RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 PRR14Q9BWN1 585 aa13.11□□□□□ -0.31
NPLOC4-218ENST00000574964 TRIM15Q9C019 465 aa13.11□□□□□ -0.31
NPLOC4-218ENST00000574964 LRMDAQ9H2I8 198 aa13.11□□□□□ -0.31
NPLOC4-218ENST00000574964 TMEM185BQ9H7F4 350 aa13.11□□□□□ -0.31
NPLOC4-218ENST00000574964 CTPS2Q9NRF8 586 aa13.11□□□□□ -0.31
NPLOC4-218ENST00000574964 DCAF13Q9NV06 445 aaKnown RBP13.11□□□□□ -0.31
NPLOC4-218ENST00000574964 SH3BGRL2Q9UJC5 107 aa13.11□□□□□ -0.31
NPLOC4-218ENST00000574964 MED12LQ86YW9 2145 aa13.1□□□□□ -0.31
NPLOC4-218ENST00000574964 TMED7-TICAM2A0A0A6YYA0 188 aa13.1□□□□□ -0.31
NPLOC4-218ENST00000574964 CPSF4LA6NMK7 179 aaKnown RBP13.1□□□□□ -0.31
NPLOC4-218ENST00000574964 H0Y3Z8 333 aa13.1□□□□□ -0.31
NPLOC4-218ENST00000574964 OPN1LWP04000 364 aa13.1□□□□□ -0.31
NPLOC4-218ENST00000574964 IFNW1P05000 195 aa13.1□□□□□ -0.31
NPLOC4-218ENST00000574964 TFPIP10646 304 aa13.1□□□□□ -0.31
NPLOC4-218ENST00000574964 SFTPDP35247 375 aa13.1□□□□□ -0.31
NPLOC4-218ENST00000574964 ZNF136P52737 540 aa13.1□□□□□ -0.31
NPLOC4-218ENST00000574964 RPS3AP61247 264 aaKnown RBP13.1□□□□□ -0.31
NPLOC4-218ENST00000574964 KCNC4Q03721 635 aa13.1□□□□□ -0.31
NPLOC4-218ENST00000574964 TRAP1Q12931 704 aaKnown RBP13.1□□□□□ -0.31
NPLOC4-218ENST00000574964 SF3B4Q15427 424 aaKnown RBP eCLIP13.1□□□□□ -0.311e-12■■■■■ 63.9
NPLOC4-218ENST00000574964 OR1Q1Q15612 314 aa13.1□□□□□ -0.31
NPLOC4-218ENST00000574964 BCL2A1Q16548 175 aa13.1□□□□□ -0.31
NPLOC4-218ENST00000574964 C3AR1Q16581 482 aa13.1□□□□□ -0.31
NPLOC4-218ENST00000574964 GXYLT1Q4G148 440 aa13.1□□□□□ -0.31
NPLOC4-218ENST00000574964 MTX3Q5HYI7 312 aa13.1□□□□□ -0.31
NPLOC4-218ENST00000574964 DCST1Q5T197 706 aa13.1□□□□□ -0.31
NPLOC4-218ENST00000574964 PDSS1Q5T2R2 415 aa13.1□□□□□ -0.31
NPLOC4-218ENST00000574964 FGD2Q7Z6J4 655 aa13.1□□□□□ -0.31
NPLOC4-218ENST00000574964 RBM45Q8IUH3 476 aaKnown RBP13.1□□□□□ -0.31
NPLOC4-218ENST00000574964 LACC1Q8IV20 430 aa13.1□□□□□ -0.31
NPLOC4-218ENST00000574964 ULK2Q8IYT8 1036 aa13.1□□□□□ -0.31
NPLOC4-218ENST00000574964 LILRA2Q8N149 483 aa13.1□□□□□ -0.31
NPLOC4-218ENST00000574964 PRR7Q8TB68 274 aa13.1□□□□□ -0.31
NPLOC4-218ENST00000574964 DNAJA4Q8WW22 397 aaPredicted RBP13.1□□□□□ -0.31
NPLOC4-218ENST00000574964 RELTQ969Z4 430 aa13.1□□□□□ -0.31
NPLOC4-218ENST00000574964 ZNF524Q96C55 264 aa13.1□□□□□ -0.31
NPLOC4-218ENST00000574964 ASB9Q96DX5 294 aa13.1□□□□□ -0.31
NPLOC4-218ENST00000574964 WFDC6Q9BQY6 131 aa13.1□□□□□ -0.31
NPLOC4-218ENST00000574964 MMADHCQ9H3L0 296 aaPredicted RBP13.1□□□□□ -0.31
NPLOC4-218ENST00000574964 PNPLA3Q9NST1 481 aa13.1□□□□□ -0.31
NPLOC4-218ENST00000574964 OSGIN1Q9UJX0 560 aa13.1□□□□□ -0.31
NPLOC4-218ENST00000574964 TMED7Q9Y3B3 224 aa13.1□□□□□ -0.31
NPLOC4-218ENST00000574964 DOCK7Q96N67 2140 aa13.1□□□□□ -0.31
NPLOC4-218ENST00000574964 A0A1B0GWA3 101 aa13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 ELOA3DA6NLF2 546 aaPredicted RBP13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 FIGNL2A6NMB9 653 aa13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 ETV2O00321 342 aaPredicted RBP13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 EIF1AYO14602 144 aaKnown RBP13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 FMO6PO60774 539 aa13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 PRKD3O94806 890 aa13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 IL11P20809 199 aa13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 ATP6V1B2P21281 511 aa13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 PSMA4P25789 261 aaKnown RBP13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 HTR2AP28223 471 aa13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 SLC7A1P30825 629 aa13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 LHX2P50458 406 aa13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 TAS2R41P59536 307 aa13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 MS4A2Q01362 244 aa13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 SGCBQ16585 318 aa13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 EIF2S3LQ2VIR3 472 aaKnown RBP13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 ELOA3BQ3SY89 546 aa13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 TMEM176BQ3YBM2 270 aaPredicted RBP13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 ALG10BQ5I7T1 473 aa13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 ENTPD8Q5MY95 495 aa13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 LCN8Q6JVE9 175 aa13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 C3orf33Q6P1S2 294 aa13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 PGM2L1Q6PCE3 622 aa13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 ULK3Q6PHR2 472 aa13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 CHERPQ8IWX8 916 aaKnown RBP13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 LSMEM1Q8N8F7 131 aa13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 ELOA3Q8NG57 546 aa13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 OR4D11Q8NGI4 311 aa13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 SLC25A43Q8WUT9 341 aaPredicted RBP13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 C3orf49Q96BT1 292 aa13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 SLC47A1Q96FL8 570 aa13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 WDYHV1Q96HA8 205 aa13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 PYURFQ96I23 114 aa13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 ADAM19Q9H013 955 aa13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 TP63Q9H3D4 680 aaPredicted RBP13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 CHRNA9Q9UGM1 479 aa13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 ZNF835Q9Y2P0 537 aa13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 ZNF462Q96JM2 2506 aa13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 HIVEP3Q5T1R4 2406 aa13.09□□□□□ -0.31
NPLOC4-218ENST00000574964 AHRRA9YTQ3 701 aa13.08□□□□□ -0.32
NPLOC4-218ENST00000574964 TMEM229AB2RXF0 380 aa13.08□□□□□ -0.32
NPLOC4-218ENST00000574964 TPST2O60704 377 aa13.08□□□□□ -0.32
NPLOC4-218ENST00000574964 WDR1O75083 606 aa13.08□□□□□ -0.32
NPLOC4-218ENST00000574964 CIB2O75838 187 aa13.08□□□□□ -0.32
NPLOC4-218ENST00000574964 NTN1O95631 604 aa13.08□□□□□ -0.32
NPLOC4-218ENST00000574964 GABRA1P14867 456 aa13.08□□□□□ -0.32
NPLOC4-218ENST00000574964 CPN1P15169 458 aa13.08□□□□□ -0.32
NPLOC4-218ENST00000574964 ZNF708P17019 499 aa13.08□□□□□ -0.32
NPLOC4-218ENST00000574964 FKBP2P26885 142 aaKnown RBP13.08□□□□□ -0.32
NPLOC4-218ENST00000574964 UQCRFS1P47985 274 aa13.08□□□□□ -0.32
NPLOC4-218ENST00000574964 DLX5P56178 289 aa13.08□□□□□ -0.32
NPLOC4-218ENST00000574964 CLDN18P56856 261 aa13.08□□□□□ -0.32
NPLOC4-218ENST00000574964 FLOT2Q14254 428 aa13.08□□□□□ -0.32
NPLOC4-218ENST00000574964 NPTX1Q15818 432 aa13.08□□□□□ -0.32
NPLOC4-218ENST00000574964 PPP4R4Q6NUP7 873 aa13.08□□□□□ -0.32
NPLOC4-218ENST00000574964 ZNF613Q6PF04 617 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms