RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 PRAMEF27A3QJZ7 478 aa15.37■□□□□ 0.05
LITAF-211ENST00000572255 ZNF814B7Z6K7 855 aa15.37■□□□□ 0.05
LITAF-211ENST00000572255 C9JVG2 144 aa15.37■□□□□ 0.05
LITAF-211ENST00000572255 HMGN4O00479 90 aa15.37■□□□□ 0.05
LITAF-211ENST00000572255 FESP07332 822 aa15.37■□□□□ 0.05
LITAF-211ENST00000572255 PTH2RP49190 550 aa15.37■□□□□ 0.05
LITAF-211ENST00000572255 DIO1P49895 249 aa15.37■□□□□ 0.05
LITAF-211ENST00000572255 WDR4P57081 412 aaKnown RBP15.37■□□□□ 0.05
LITAF-211ENST00000572255 HPCAP84074 193 aa15.37■□□□□ 0.05
LITAF-211ENST00000572255 CHRNEQ04844 493 aa15.37■□□□□ 0.05
LITAF-211ENST00000572255 LTBQ06643 244 aa15.37■□□□□ 0.05
LITAF-211ENST00000572255 TAB1Q15750 504 aa15.37■□□□□ 0.05
LITAF-211ENST00000572255 SYT14P1Q58G82 188 aa15.37■□□□□ 0.05
LITAF-211ENST00000572255 CLEC9AQ6UXN8 241 aa15.37■□□□□ 0.05
LITAF-211ENST00000572255 TMPPEQ6ZT21 453 aa15.37■□□□□ 0.05
LITAF-211ENST00000572255 SPATA19Q7Z5L4 167 aa15.37■□□□□ 0.05
LITAF-211ENST00000572255 ZNF611Q8N823 705 aa15.37■□□□□ 0.05
LITAF-211ENST00000572255 ZNF563Q8TA94 476 aa15.37■□□□□ 0.05
LITAF-211ENST00000572255 RAB3IL1Q8TBN0 382 aa15.37■□□□□ 0.05
LITAF-211ENST00000572255 TMEM171Q8WVE6 324 aa15.37■□□□□ 0.05
LITAF-211ENST00000572255 ZNF775Q96BV0 537 aaPredicted RBP15.37■□□□□ 0.05
LITAF-211ENST00000572255 COX4I2Q96KJ9 171 aa15.37■□□□□ 0.05
LITAF-211ENST00000572255 ZNF300Q96RE9 604 aaPredicted RBP15.37■□□□□ 0.05
LITAF-211ENST00000572255 CCDC106Q9BWC9 280 aa15.37■□□□□ 0.05
LITAF-211ENST00000572255 PRSS50Q9UI38 385 aa15.37■□□□□ 0.05
LITAF-211ENST00000572255 SPIN1Q9Y657 262 aaPredicted RBP15.37■□□□□ 0.05
LITAF-211ENST00000572255 USF3Q68DE3 2245 aa15.37■□□□□ 0.05
LITAF-211ENST00000572255 TLN2Q9Y4G6 2542 aa15.37■□□□□ 0.05
LITAF-211ENST00000572255 CCDC154A6NI56 674 aa15.36■□□□□ 0.05
LITAF-211ENST00000572255 CLDN24A6NM45 220 aa15.36■□□□□ 0.05
LITAF-211ENST00000572255 ZNF724A8MTY0 619 aa15.36■□□□□ 0.05
LITAF-211ENST00000572255 H7C1Q1 480 aa15.36■□□□□ 0.05
LITAF-211ENST00000572255 SULT2B1O00204 365 aa15.36■□□□□ 0.05
LITAF-211ENST00000572255 TFPIP10646 304 aa15.36■□□□□ 0.05
LITAF-211ENST00000572255 IL12AP29459 219 aa15.36■□□□□ 0.05
LITAF-211ENST00000572255 RYKP34925 604 aa15.36■□□□□ 0.05
LITAF-211ENST00000572255 APOBEC1P41238 236 aaKnown RBP15.36■□□□□ 0.05
LITAF-211ENST00000572255 CSNK2A1P68400 391 aaPredicted RBP15.36■□□□□ 0.05
LITAF-211ENST00000572255 PLAURQ03405 335 aa15.36■□□□□ 0.05
LITAF-211ENST00000572255 ITGADQ13349 1161 aa15.36■□□□□ 0.05
LITAF-211ENST00000572255 Q6ZT83 130 aa15.36■□□□□ 0.05
LITAF-211ENST00000572255 BHLHA15Q7RTS1 189 aaPredicted RBP15.36■□□□□ 0.05
LITAF-211ENST00000572255 RNF130Q86XS8 419 aa15.36■□□□□ 0.05
LITAF-211ENST00000572255 CIARTQ8N365 385 aaPredicted RBP15.36■□□□□ 0.05
LITAF-211ENST00000572255 ARFGAP2Q8N6H7 521 aa15.36■□□□□ 0.05
LITAF-211ENST00000572255 TRIML2Q8N7C3 387 aa15.36■□□□□ 0.05
LITAF-211ENST00000572255 HSD17B8Q92506 261 aa15.36■□□□□ 0.05
LITAF-211ENST00000572255 AKAP1Q92667 903 aaKnown RBP eCLIP15.36■□□□□ 0.05
LITAF-211ENST00000572255 ZNF75CPQ92670 426 aaPredicted RBP15.36■□□□□ 0.05
LITAF-211ENST00000572255 PANX1Q96RD7 426 aa15.36■□□□□ 0.05
LITAF-211ENST00000572255 USB1Q9BQ65 265 aaKnown RBP15.36■□□□□ 0.05
LITAF-211ENST00000572255 INPP5KQ9BT40 448 aa15.36■□□□□ 0.05
LITAF-211ENST00000572255 POTEKPQ9BYX7 375 aa15.36■□□□□ 0.05
LITAF-211ENST00000572255 WDR55Q9H6Y2 383 aaPredicted RBP15.36■□□□□ 0.05
LITAF-211ENST00000572255 NGBQ9NPG2 151 aa15.36■□□□□ 0.05
LITAF-211ENST00000572255 EXOSC3Q9NQT5 275 aaKnown RBP15.36■□□□□ 0.05
LITAF-211ENST00000572255 CTPS2Q9NRF8 586 aa15.36■□□□□ 0.05
LITAF-211ENST00000572255 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.36■□□□□ 0.05
LITAF-211ENST00000572255 CHRNA9Q9UGM1 479 aa15.36■□□□□ 0.05
LITAF-211ENST00000572255 RNF115Q9Y4L5 304 aa15.36■□□□□ 0.05
LITAF-211ENST00000572255 GPR45Q9Y5Y3 372 aa15.36■□□□□ 0.05
LITAF-211ENST00000572255 GOLGA8QA0A0J9YX86 632 aa15.35■□□□□ 0.05
LITAF-211ENST00000572255 TMEM120BA0PK00 339 aa15.35■□□□□ 0.05
LITAF-211ENST00000572255 GOLGA8OA6NCC3 632 aa15.35■□□□□ 0.05
LITAF-211ENST00000572255 FAM171A2A8MVW0 826 aa15.35■□□□□ 0.05
LITAF-211ENST00000572255 GOLGA8NF8WBI6 632 aa15.35■□□□□ 0.05
LITAF-211ENST00000572255 HDAC3O15379 428 aa15.35■□□□□ 0.05
LITAF-211ENST00000572255 SNNO75324 88 aaPredicted RBP15.35■□□□□ 0.05
LITAF-211ENST00000572255 PGRP06401 933 aa15.35■□□□□ 0.05
LITAF-211ENST00000572255 PAX1P15863 534 aa15.35■□□□□ 0.05
LITAF-211ENST00000572255 EDNRAP25101 427 aa15.35■□□□□ 0.05
LITAF-211ENST00000572255 EPHA3P29320 983 aa15.35■□□□□ 0.05
LITAF-211ENST00000572255 CDKN2CP42773 168 aa15.35■□□□□ 0.05
LITAF-211ENST00000572255 KCNJ10P78508 379 aa15.35■□□□□ 0.05
LITAF-211ENST00000572255 CAPRIN1Q14444 709 aaKnown RBP15.35■□□□□ 0.05
LITAF-211ENST00000572255 SYPL1Q16563 259 aa15.35■□□□□ 0.05
LITAF-211ENST00000572255 NCMAPQ5T1S8 102 aa15.35■□□□□ 0.05
LITAF-211ENST00000572255 ABLIM2Q6H8Q1 611 aa15.35■□□□□ 0.05
LITAF-211ENST00000572255 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.35■□□□□ 0.05
LITAF-211ENST00000572255 GRINAQ7Z429 371 aa15.35■□□□□ 0.05
LITAF-211ENST00000572255 GALNT5Q7Z7M9 940 aa15.35■□□□□ 0.05
LITAF-211ENST00000572255 ANKFN1Q8N957 763 aa15.35■□□□□ 0.05
LITAF-211ENST00000572255 MGARPQ8TDB4 240 aa15.35■□□□□ 0.05
LITAF-211ENST00000572255 CNOT9Q92600 299 aaKnown RBP15.35■□□□□ 0.05
LITAF-211ENST00000572255 TRNT1Q96Q11 434 aaKnown RBP15.35■□□□□ 0.05
LITAF-211ENST00000572255 OR52E6Q96RD3 313 aa15.35■□□□□ 0.05
LITAF-211ENST00000572255 ZBTB18Q99592 522 aa15.35■□□□□ 0.05
LITAF-211ENST00000572255 BDH2Q9BUT1 245 aa15.35■□□□□ 0.05
LITAF-211ENST00000572255 SLC38A1Q9H2H9 487 aa15.35■□□□□ 0.05
LITAF-211ENST00000572255 CXorf56Q9H5V9 222 aa15.35■□□□□ 0.05
LITAF-211ENST00000572255 ESRP2Q9H6T0 727 aaKnown RBP15.35■□□□□ 0.05
LITAF-211ENST00000572255 ZNF701Q9NV72 531 aaPredicted RBP15.35■□□□□ 0.05
LITAF-211ENST00000572255 THAP1Q9NVV9 213 aa15.35■□□□□ 0.05
LITAF-211ENST00000572255 LIPT1Q9Y234 373 aa15.35■□□□□ 0.05
LITAF-211ENST00000572255 TRIM64A6NGJ6 449 aa15.34■□□□□ 0.05
LITAF-211ENST00000572255 TRIM64BA6NI03 449 aa15.34■□□□□ 0.05
LITAF-211ENST00000572255 TRPC5OSA6NMA1 111 aa15.34■□□□□ 0.05
LITAF-211ENST00000572255 CLOCKO15516 846 aa15.34■□□□□ 0.05
LITAF-211ENST00000572255 TMCC2O75069 709 aa15.34■□□□□ 0.05
LITAF-211ENST00000572255 ADAM11O75078 769 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms