RNA–Protein interactions for RNA: ENST00000574205.5

CTDNEP1-209, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 1,506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-209ENST00000574205 POMZP3Q6PJE2 187 aa29.81■■■□□ 2.36
CTDNEP1-209ENST00000574205 ESPNLQ6ZVH7 1005 aa29.81■■■□□ 2.36
CTDNEP1-209ENST00000574205 ARHGAP24Q8N264 748 aa29.81■■■□□ 2.36
CTDNEP1-209ENST00000574205 CADM2Q8N3J6 435 aa29.81■■■□□ 2.36
CTDNEP1-209ENST00000574205 RPRMLQ8N4K4 120 aa29.81■■■□□ 2.36
CTDNEP1-209ENST00000574205 ADAM19Q9H013 955 aa29.81■■■□□ 2.36
CTDNEP1-209ENST00000574205 EGFL7Q9UHF1 273 aa29.81■■■□□ 2.36
CTDNEP1-209ENST00000574205 TCN1P20061 433 aaPredicted RBP29.81■■■□□ 2.36
CTDNEP1-209ENST00000574205 POLR2HP52434 150 aaKnown RBP29.81■■■□□ 2.36
CTDNEP1-209ENST00000574205 PER3P56645 1201 aa29.81■■■□□ 2.36
CTDNEP1-209ENST00000574205 CYBRD1Q53TN4 286 aa29.81■■■□□ 2.36
CTDNEP1-209ENST00000574205 TMEM211Q6ICI0 200 aa29.81■■■□□ 2.36
CTDNEP1-209ENST00000574205 CHMP1BQ7LBR1 199 aa29.81■■■□□ 2.36
CTDNEP1-209ENST00000574205 ADGRE4PQ86SQ3 457 aa29.81■■■□□ 2.36
CTDNEP1-209ENST00000574205 RANBP3LQ86VV4 465 aaPredicted RBP29.81■■■□□ 2.36
CTDNEP1-209ENST00000574205 FAM26EQ8N5C1 309 aa29.81■■■□□ 2.36
CTDNEP1-209ENST00000574205 LSMEM1Q8N8F7 131 aa29.81■■■□□ 2.36
CTDNEP1-209ENST00000574205 FAM156AQ8NDB6 213 aa29.81■■■□□ 2.36
CTDNEP1-209ENST00000574205 SLC25A43Q8WUT9 341 aaPredicted RBP29.81■■■□□ 2.36
CTDNEP1-209ENST00000574205 PROX1Q92786 737 aa29.81■■■□□ 2.36
CTDNEP1-209ENST00000574205 KLHL15Q96M94 604 aa29.81■■■□□ 2.36
CTDNEP1-209ENST00000574205 CHRNA9Q9UGM1 479 aa29.81■■■□□ 2.36
CTDNEP1-209ENST00000574205 OSGIN1Q9UJX0 560 aa29.81■■■□□ 2.36
CTDNEP1-209ENST00000574205 SPIN1Q9Y657 262 aaPredicted RBP29.81■■■□□ 2.36
CTDNEP1-209ENST00000574205 USP9XQ93008 2570 aaPredicted RBP29.8■■■□□ 2.36
CTDNEP1-209ENST00000574205 EIF1AYO14602 144 aaKnown RBP29.8■■■□□ 2.36
CTDNEP1-209ENST00000574205 TACR3P29371 465 aa29.8■■■□□ 2.36
CTDNEP1-209ENST00000574205 SFTPDP35247 375 aa29.8■■■□□ 2.36
CTDNEP1-209ENST00000574205 RPS3AP61247 264 aaKnown RBP29.8■■■□□ 2.36
CTDNEP1-209ENST00000574205 SRSF1Q07955 248 aaKnown RBP eCLIP29.8■■■□□ 2.36
CTDNEP1-209ENST00000574205 FXNQ16595 210 aa29.8■■■□□ 2.36
CTDNEP1-209ENST00000574205 NSUN5P2Q63ZY6 315 aa29.8■■■□□ 2.36
CTDNEP1-209ENST00000574205 CCDC120Q96HB5 630 aa29.8■■■□□ 2.36
CTDNEP1-209ENST00000574205 WFDC6Q9BQY6 131 aa29.8■■■□□ 2.36
CTDNEP1-209ENST00000574205 TTYH2Q9BSA4 534 aa29.8■■■□□ 2.36
CTDNEP1-209ENST00000574205 SLC9A8Q9Y2E8 581 aa29.8■■■□□ 2.36
CTDNEP1-209ENST00000574205 PCNX1Q96RV3 2341 aa29.8■■■□□ 2.36
CTDNEP1-209ENST00000574205 CLEC18AA5D8T8 446 aa29.79■■■□□ 2.36
CTDNEP1-209ENST00000574205 M0R3H8 397 aa29.79■■■□□ 2.36
CTDNEP1-209ENST00000574205 ADAMDEC1O15204 470 aa29.79■■■□□ 2.36
CTDNEP1-209ENST00000574205 AGFG2O95081 481 aa29.79■■■□□ 2.36
CTDNEP1-209ENST00000574205 OPN1LWP04000 364 aa29.79■■■□□ 2.36
CTDNEP1-209ENST00000574205 FKBP2P26885 142 aaKnown RBP29.79■■■□□ 2.36
CTDNEP1-209ENST00000574205 MAP2K6P52564 334 aa29.79■■■□□ 2.36
CTDNEP1-209ENST00000574205 SELENOWP63302 87 aa29.79■■■□□ 2.36
CTDNEP1-209ENST00000574205 CTU2Q2VPK5 515 aaKnown RBP29.79■■■□□ 2.36
CTDNEP1-209ENST00000574205 CLEC18BQ6UXF7 455 aa29.79■■■□□ 2.36
CTDNEP1-209ENST00000574205 RPTNQ6XPR3 784 aa29.79■■■□□ 2.36
CTDNEP1-209ENST00000574205 ADGRG3Q86Y34 549 aa29.79■■■□□ 2.36
CTDNEP1-209ENST00000574205 LACC1Q8IV20 430 aa29.79■■■□□ 2.36
CTDNEP1-209ENST00000574205 CLEC18CQ8NCF0 446 aa29.79■■■□□ 2.36
CTDNEP1-209ENST00000574205 ATP6V1C2Q8NEY4 427 aa29.79■■■□□ 2.36
CTDNEP1-209ENST00000574205 ADGRG7Q96K78 797 aa29.79■■■□□ 2.36
CTDNEP1-209ENST00000574205 TRIB1Q96RU8 372 aa29.79■■■□□ 2.36
CTDNEP1-209ENST00000574205 ZNF559Q9BR84 538 aa29.79■■■□□ 2.36
CTDNEP1-209ENST00000574205 CALHM2Q9HA72 323 aa29.79■■■□□ 2.36
CTDNEP1-209ENST00000574205 ADPRHL2Q9NX46 363 aa29.79■■■□□ 2.36
CTDNEP1-209ENST00000574205 CD8B2A6NJW9 211 aa29.78■■■□□ 2.36
CTDNEP1-209ENST00000574205 CLCA1A8K7I4 914 aa29.78■■■□□ 2.36
CTDNEP1-209ENST00000574205 TMEM229AB2RXF0 380 aa29.78■■■□□ 2.36
CTDNEP1-209ENST00000574205 GMNNO75496 209 aa29.78■■■□□ 2.36
CTDNEP1-209ENST00000574205 NCK1P16333 377 aa29.78■■■□□ 2.36
CTDNEP1-209ENST00000574205 CBX1P83916 185 aa29.78■■■□□ 2.36
CTDNEP1-209ENST00000574205 CEACAM7Q14002 265 aa29.78■■■□□ 2.36
CTDNEP1-209ENST00000574205 TMEM176BQ3YBM2 270 aaPredicted RBP29.78■■■□□ 2.36
CTDNEP1-209ENST00000574205 GLYATQ6IB77 296 aa29.78■■■□□ 2.36
CTDNEP1-209ENST00000574205 MARVELD2Q8N4S9 558 aa29.78■■■□□ 2.36
CTDNEP1-209ENST00000574205 OR52E4Q8NGH9 312 aa29.78■■■□□ 2.36
CTDNEP1-209ENST00000574205 LZICQ8WZA0 190 aa29.78■■■□□ 2.36
CTDNEP1-209ENST00000574205 FAM162AQ96A26 154 aa29.78■■■□□ 2.36
CTDNEP1-209ENST00000574205 UCN2Q96RP3 112 aa29.78■■■□□ 2.36
CTDNEP1-209ENST00000574205 TRIM2Q9C040 744 aa29.78■■■□□ 2.36
CTDNEP1-209ENST00000574205 PAQR5Q9NXK6 330 aaPredicted RBP29.78■■■□□ 2.36
CTDNEP1-209ENST00000574205 PRPF19Q9UMS4 504 aaKnown RBP29.78■■■□□ 2.36
CTDNEP1-209ENST00000574205 SH3GLB1Q9Y371 365 aa29.78■■■□□ 2.36
CTDNEP1-209ENST00000574205 TMED7-TICAM2A0A0A6YYA0 188 aa29.77■■■□□ 2.36
CTDNEP1-209ENST00000574205 FMO6PO60774 539 aa29.77■■■□□ 2.36
CTDNEP1-209ENST00000574205 HTR2AP28223 471 aa29.77■■■□□ 2.36
CTDNEP1-209ENST00000574205 SHC1P29353 583 aa29.77■■■□□ 2.36
CTDNEP1-209ENST00000574205 PDSS1Q5T2R2 415 aa29.77■■■□□ 2.36
CTDNEP1-209ENST00000574205 C6orf89Q6UWU4 347 aa29.77■■■□□ 2.36
CTDNEP1-209ENST00000574205 OR6T1Q8NGN1 323 aa29.77■■■□□ 2.36
CTDNEP1-209ENST00000574205 C3orf49Q96BT1 292 aa29.77■■■□□ 2.36
CTDNEP1-209ENST00000574205 RPS6KB2Q9UBS0 482 aa29.77■■■□□ 2.36
CTDNEP1-209ENST00000574205 MAGEL2Q9UJ55 1249 aa29.77■■■□□ 2.36
CTDNEP1-209ENST00000574205 TMED7Q9Y3B3 224 aa29.77■■■□□ 2.36
CTDNEP1-209ENST00000574205 A0A0J9YW62 118 aa29.76■■■□□ 2.36
CTDNEP1-209ENST00000574205 TNFSF11O14788 317 aa29.76■■■□□ 2.36
CTDNEP1-209ENST00000574205 EIF1AXP47813 144 aaKnown RBP29.76■■■□□ 2.36
CTDNEP1-209ENST00000574205 PMPCAQ10713 525 aa29.76■■■□□ 2.36
CTDNEP1-209ENST00000574205 BNIP1Q12981 228 aa29.76■■■□□ 2.36
CTDNEP1-209ENST00000574205 SYT14P1Q58G82 188 aa29.76■■■□□ 2.36
CTDNEP1-209ENST00000574205 NCCRP1Q6ZVX7 275 aaPredicted RBP29.76■■■□□ 2.36
CTDNEP1-209ENST00000574205 CBLL1Q75N03 491 aa29.76■■■□□ 2.36
CTDNEP1-209ENST00000574205 OR2V1Q8NHB1 315 aa29.76■■■□□ 2.36
CTDNEP1-209ENST00000574205 VANGL1Q8TAA9 524 aaPredicted RBP29.76■■■□□ 2.36
CTDNEP1-209ENST00000574205 TPD52L3Q96J77 140 aa29.76■■■□□ 2.36
CTDNEP1-209ENST00000574205 CLCF1Q9UBD9 225 aa29.76■■■□□ 2.36
CTDNEP1-209ENST00000574205 TPST2O60704 377 aa29.76■■■□□ 2.35
CTDNEP1-209ENST00000574205 SERPINA1P01009 418 aa29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms