RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 BAIAP2Q9UQB8 552 aa12.9□□□□□ -0.34
VPS33B-208ENST00000574755 SF3B6Q9Y3B4 125 aaKnown RBP12.9□□□□□ -0.34
VPS33B-208ENST00000574755 CACNA1EQ15878 2313 aa12.9□□□□□ -0.34
VPS33B-208ENST00000574755 A0A087WUJ7 227 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 A0A1B0GX78 115 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 SLC22A31A6NKX4 558 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 C12orf71A8MTZ7 269 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 SCDO00767 359 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 CTDSP2O14595 271 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 RGS5O15539 181 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 UPK1BO75841 260 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 CDRT1O95170 752 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 IL33O95760 270 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 PEPDP12955 493 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 CCR4P51679 360 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 RUNX1T1Q06455 604 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 LYSMD4Q5XG99 296 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 KMT5CQ86Y97 462 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 ZNF440Q8IYI8 595 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 UBALD2Q8IYN6 164 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 ACBD7Q8N6N7 88 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 OR52N1Q8NH53 320 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 ZNF721Q8TF20 911 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 SNRNP27Q8WVK2 155 aaKnown RBP12.89□□□□□ -0.35
VPS33B-208ENST00000574755 RNF31Q96EP0 1072 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 LCORQ96JN0 433 aaPredicted RBP12.89□□□□□ -0.35
VPS33B-208ENST00000574755 TBX5Q99593 518 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 ADAMTS20P59510 1910 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 A0A075B6Q4 140 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 TCRBV16S1A1N1A0A5B0 115 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 ANKRD33BA6NCL7 494 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 SAGE2PA6NJ88 616 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 J3QRE1 110 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 TBX1O43435 398 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 IGKV3-11P04433 115 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 UBL4AP11441 157 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 HK1P19367 917 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 CELP19835 753 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 EFNA3P52797 238 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 FHL1Q13642 323 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 CRMP1Q14194 572 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 CD226Q15762 336 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 SLITRK4Q8IW52 837 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 CYB561A3Q8NBI2 242 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 ZNF501Q96CX3 271 aaPredicted RBP12.89□□□□□ -0.35
VPS33B-208ENST00000574755 SGTBQ96EQ0 304 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 KCTD7Q96MP8 289 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 TEAD3Q99594 435 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 JAM3Q9BX67 310 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 SIAEQ9HAT2 523 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 SMURF1Q9HCE7 757 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 PRDM6Q9NQX0 595 aa12.89□□□□□ -0.35
VPS33B-208ENST00000574755 MRTO4Q9UKD2 239 aaKnown RBP12.89□□□□□ -0.35
VPS33B-208ENST00000574755 FER1L5A0AVI2 2057 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 C2orf92A0A1B0GVN3 265 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 FRG2CA6NGY1 282 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 LRRN3E7EW58 273 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 DDAH2O95865 285 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 IL1AP01583 271 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 MSL3P1P0C860 447 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 CLUP10909 449 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 FABP5Q01469 135 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 CSTF1Q05048 431 aaKnown RBP12.88□□□□□ -0.35
VPS33B-208ENST00000574755 DNASE1L3Q13609 305 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 ZNF362Q5T0B9 420 aaPredicted RBP12.88□□□□□ -0.35
VPS33B-208ENST00000574755 ARMC4Q5T2S8 1044 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 ARHGAP11AQ6P4F7 1023 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 ZNF322Q6U7Q0 402 aaPredicted RBP12.88□□□□□ -0.35
VPS33B-208ENST00000574755 TMPRSS11AQ6ZMR5 421 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 PRR22Q8IZ63 422 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 LRRC17Q8N6Y2 441 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 KISS1RQ969F8 398 aaPredicted RBP12.88□□□□□ -0.35
VPS33B-208ENST00000574755 C3orf49Q96BT1 292 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 ERMAPQ96PL5 475 aaPredicted RBP12.88□□□□□ -0.35
VPS33B-208ENST00000574755 ADOQ96SZ5 270 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 LRRN3Q9H3W5 708 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 ZNF768Q9H5H4 540 aaKnown RBP12.88□□□□□ -0.35
VPS33B-208ENST00000574755 MKL2Q9ULH7 1088 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 GSTK1Q9Y2Q3 226 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 COL5A1P20908 1838 aaPredicted RBP12.88□□□□□ -0.35
VPS33B-208ENST00000574755 GTPBP1O00178 669 aaKnown RBP12.88□□□□□ -0.35
VPS33B-208ENST00000574755 REM1O75628 298 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 NDUFB2O95178 105 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 UTS2O95399 124 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 IFNGP01579 166 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 ACSM1Q08AH1 577 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 CBLN3Q6UW01 205 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 PLEKHG7Q6ZR37 379 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 KLBQ86Z14 1044 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 SLC43A2Q8N370 569 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 FAM71CQ8NEG0 241 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 DAZLQ92904 295 aaKnown RBP12.88□□□□□ -0.35
VPS33B-208ENST00000574755 ADIPOR1Q96A54 375 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 SLC25A46Q96AG3 418 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 GUCD1Q96NT3 240 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 ALG8Q9BVK2 526 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 TMED9Q9BVK6 235 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 SLC7A5P2Q9GIP4 190 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 NRSN2Q9GZP1 204 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 POLE4Q9NR33 117 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms