RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 PAQR5Q9NXK6 330 aaPredicted RBP6.67□□□□□ -1.34
NUP88-205ENST00000572809 GALNT8Q9NY28 637 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 MARCOQ9UEW3 520 aaPredicted RBP6.67□□□□□ -1.34
NUP88-205ENST00000572809 NDRG3Q9UGV2 375 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 ICAM5Q9UMF0 924 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 CARD8Q9Y2G2 431 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 FBN2P35556 2912 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 A0A0J9YW62 118 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 RNF103-CHMP3A0A140T963 221 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 SHISA3A0PJX4 238 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 SERINC4A6NH21 518 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 E9PBE3 544 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 NPIPB9F8W1W9 429 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 ZNF195O14628 629 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 CASKO14936 926 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 ADAMDEC1O15204 470 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 ZNF264O43296 627 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 EFNA2O43921 213 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 CXCL13O43927 109 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 EIF4E2O60573 245 aaKnown RBP6.66□□□□□ -1.34
NUP88-205ENST00000572809 STX11O75558 287 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 UGT2B17O75795 530 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 AQP8O94778 261 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 SYNGR4O95473 234 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 CGAP01215 116 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 ALDOCP09972 364 aaKnown RBP6.66□□□□□ -1.34
NUP88-205ENST00000572809 OR12D1P0DN82 309 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 ME2P23368 584 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 CARD18P57730 90 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 SIRPAP78324 504 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 FAM27E3Q08E93 113 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 LRRC74AQ0VAA2 488 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 FGFBP1Q14512 234 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 ZNF141Q15928 474 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 FAM174BQ3ZCQ3 159 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.66□□□□□ -1.34
NUP88-205ENST00000572809 PDZK1Q5T2W1 519 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 ATAD3BQ5T9A4 648 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 AGBL2Q5U5Z8 902 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 SAXO2Q658L1 398 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 HBMQ6B0K9 141 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 NXNQ6DKJ4 435 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 HEPHL1Q6MZM0 1159 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 PPP4R4Q6NUP7 873 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 VWA1Q6PCB0 445 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 ZNF474Q6S9Z5 364 aaPredicted RBP6.66□□□□□ -1.34
NUP88-205ENST00000572809 ZNF621Q6ZSS3 439 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 ESPNLQ6ZVH7 1005 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 C16orf62Q7Z3J2 963 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 THAP5Q7Z6K1 395 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 THNSL2Q86YJ6 484 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 ZNF610Q8N9Z0 462 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 OR10D3Q8NH80 312 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 OR2V1Q8NHB1 315 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 RFWD2Q8NHY2 731 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 MIPOL1Q8TD10 442 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 GPR119Q8TDV5 335 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 ZNF75CPQ92670 426 aaPredicted RBP6.66□□□□□ -1.34
NUP88-205ENST00000572809 NRGNQ92686 78 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 OSTF1Q92882 214 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 ADGRG7Q96K78 797 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 DACH2Q96NX9 599 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 OR52E6Q96RD3 313 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 KLHDC3Q9BQ90 382 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 NMUR2Q9GZQ4 415 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 SERHL2Q9H4I8 314 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 PLSCR4Q9NRQ2 329 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 AIG1Q9NVV5 245 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 ELOVL5Q9NYP7 299 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 BTNL2Q9UIR0 455 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 MKLN1Q9UL63 735 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 MCTS1Q9ULC4 181 aaKnown RBP6.66□□□□□ -1.34
NUP88-205ENST00000572809 EDARQ9UNE0 448 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 GPR45Q9Y5Y3 372 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 DCHS2Q6V1P9 2916 aa6.66□□□□□ -1.34
NUP88-205ENST00000572809 CSMD1Q96PZ7 3565 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 MED12LQ86YW9 2145 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 SH3D21A4FU49 640 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 CCDC154A6NI56 674 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 DBX1A6NMT0 343 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 GJE1A6NN92 205 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 TNFSF11O14788 317 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 KLF11O14901 512 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 SLC22A3O75751 556 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 CYP7B1O75881 506 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 PLGP00747 810 aaPredicted RBP6.65□□□□□ -1.34
NUP88-205ENST00000572809 CSTAP01040 98 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 GUSBP08236 651 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 PABPC4LP0CB38 370 aaKnown RBP6.65□□□□□ -1.34
NUP88-205ENST00000572809 CD8BP10966 210 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 UBL4AP11441 157 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 FCGR2AP12318 317 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 POU2F1P14859 743 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 PRKCAP17252 672 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 IL11P20809 199 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 IL12AP29459 219 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 SFTPDP35247 375 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 CHI3L1P36222 383 aaPredicted RBP6.65□□□□□ -1.34
NUP88-205ENST00000572809 CPOXP36551 454 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 CD79BP40259 229 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms