RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 PTGES2Q9H7Z7 377 aa12.45□□□□□ -0.42
CCDC40-209ENST00000573474 PROK2Q9HC23 129 aa12.45□□□□□ -0.42
CCDC40-209ENST00000573474 TIMMDC1Q9NPL8 285 aa12.45□□□□□ -0.42
CCDC40-209ENST00000573474 GPR83Q9NYM4 423 aa12.45□□□□□ -0.42
CCDC40-209ENST00000573474 LRFN1Q9P244 771 aa12.45□□□□□ -0.42
CCDC40-209ENST00000573474 REV1Q9UBZ9 1251 aa12.45□□□□□ -0.42
CCDC40-209ENST00000573474 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.44□□□□□ -0.42
CCDC40-209ENST00000573474 FAM47E-STBD1D6RA91 191 aa12.44□□□□□ -0.42
CCDC40-209ENST00000573474 SNPHO15079 494 aa12.44□□□□□ -0.42
CCDC40-209ENST00000573474 EFSO43281 561 aa12.44□□□□□ -0.42
CCDC40-209ENST00000573474 KLF4O43474 513 aa12.44□□□□□ -0.42
CCDC40-209ENST00000573474 WDPCPO95876 746 aa12.44□□□□□ -0.42
CCDC40-209ENST00000573474 IFI30P13284 250 aa12.44□□□□□ -0.42
CCDC40-209ENST00000573474 CNR1P21554 472 aa12.44□□□□□ -0.42
CCDC40-209ENST00000573474 CXCR1P25024 350 aa12.44□□□□□ -0.42
CCDC40-209ENST00000573474 POLR2IP36954 125 aaKnown RBP12.44□□□□□ -0.42
CCDC40-209ENST00000573474 ID4P47928 161 aa12.44□□□□□ -0.42
CCDC40-209ENST00000573474 CCL11P51671 97 aa12.44□□□□□ -0.42
CCDC40-209ENST00000573474 ZNF41P51814 821 aaPredicted RBP12.44□□□□□ -0.42
CCDC40-209ENST00000573474 ALDH6A1Q02252 535 aaKnown RBP12.44□□□□□ -0.42
CCDC40-209ENST00000573474 DEFB109BQ30KR1 87 aa12.44□□□□□ -0.42
CCDC40-209ENST00000573474 LINC00696Q6ZRV3 163 aa12.44□□□□□ -0.42
CCDC40-209ENST00000573474 USP51Q70EK9 711 aa12.44□□□□□ -0.42
CCDC40-209ENST00000573474 ZNF227Q86WZ6 799 aa12.44□□□□□ -0.42
CCDC40-209ENST00000573474 CHERPQ8IWX8 916 aaKnown RBP12.44□□□□□ -0.42
CCDC40-209ENST00000573474 MARVELD2Q8N4S9 558 aa12.44□□□□□ -0.42
CCDC40-209ENST00000573474 WDSUB1Q8N9V3 476 aa12.44□□□□□ -0.42
CCDC40-209ENST00000573474 PSD4Q8NDX1 1056 aa12.44□□□□□ -0.42
CCDC40-209ENST00000573474 PFN4Q8NHR9 129 aa12.44□□□□□ -0.42
CCDC40-209ENST00000573474 CNBD2Q96M20 576 aa12.44□□□□□ -0.42
CCDC40-209ENST00000573474 GPA33Q99795 319 aa12.44□□□□□ -0.42
CCDC40-209ENST00000573474 TMEM43Q9BTV4 400 aa12.44□□□□□ -0.42
CCDC40-209ENST00000573474 MED17Q9NVC6 651 aa12.44□□□□□ -0.42
CCDC40-209ENST00000573474 DKK4Q9UBT3 224 aa12.44□□□□□ -0.42
CCDC40-209ENST00000573474 OSGIN1Q9UJX0 560 aa12.44□□□□□ -0.42
CCDC40-209ENST00000573474 A0A087WZY1 265 aa12.43□□□□□ -0.42
CCDC40-209ENST00000573474 TMED7-TICAM2A0A0A6YYA0 188 aa12.43□□□□□ -0.42
CCDC40-209ENST00000573474 B4DXG7 233 aa12.43□□□□□ -0.42
CCDC40-209ENST00000573474 E9PQ18 207 aa12.43□□□□□ -0.42
CCDC40-209ENST00000573474 ETV2O00321 342 aaPredicted RBP12.43□□□□□ -0.42
CCDC40-209ENST00000573474 KPNA4O00629 521 aaPredicted RBP12.43□□□□□ -0.42
CCDC40-209ENST00000573474 GNB5O14775 395 aa12.43□□□□□ -0.42
CCDC40-209ENST00000573474 BCKDKO14874 412 aa12.43□□□□□ -0.42
CCDC40-209ENST00000573474 TRIM3O75382 744 aaPredicted RBP12.43□□□□□ -0.42
CCDC40-209ENST00000573474 IGF2P01344 180 aa12.43□□□□□ -0.42
CCDC40-209ENST00000573474 PRKCAP17252 672 aa12.43□□□□□ -0.42
CCDC40-209ENST00000573474 MAKP20794 623 aa12.43□□□□□ -0.42
CCDC40-209ENST00000573474 MYF6P23409 242 aa12.43□□□□□ -0.42
CCDC40-209ENST00000573474 APOBEC1P41238 236 aaKnown RBP12.43□□□□□ -0.42
CCDC40-209ENST00000573474 GPR4P46093 362 aa12.43□□□□□ -0.42
CCDC40-209ENST00000573474 MASP1P48740 699 aa12.43□□□□□ -0.42
CCDC40-209ENST00000573474 RPS6KA3P51812 740 aa12.43□□□□□ -0.42
CCDC40-209ENST00000573474 CRISP1P54107 249 aa12.43□□□□□ -0.42
CCDC40-209ENST00000573474 MFAP5Q13361 173 aa12.43□□□□□ -0.42
CCDC40-209ENST00000573474 IL18R1Q13478 541 aa12.43□□□□□ -0.42
CCDC40-209ENST00000573474 RAPSNQ13702 412 aa12.43□□□□□ -0.42
CCDC40-209ENST00000573474 KEAP1Q14145 624 aa12.43□□□□□ -0.42
CCDC40-209ENST00000573474 PDK3Q15120 406 aa12.43□□□□□ -0.42
CCDC40-209ENST00000573474 OR1C1Q15619 314 aa12.43□□□□□ -0.42
CCDC40-209ENST00000573474 SLC25A53Q5H9E4 307 aa12.43□□□□□ -0.42
CCDC40-209ENST00000573474 TIGD3Q6B0B8 471 aa12.43□□□□□ -0.42
CCDC40-209ENST00000573474 ARSKQ6UWY0 536 aa12.43□□□□□ -0.42
CCDC40-209ENST00000573474 RASSF6Q6ZTQ3 369 aa12.43□□□□□ -0.42
CCDC40-209ENST00000573474 TMPRSS11FQ6ZWK6 438 aa12.43□□□□□ -0.42
CCDC40-209ENST00000573474 OR1J4Q8NGS1 313 aa12.43□□□□□ -0.42
CCDC40-209ENST00000573474 BPIFA2Q96DR5 249 aa12.43□□□□□ -0.42
CCDC40-209ENST00000573474 C1GALT1C1Q96EU7 318 aa12.43□□□□□ -0.42
CCDC40-209ENST00000573474 ZNF570Q96NI8 536 aa12.43□□□□□ -0.42
CCDC40-209ENST00000573474 RNF32Q9H0A6 362 aa12.43□□□□□ -0.42
CCDC40-209ENST00000573474 CCDC86Q9H6F5 360 aaKnown RBP12.43□□□□□ -0.42
CCDC40-209ENST00000573474 ZNF552Q9H707 407 aaPredicted RBP12.43□□□□□ -0.42
CCDC40-209ENST00000573474 MEPEQ9NQ76 525 aaPredicted RBP12.43□□□□□ -0.42
CCDC40-209ENST00000573474 C20orf141Q9NUB4 165 aa12.43□□□□□ -0.42
CCDC40-209ENST00000573474 PLA2G3Q9NZ20 509 aa12.43□□□□□ -0.42
CCDC40-209ENST00000573474 FBXL2Q9UKC9 423 aa12.43□□□□□ -0.42
CCDC40-209ENST00000573474 NDRG4Q9ULP0 352 aaKnown RBP12.43□□□□□ -0.42
CCDC40-209ENST00000573474 SSUH2Q9Y2M2 353 aa12.43□□□□□ -0.42
CCDC40-209ENST00000573474 TMED7Q9Y3B3 224 aa12.43□□□□□ -0.42
CCDC40-209ENST00000573474 HRH3Q9Y5N1 445 aa12.43□□□□□ -0.42
CCDC40-209ENST00000573474 GMPPBQ9Y5P6 360 aa12.43□□□□□ -0.42
CCDC40-209ENST00000573474 HEATR5AQ86XA9 2040 aa12.42□□□□□ -0.42
CCDC40-209ENST00000573474 IGKV1D-42A0A075B6H8 117 aa12.42□□□□□ -0.42
CCDC40-209ENST00000573474 UNC119BA6NIH7 251 aa12.42□□□□□ -0.42
CCDC40-209ENST00000573474 EFCAB9A8MZ26 197 aa12.42□□□□□ -0.42
CCDC40-209ENST00000573474 G3V3Y1 287 aa12.42□□□□□ -0.42
CCDC40-209ENST00000573474 CBR3O75828 277 aa12.42□□□□□ -0.42
CCDC40-209ENST00000573474 NEURL1O76050 574 aa12.42□□□□□ -0.42
CCDC40-209ENST00000573474 F10P00742 488 aa12.42□□□□□ -0.42
CCDC40-209ENST00000573474 TP53P04637 393 aaPredicted RBP12.42□□□□□ -0.42
CCDC40-209ENST00000573474 GNAO1P09471 354 aa12.42□□□□□ -0.42
CCDC40-209ENST00000573474 PTNP21246 168 aa12.42□□□□□ -0.42
CCDC40-209ENST00000573474 CHMP24386 653 aa12.42□□□□□ -0.42
CCDC40-209ENST00000573474 TPD52P55327 224 aaPredicted RBP12.42□□□□□ -0.42
CCDC40-209ENST00000573474 CRYZQ08257 329 aaKnown RBP12.42□□□□□ -0.42
CCDC40-209ENST00000573474 INPP5JQ15735 1006 aaPredicted RBP12.42□□□□□ -0.42
CCDC40-209ENST00000573474 PLPPR5Q32ZL2 321 aa12.42□□□□□ -0.42
CCDC40-209ENST00000573474 SPINK14Q6IE38 97 aa12.42□□□□□ -0.42
CCDC40-209ENST00000573474 MEX3DQ86XN8 651 aaKnown RBP12.42□□□□□ -0.42
CCDC40-209ENST00000573474 ADGRG3Q86Y34 549 aa12.42□□□□□ -0.42
CCDC40-209ENST00000573474 P3H2Q8IVL5 708 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms