RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 GKN2Q86XP6 184 aa15□□□□□ -0.01
RAB40B-206ENST00000571995 C19orf47Q8N9M1 422 aaKnown RBP15□□□□□ -0.01
RAB40B-206ENST00000571995 TAPBPLQ9BX59 468 aa15□□□□□ -0.01
RAB40B-206ENST00000571995 BARHL1Q9BZE3 327 aa15□□□□□ -0.01
RAB40B-206ENST00000571995 COQ9O75208 318 aa14.99□□□□□ -0.01
RAB40B-206ENST00000571995 RECKO95980 971 aa14.99□□□□□ -0.01
RAB40B-206ENST00000571995 AGR2O95994 175 aa14.99□□□□□ -0.01
RAB40B-206ENST00000571995 MT-ND5P03915 603 aa14.99□□□□□ -0.01
RAB40B-206ENST00000571995 C11orf88Q6PI97 169 aa14.99□□□□□ -0.01
RAB40B-206ENST00000571995 RTL10Q7L3V2 364 aa14.99□□□□□ -0.01
RAB40B-206ENST00000571995 FYTTD1Q96QD9 318 aaKnown RBP14.99□□□□□ -0.01
RAB40B-206ENST00000571995 DCLRE1CQ96SD1 692 aaKnown RBP14.99□□□□□ -0.01
RAB40B-206ENST00000571995 CDCA3Q99618 268 aaPredicted RBP14.99□□□□□ -0.01
RAB40B-206ENST00000571995 ELL3Q9HB65 397 aaPredicted RBP14.99□□□□□ -0.01
RAB40B-206ENST00000571995 MAN2C1Q9NTJ4 1040 aa14.99□□□□□ -0.01
RAB40B-206ENST00000571995 TRIM64A6NGJ6 449 aa14.99□□□□□ -0.01
RAB40B-206ENST00000571995 SNRPBP14678 240 aaKnown RBP14.99□□□□□ -0.01
RAB40B-206ENST00000571995 MLLT11Q13015 90 aaPredicted RBP14.99□□□□□ -0.01
RAB40B-206ENST00000571995 SF3B4Q15427 424 aaKnown RBP eCLIP14.99□□□□□ -0.01
RAB40B-206ENST00000571995 CARD17Q5XLA6 110 aa14.99□□□□□ -0.01
RAB40B-206ENST00000571995 METAP1DQ6UB28 335 aaPredicted RBP14.99□□□□□ -0.01
RAB40B-206ENST00000571995 METTL21AQ8WXB1 218 aa14.99□□□□□ -0.01
RAB40B-206ENST00000571995 MOAP1Q96BY2 351 aa14.99□□□□□ -0.01
RAB40B-206ENST00000571995 PLCXD1Q9NUJ7 323 aa14.99□□□□□ -0.01
RAB40B-206ENST00000571995 CHST2Q9Y4C5 530 aa14.99□□□□□ -0.01
RAB40B-206ENST00000571995 PCDHGB1Q9Y5G3 927 aa14.99□□□□□ -0.01
RAB40B-206ENST00000571995 ANKRD33BA6NCL7 494 aa14.99□□□□□ -0.01
RAB40B-206ENST00000571995 E2F1Q01094 437 aa14.99□□□□□ -0.01
RAB40B-206ENST00000571995 CCDC92Q53HC0 331 aaPredicted RBP14.99□□□□□ -0.01
RAB40B-206ENST00000571995 SFRP4Q6FHJ7 346 aaPredicted RBP14.99□□□□□ -0.01
RAB40B-206ENST00000571995 MED25Q71SY5 747 aa14.99□□□□□ -0.01
RAB40B-206ENST00000571995 DNAJC5GQ8N7S2 189 aa14.99□□□□□ -0.01
RAB40B-206ENST00000571995 OR5W2Q8NH69 310 aa14.99□□□□□ -0.01
RAB40B-206ENST00000571995 NUDT22Q9BRQ3 303 aa14.99□□□□□ -0.01
RAB40B-206ENST00000571995 KATNB1Q9BVA0 655 aa14.99□□□□□ -0.01
RAB40B-206ENST00000571995 C11orf54Q9H0W9 315 aaPredicted RBP14.99□□□□□ -0.01
RAB40B-206ENST00000571995 ABCG5Q9H222 651 aa14.99□□□□□ -0.01
RAB40B-206ENST00000571995 RANGRFQ9HD47 186 aaPredicted RBP14.99□□□□□ -0.01
RAB40B-206ENST00000571995 MRPL39Q9NYK5 338 aaKnown RBP14.99□□□□□ -0.01
RAB40B-206ENST00000571995 KLK4Q9Y5K2 254 aa14.99□□□□□ -0.01
RAB40B-206ENST00000571995 SPARCP09486 303 aa14.98□□□□□ -0.01
RAB40B-206ENST00000571995 SLC6A6P31641 620 aa14.98□□□□□ -0.01
RAB40B-206ENST00000571995 ARRB1P49407 418 aaPredicted RBP14.98□□□□□ -0.01
RAB40B-206ENST00000571995 TRA2BP62995 288 aaKnown RBP14.98□□□□□ -0.01
RAB40B-206ENST00000571995 FOXK2Q01167 660 aa14.98□□□□□ -0.01
RAB40B-206ENST00000571995 PLCXD2Q0VAA5 305 aa14.98□□□□□ -0.01
RAB40B-206ENST00000571995 SENP5Q96HI0 755 aaPredicted RBP14.98□□□□□ -0.01
RAB40B-206ENST00000571995 CDCA4Q9BXL8 241 aa14.98□□□□□ -0.01
RAB40B-206ENST00000571995 EVA1BQ9NVM1 165 aa14.98□□□□□ -0.01
RAB40B-206ENST00000571995 PLXND1Q9Y4D7 1925 aa14.98□□□□□ -0.01
RAB40B-206ENST00000571995 E9PI62 339 aa14.98□□□□□ -0.01
RAB40B-206ENST00000571995 STAT5AP42229 794 aa14.98□□□□□ -0.01
RAB40B-206ENST00000571995 RHAGQ02094 409 aa14.98□□□□□ -0.01
RAB40B-206ENST00000571995 RAB40BQ12829 278 aa14.98□□□□□ -0.01
RAB40B-206ENST00000571995 KIAA0895LQ68EN5 471 aa14.98□□□□□ -0.01
RAB40B-206ENST00000571995 TMEM184AQ6ZMB5 413 aa14.98□□□□□ -0.01
RAB40B-206ENST00000571995 MBOAT2Q6ZWT7 520 aa14.98□□□□□ -0.01
RAB40B-206ENST00000571995 SGTBQ96EQ0 304 aa14.98□□□□□ -0.01
RAB40B-206ENST00000571995 FRMD6Q96NE9 622 aa14.98□□□□□ -0.01
RAB40B-206ENST00000571995 KCNN2Q9H2S1 579 aa14.98□□□□□ -0.01
RAB40B-206ENST00000571995 PCDHGA3Q9Y5H0 932 aa14.98□□□□□ -0.01
RAB40B-206ENST00000571995 GPR89AB7ZAQ6 455 aa14.98□□□□□ -0.01
RAB40B-206ENST00000571995 ZNF670-ZNF695F2Z2N8 137 aa14.98□□□□□ -0.01
RAB40B-206ENST00000571995 GPR89BP0CG08 455 aa14.98□□□□□ -0.01
RAB40B-206ENST00000571995 GSTT2P0CG29 244 aa14.98□□□□□ -0.01
RAB40B-206ENST00000571995 GSTT2BP0CG30 244 aa14.98□□□□□ -0.01
RAB40B-206ENST00000571995 GNALP38405 381 aa14.98□□□□□ -0.01
RAB40B-206ENST00000571995 SRP9P49458 86 aaKnown RBP14.98□□□□□ -0.01
RAB40B-206ENST00000571995 FCRL6Q6DN72 434 aa14.98□□□□□ -0.01
RAB40B-206ENST00000571995 C1orf94Q6P1W5 598 aa14.98□□□□□ -0.01
RAB40B-206ENST00000571995 Q96M85 177 aa14.98□□□□□ -0.01
RAB40B-206ENST00000571995 PIGUQ9H490 435 aa14.98□□□□□ -0.01
RAB40B-206ENST00000571995 TAS2R7Q9NYW3 318 aa14.98□□□□□ -0.01
RAB40B-206ENST00000571995 KLRF1Q9NZS2 232 aa14.98□□□□□ -0.01
RAB40B-206ENST00000571995 GRHPRQ9UBQ7 328 aa14.98□□□□□ -0.01
RAB40B-206ENST00000571995 DTX4Q9Y2E6 619 aa14.98□□□□□ -0.01
RAB40B-206ENST00000571995 RPH3AQ9Y2J0 694 aaPredicted RBP14.98□□□□□ -0.01
RAB40B-206ENST00000571995 SERTM1A2A2V5 107 aa14.97□□□□□ -0.01
RAB40B-206ENST00000571995 CDHR4A6H8M9 788 aa14.97□□□□□ -0.01
RAB40B-206ENST00000571995 OR5K3A6NET4 321 aa14.97□□□□□ -0.01
RAB40B-206ENST00000571995 IDSB3KWA1 339 aa14.97□□□□□ -0.01
RAB40B-206ENST00000571995 GBX2P52951 348 aaPredicted RBP14.97□□□□□ -0.01
RAB40B-206ENST00000571995 ZNF544Q6NX49 715 aa14.97□□□□□ -0.01
RAB40B-206ENST00000571995 ZNF620Q6ZNG0 422 aa14.97□□□□□ -0.01
RAB40B-206ENST00000571995 C1orf216Q8TAB5 229 aa14.97□□□□□ -0.01
RAB40B-206ENST00000571995 ULBP3Q9BZM4 244 aa14.97□□□□□ -0.01
RAB40B-206ENST00000571995 FBXO8Q9NRD0 319 aa14.97□□□□□ -0.01
RAB40B-206ENST00000571995 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.97□□□□□ -0.01
RAB40B-206ENST00000571995 MMP17Q9ULZ9 603 aa14.97□□□□□ -0.01
RAB40B-206ENST00000571995 HMGA2P52926 109 aa14.97□□□□□ -0.01
RAB40B-206ENST00000571995 RACK1P63244 317 aaKnown RBP14.97□□□□□ -0.01
RAB40B-206ENST00000571995 HTR4Q13639 388 aa14.97□□□□□ -0.01
RAB40B-206ENST00000571995 RASSF6Q6ZTQ3 369 aa14.97□□□□□ -0.01
RAB40B-206ENST00000571995 PRSS45Q7RTY3 260 aa14.97□□□□□ -0.01
RAB40B-206ENST00000571995 RASGRP3Q8IV61 690 aa14.97□□□□□ -0.01
RAB40B-206ENST00000571995 RDH10Q8IZV5 341 aa14.97□□□□□ -0.01
RAB40B-206ENST00000571995 DIMT1Q9UNQ2 313 aaKnown RBP14.97□□□□□ -0.01
RAB40B-206ENST00000571995 SLC22A7Q9Y694 548 aa14.97□□□□□ -0.01
RAB40B-206ENST00000571995 TEX13CA0A0J9YWL9 993 aa14.97□□□□□ -0.01
RAB40B-206ENST00000571995 C4orf47A7E2U8 309 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms