577901 SLAMF8Q9P0V8 285 aa14.34□□□□□ -0.11
VAPA-204ENST00000577901 CORO2BQ9UQ03 480 aa14.34□□□□□ -0.11
VAPA-204ENST00000577901 PCNX3Q9H6A9 2034 aa14.34□□□□□ -0.11
VAPA-204ENST00000577901 MED12Q93074 2177 aa14.33□□□□□ -0.11
VAPA-204ENST00000577901 A0A0G2JPF8 293 aa14.33□□□□□ -0.12
VAPA-204ENST00000577901 EVPLLA8MZ36 301 aa14.33□□□□□ -0.12
VAPA-204ENST00000577901 HNRNPCL2B2RXH8 293 aa14.33□□□□□ -0.12
VAPA-204ENST00000577901 HNRNPCL3B7ZW38 293 aa14.33□□□□□ -0.12
VAPA-204ENST00000577901 H0YC42 278 aa14.33□□□□□ -0.12
VAPA-204ENST00000577901 EIF1AYO14602 144 aaKnown RBP14.33□□□□□ -0.12
VAPA-204ENST00000577901 HNRNPCL1O60812 293 aaKnown RBP14.33□□□□□ -0.12
VAPA-204ENST00000577901 BCHEP06276 602 aa14.33□□□□□ -0.12
VAPA-204ENST00000577901 HNRNPCL4P0DMR1 293 aa14.33□□□□□ -0.12
VAPA-204ENST00000577901 PRKCAP17252 672 aa14.33□□□□□ -0.12
VAPA-204ENST00000577901 HOXB9P17482 250 aaPredicted RBP14.33□□□□□ -0.12
VAPA-204ENST00000577901 FPR1P21462 350 aa14.33□□□□□ -0.12
VAPA-204ENST00000577901 CRYGSP22914 178 aa14.33□□□□□ -0.12
VAPA-204ENST00000577901 ELK4P28324 431 aa14.33□□□□□ -0.12
VAPA-204ENST00000577901 EIF1AXP47813 144 aaKnown RBP14.33□□□□□ -0.12
VAPA-204ENST00000577901 SLC6A8P48029 635 aa14.33□□□□□ -0.12
VAPA-204ENST00000577901 TPD52P55327 224 aaPredicted RBP14.33□□□□□ -0.12
VAPA-204ENST00000577901 SF3A3Q12874 501 aaKnown RBP eCLIP14.33□□□□□ -0.122e-20■■■■□ 20.6
VAPA-204ENST00000577901 FOXF1Q12946 379 aa14.33□□□□□ -0.12
VAPA-204ENST00000577901 ZNF474Q6S9Z5 364 aaPredicted RBP14.33□□□□□ -0.12
VAPA-204ENST00000577901 ESPNLQ6ZVH7 1005 aa14.33□□□□□ -0.12
VAPA-204ENST00000577901 BTLAQ7Z6A9 289 aa14.33□□□□□ -0.12
VAPA-204ENST00000577901 YTHDF3Q7Z739 585 aaKnown RBP14.33□□□□□ -0.12
VAPA-204ENST00000577901 HMGN2P46Q86SG4 172 aa14.33□□□□□ -0.12
VAPA-204ENST00000577901 GGNQ86UU5 652 aa14.33□□□□□ -0.12
VAPA-204ENST00000577901 PRIMA1Q86XR5 153 aa14.33□□□□□ -0.12
VAPA-204ENST00000577901 METTL25Q8N6Q8 603 aa14.33□□□□□ -0.12
VAPA-204ENST00000577901 WDR60Q8WVS4 1066 aa14.33□□□□□ -0.12
VAPA-204ENST00000577901 CCL19Q99731 98 aa14.33□□□□□ -0.12
VAPA-204ENST00000577901 NPAS1Q99742 590 aa14.33□□□□□ -0.12
VAPA-204ENST00000577901 KLHDC3Q9BQ90 382 aa14.33□□□□□ -0.12
VAPA-204ENST00000577901 OPN3Q9H1Y3 402 aaPredicted RBP14.33□□□□□ -0.12
VAPA-204ENST00000577901 EXOSC3Q9NQT5 275 aaKnown RBP14.33□□□□□ -0.12
VAPA-204ENST00000577901 SLC25A37Q9NYZ2 338 aa14.33□□□□□ -0.12
VAPA-204ENST00000577901 VAPAQ9P0L0 249 aa14.33□□□□□ -0.12
VAPA-204ENST00000577901 KLHL14Q9P2G3 628 aa14.33□□□□□ -0.12
VAPA-204ENST00000577901 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.33□□□□□ -0.12
VAPA-204ENST00000577901 ZNF232Q9UNY5 417 aa14.33□□□□□ -0.12
VAPA-204ENST00000577901 ZNF175Q9Y473 711 aa14.33□□□□□ -0.12
VAPA-204ENST00000577901 GMEB1Q9Y692 573 aa14.33□□□□□ -0.12
VAPA-204ENST00000577901 C5orf58C9J3I9 102 aa14.32□□□□□ -0.12
VAPA-204ENST00000577901 SMAD7O15105 426 aaKnown RBP14.32□□□□□ -0.12
VAPA-204ENST00000577901 DNAJA2O60884 412 aa14.32□□□□□ -0.12
VAPA-204ENST00000577901 BMP2P12643 396 aa14.32□□□□□ -0.12
VAPA-204ENST00000577901 UGT2B10P36537 528 aa14.32□□□□□ -0.12
VAPA-204ENST00000577901 KIR2DL2P43627 348 aaPredicted RBP14.32□□□□□ -0.12
VAPA-204ENST00000577901 TOMM34Q15785 309 aaPredicted RBP14.32□□□□□ -0.12
VAPA-204ENST00000577901 ZSWIM7Q19AV6 140 aa14.32□□□□□ -0.12
VAPA-204ENST00000577901 SLC25A53Q5H9E4 307 aa14.32□□□□□ -0.12
VAPA-204ENST00000577901 CGB2Q6NT52 195 aa14.32□□□□□ -0.12
VAPA-204ENST00000577901 FAM71CQ8NEG0 241 aa14.32□□□□□ -0.12
VAPA-204ENST00000577901 OR52P1PQ8NH57 321 aa14.32□□□□□ -0.12
VAPA-204ENST00000577901 ZNF563Q8TA94 476 aa14.32□□□□□ -0.12
VAPA-204ENST00000577901 ST8SIA1Q92185 356 aa14.32□□□□□ -0.12
VAPA-204ENST00000577901 PERPQ96FX8 193 aa14.32□□□□□ -0.12
VAPA-204ENST00000577901 TMEM19Q96HH6 336 aa14.32□□□□□ -0.12
VAPA-204ENST00000577901 SLC39A3Q9BRY0 314 aa14.32□□□□□ -0.12
VAPA-204ENST00000577901 BDH2Q9BUT1 245 aa14.32□□□□□ -0.12
VAPA-204ENST00000577901 PRRG4Q9BZD6 226 aa14.32□□□□□ -0.12
VAPA-204ENST00000577901 TMEM185BQ9H7F4 350 aa14.32□□□□□ -0.12
VAPA-204ENST00000577901 A4GALTQ9NPC4 353 aa14.32□□□□□ -0.12
VAPA-204ENST00000577901 TIGARQ9NQ88 270 aa14.32□□□□□ -0.12
VAPA-204ENST00000577901 SERINC1Q9NRX5 453 aa14.32□□□□□ -0.12
VAPA-204ENST00000577901 ELOVL5Q9NYP7 299 aa14.32□□□□□ -0.12
VAPA-204ENST00000577901 CLDN24A6NM45 220 aa14.31□□□□□ -0.12
VAPA-204ENST00000577901 ADAMDEC1O15204 470 aa14.31□□□□□ -0.12
VAPA-204ENST00000577901 SYNGR4O95473 234 aa14.31□□□□□ -0.12
VAPA-204ENST00000577901 OPN1LWP04000 364 aa14.31□□□□□ -0.12
VAPA-204ENST00000577901 FCGR2AP12318 317 aa14.31□□□□□ -0.12
VAPA-204ENST00000577901 NID1P14543 1247 aa14.31□□□□□ -0.12
VAPA-204ENST00000577901 POU2F1P14859 743 aa14.31□□□□□ -0.12
VAPA-204ENST00000577901 UQCRBP14927 111 aa14.31□□□□□ -0.12
VAPA-204ENST00000577901 RPS4Y1P22090 263 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms