RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 MYBPHQ13203 477 aa21.04■□□□□ 0.96
SNF8-217ENST00000576353 NFYCQ13952 458 aa21.04■□□□□ 0.96
SNF8-217ENST00000576353 RNF220Q5VTB9 566 aa21.04■□□□□ 0.96
SNF8-217ENST00000576353 ZNF836Q6ZNA1 936 aa21.04■□□□□ 0.96
SNF8-217ENST00000576353 BTLAQ7Z6A9 289 aa21.04■□□□□ 0.96
SNF8-217ENST00000576353 RETREG3Q86VR2 466 aa21.04■□□□□ 0.96
SNF8-217ENST00000576353 ZNF317Q96PQ6 595 aaPredicted RBP21.04■□□□□ 0.96
SNF8-217ENST00000576353 CGREF1Q99674 301 aa21.04■□□□□ 0.96
SNF8-217ENST00000576353 ZNF559Q9BR84 538 aa21.04■□□□□ 0.96
SNF8-217ENST00000576353 SPATA9Q9BWV2 254 aa21.04■□□□□ 0.96
SNF8-217ENST00000576353 TMEM38AQ9H6F2 299 aa21.04■□□□□ 0.96
SNF8-217ENST00000576353 RLIMQ9NVW2 624 aa21.04■□□□□ 0.96
SNF8-217ENST00000576353 EMC9Q9Y3B6 208 aa21.04■□□□□ 0.96
SNF8-217ENST00000576353 CACNA1DQ01668 2161 aa21.03■□□□□ 0.96
SNF8-217ENST00000576353 ADAM11O75078 769 aa21.03■□□□□ 0.96
SNF8-217ENST00000576353 ARAFP10398 606 aa21.03■□□□□ 0.96
SNF8-217ENST00000576353 ETS2P15036 469 aa21.03■□□□□ 0.96
SNF8-217ENST00000576353 CTBP2P56545 445 aa21.03■□□□□ 0.96
SNF8-217ENST00000576353 RAC3P60763 192 aa21.03■□□□□ 0.96
SNF8-217ENST00000576353 CDK6Q00534 326 aa21.03■□□□□ 0.96
SNF8-217ENST00000576353 TLE4Q04727 773 aa21.03■□□□□ 0.96
SNF8-217ENST00000576353 EPS8Q12929 822 aa21.03■□□□□ 0.96
SNF8-217ENST00000576353 GUSBP1Q15486 140 aa21.03■□□□□ 0.96
SNF8-217ENST00000576353 ZNF239Q16600 458 aaKnown RBP21.03■□□□□ 0.96
SNF8-217ENST00000576353 ZNF311Q5JNZ3 666 aa21.03■□□□□ 0.96
SNF8-217ENST00000576353 REEP3Q6NUK4 255 aa21.03■□□□□ 0.96
SNF8-217ENST00000576353 VWA1Q6PCB0 445 aa21.03■□□□□ 0.96
SNF8-217ENST00000576353 ZNF550Q7Z398 422 aa21.03■□□□□ 0.96
SNF8-217ENST00000576353 KRT73Q86Y46 540 aa21.03■□□□□ 0.96
SNF8-217ENST00000576353 ANKRD27Q96NW4 1050 aa21.03■□□□□ 0.96
SNF8-217ENST00000576353 OR5B2Q96R09 309 aa21.03■□□□□ 0.96
SNF8-217ENST00000576353 CPPED1Q9BRF8 314 aaPredicted RBP21.03■□□□□ 0.96
SNF8-217ENST00000576353 IKZF5Q9H5V7 419 aa21.03■□□□□ 0.96
SNF8-217ENST00000576353 COQ10BQ9H8M1 238 aa21.03■□□□□ 0.96
SNF8-217ENST00000576353 SAR1AQ9NR31 198 aa21.03■□□□□ 0.96
SNF8-217ENST00000576353 CTPS2Q9NRF8 586 aa21.03■□□□□ 0.96
SNF8-217ENST00000576353 CHRNA9Q9UGM1 479 aa21.03■□□□□ 0.96
SNF8-217ENST00000576353 AP3D1O14617 1153 aa21.02■□□□□ 0.96
SNF8-217ENST00000576353 SS18L1O75177 396 aaPredicted RBP21.02■□□□□ 0.96
SNF8-217ENST00000576353 CD8BP10966 210 aa21.02■□□□□ 0.96
SNF8-217ENST00000576353 SLC6A2P23975 617 aa21.02■□□□□ 0.96
SNF8-217ENST00000576353 ADSLP30566 484 aaPredicted RBP21.02■□□□□ 0.96
SNF8-217ENST00000576353 SLC1A3P43003 542 aa21.02■□□□□ 0.96
SNF8-217ENST00000576353 CLK1P49759 484 aaKnown RBP21.02■□□□□ 0.96
SNF8-217ENST00000576353 RNPS1Q15287 305 aaKnown RBP21.02■□□□□ 0.96
SNF8-217ENST00000576353 MAPRE2Q15555 327 aa21.02■□□□□ 0.96
SNF8-217ENST00000576353 SYT14P1Q58G82 188 aa21.02■□□□□ 0.96
SNF8-217ENST00000576353 C10orf111Q8N326 155 aa21.02■□□□□ 0.96
SNF8-217ENST00000576353 NFKBIDQ8NI38 313 aa21.02■□□□□ 0.96
SNF8-217ENST00000576353 ROBO4Q8WZ75 1007 aa21.02■□□□□ 0.96
SNF8-217ENST00000576353 SPATA5L1Q9BVQ7 753 aa21.02■□□□□ 0.96
SNF8-217ENST00000576353 SRXN1Q9BYN0 137 aa21.02■□□□□ 0.96
SNF8-217ENST00000576353 MCCC2Q9HCC0 563 aa21.02■□□□□ 0.96
SNF8-217ENST00000576353 GALNT8Q9NY28 637 aa21.02■□□□□ 0.96
SNF8-217ENST00000576353 PROCRQ9UNN8 238 aa21.02■□□□□ 0.96
SNF8-217ENST00000576353 ITPR2Q14571 2701 aa21.02■□□□□ 0.96
SNF8-217ENST00000576353 A0A1W2PNR3 127 aa21.01■□□□□ 0.95
SNF8-217ENST00000576353 TUBAL3A6NHL2 446 aa21.01■□□□□ 0.95
SNF8-217ENST00000576353 CGAP01215 116 aa21.01■□□□□ 0.95
SNF8-217ENST00000576353 TFPIP10646 304 aa21.01■□□□□ 0.95
SNF8-217ENST00000576353 POLR2HP52434 150 aaKnown RBP21.01■□□□□ 0.95
SNF8-217ENST00000576353 MAP2K6P52564 334 aa21.01■□□□□ 0.95
SNF8-217ENST00000576353 COPZ1P61923 177 aa21.01■□□□□ 0.95
SNF8-217ENST00000576353 KLF10Q13118 480 aa21.01■□□□□ 0.95
SNF8-217ENST00000576353 SNTB1Q13884 538 aaKnown RBP21.01■□□□□ 0.95
SNF8-217ENST00000576353 SCARB2Q14108 478 aa21.01■□□□□ 0.95
SNF8-217ENST00000576353 TMPPEQ6ZT21 453 aa21.01■□□□□ 0.95
SNF8-217ENST00000576353 ADGRG3Q86Y34 549 aa21.01■□□□□ 0.95
SNF8-217ENST00000576353 SLC43A2Q8N370 569 aa21.01■□□□□ 0.95
SNF8-217ENST00000576353 CLIP4Q8N3C7 705 aa21.01■□□□□ 0.95
SNF8-217ENST00000576353 OR6K3Q8NGY3 331 aa21.01■□□□□ 0.95
SNF8-217ENST00000576353 RNF128Q8TEB7 428 aa21.01■□□□□ 0.95
SNF8-217ENST00000576353 FAM222BQ8WU58 562 aa21.01■□□□□ 0.95
SNF8-217ENST00000576353 SLC39A3Q9BRY0 314 aa21.01■□□□□ 0.95
SNF8-217ENST00000576353 PRKD3O94806 890 aa21■□□□□ 0.95
SNF8-217ENST00000576353 GKN3PP0CG01 181 aa21■□□□□ 0.95
SNF8-217ENST00000576353 PCYT1AP49585 367 aa21■□□□□ 0.95
SNF8-217ENST00000576353 CSNK2A1P68400 391 aaPredicted RBP21■□□□□ 0.95
SNF8-217ENST00000576353 CYLC2Q14093 348 aaPredicted RBP21■□□□□ 0.95
SNF8-217ENST00000576353 COQ5Q5HYK3 327 aa21■□□□□ 0.95
SNF8-217ENST00000576353 FCRLAQ7L513 359 aa21■□□□□ 0.95
SNF8-217ENST00000576353 MED12LQ86YW9 2145 aa21■□□□□ 0.95
SNF8-217ENST00000576353 SLC35B4Q969S0 331 aa21■□□□□ 0.95
SNF8-217ENST00000576353 ZNF607Q96SK3 696 aa21■□□□□ 0.95
SNF8-217ENST00000576353 OPN3Q9H1Y3 402 aaPredicted RBP21■□□□□ 0.95
SNF8-217ENST00000576353 GP6Q9HCN6 339 aa21■□□□□ 0.95
SNF8-217ENST00000576353 PLSCR4Q9NRQ2 329 aa21■□□□□ 0.95
SNF8-217ENST00000576353 ELOVL5Q9NYP7 299 aa21■□□□□ 0.95
SNF8-217ENST00000576353 CRIM1Q9NZV1 1036 aa21■□□□□ 0.95
SNF8-217ENST00000576353 CLEC4AQ9UMR7 237 aa21■□□□□ 0.95
SNF8-217ENST00000576353 HEATR5AQ86XA9 2040 aa20.99■□□□□ 0.95
SNF8-217ENST00000576353 TMED7-TICAM2A0A0A6YYA0 188 aa20.99■□□□□ 0.95
SNF8-217ENST00000576353 BBIP1A8MTZ0 92 aa20.99■□□□□ 0.95
SNF8-217ENST00000576353 SULT2B1O00204 365 aa20.99■□□□□ 0.95
SNF8-217ENST00000576353 FBP2O00757 339 aa20.99■□□□□ 0.95
SNF8-217ENST00000576353 SLC22A2O15244 555 aa20.99■□□□□ 0.95
SNF8-217ENST00000576353 TACR3P29371 465 aa20.99■□□□□ 0.95
SNF8-217ENST00000576353 PRKAR1BP31321 381 aa20.99■□□□□ 0.95
SNF8-217ENST00000576353 CPOXP36551 454 aa20.99■□□□□ 0.95
SNF8-217ENST00000576353 ACAA2P42765 397 aaKnown RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms