RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 SF3A3Q12874 501 aaKnown RBP eCLIP13.01□□□□□ -0.33
LITAF-208ENST00000571627 SELENBP1Q13228 472 aa13.01□□□□□ -0.33
LITAF-208ENST00000571627 ZNF239Q16600 458 aaKnown RBP13.01□□□□□ -0.33
LITAF-208ENST00000571627 PDSS1Q5T2R2 415 aa13.01□□□□□ -0.33
LITAF-208ENST00000571627 PRAMEF8Q5VWM4 474 aa13.01□□□□□ -0.33
LITAF-208ENST00000571627 PRAMEF7Q5VXH5 474 aa13.01□□□□□ -0.33
LITAF-208ENST00000571627 DLEU7Q6UYE1 221 aa13.01□□□□□ -0.33
LITAF-208ENST00000571627 DHDDSQ86SQ9 333 aa13.01□□□□□ -0.33
LITAF-208ENST00000571627 SLC38A5Q8WUX1 472 aa13.01□□□□□ -0.33
LITAF-208ENST00000571627 C10orf82Q8WW14 230 aa13.01□□□□□ -0.33
LITAF-208ENST00000571627 ST8SIA1Q92185 356 aa13.01□□□□□ -0.33
LITAF-208ENST00000571627 GMPPAQ96IJ6 420 aaPredicted RBP13.01□□□□□ -0.33
LITAF-208ENST00000571627 POLDIP3Q9BY77 421 aaKnown RBP13.01□□□□□ -0.33
LITAF-208ENST00000571627 NSRP1Q9H0G5 558 aaKnown RBP13.01□□□□□ -0.33
LITAF-208ENST00000571627 A4GALTQ9NPC4 353 aa13.01□□□□□ -0.33
LITAF-208ENST00000571627 EXOSC3Q9NQT5 275 aaKnown RBP13.01□□□□□ -0.33
LITAF-208ENST00000571627 SAR1AQ9NR31 198 aa13.01□□□□□ -0.33
LITAF-208ENST00000571627 RASSF1Q9NS23 344 aa13.01□□□□□ -0.33
LITAF-208ENST00000571627 PAQR5Q9NXK6 330 aaPredicted RBP13.01□□□□□ -0.33
LITAF-208ENST00000571627 VAPAQ9P0L0 249 aa13.01□□□□□ -0.33
LITAF-208ENST00000571627 PROCRQ9UNN8 238 aa13.01□□□□□ -0.33
LITAF-208ENST00000571627 EMC9Q9Y3B6 208 aa13.01□□□□□ -0.33
LITAF-208ENST00000571627 FREM1Q5H8C1 2179 aa13.01□□□□□ -0.33
LITAF-208ENST00000571627 IGHV3-15A0A0B4J1V0 119 aa13□□□□□ -0.33
LITAF-208ENST00000571627 SH3D21A4FU49 640 aa13□□□□□ -0.33
LITAF-208ENST00000571627 GJE1A6NN92 205 aa13□□□□□ -0.33
LITAF-208ENST00000571627 ENO4A6NNW6 628 aa13□□□□□ -0.33
LITAF-208ENST00000571627 AP3D1O14617 1153 aa13□□□□□ -0.33
LITAF-208ENST00000571627 SS18L1O75177 396 aaPredicted RBP13□□□□□ -0.33
LITAF-208ENST00000571627 CD8BP10966 210 aa13□□□□□ -0.33
LITAF-208ENST00000571627 EPXP11678 715 aa13□□□□□ -0.33
LITAF-208ENST00000571627 NID1P14543 1247 aa13□□□□□ -0.33
LITAF-208ENST00000571627 IL7RP16871 459 aa13□□□□□ -0.33
LITAF-208ENST00000571627 GPX2P18283 190 aa13□□□□□ -0.33
LITAF-208ENST00000571627 RPS4Y1P22090 263 aaKnown RBP13□□□□□ -0.33
LITAF-208ENST00000571627 SLC7A1P30825 629 aa13□□□□□ -0.33
LITAF-208ENST00000571627 CCKARP32238 428 aa13□□□□□ -0.33
LITAF-208ENST00000571627 KCNJ5P48544 419 aa13□□□□□ -0.33
LITAF-208ENST00000571627 CTBP2P56545 445 aa13□□□□□ -0.33
LITAF-208ENST00000571627 KLF10Q13118 480 aa13□□□□□ -0.33
LITAF-208ENST00000571627 NFYCQ13952 458 aa13□□□□□ -0.33
LITAF-208ENST00000571627 ZSWIM7Q19AV6 140 aa13□□□□□ -0.33
LITAF-208ENST00000571627 EXOC3L2Q2M3D2 409 aa13□□□□□ -0.33
LITAF-208ENST00000571627 RUNDC3AQ59EK9 446 aa13□□□□□ -0.33
LITAF-208ENST00000571627 COQ5Q5HYK3 327 aa13□□□□□ -0.33
LITAF-208ENST00000571627 RPS26P11Q5JNZ5 115 aaPredicted RBP13□□□□□ -0.33
LITAF-208ENST00000571627 GCNT6Q5T4J0 391 aa13□□□□□ -0.33
LITAF-208ENST00000571627 C3orf33Q6P1S2 294 aa13□□□□□ -0.33
LITAF-208ENST00000571627 PLEKHM3Q6ZWE6 761 aa13□□□□□ -0.33
LITAF-208ENST00000571627 ZNF563Q8TA94 476 aa13□□□□□ -0.33
LITAF-208ENST00000571627 RNF128Q8TEB7 428 aa13□□□□□ -0.33
LITAF-208ENST00000571627 ABHD3Q8WU67 409 aa13□□□□□ -0.33
LITAF-208ENST00000571627 WDR60Q8WVS4 1066 aa13□□□□□ -0.33
LITAF-208ENST00000571627 TMEM234Q8WY98 164 aa13□□□□□ -0.33
LITAF-208ENST00000571627 DNAJA3Q96EY1 480 aa13□□□□□ -0.33
LITAF-208ENST00000571627 TMEM19Q96HH6 336 aa13□□□□□ -0.33
LITAF-208ENST00000571627 OR5B2Q96R09 309 aa13□□□□□ -0.33
LITAF-208ENST00000571627 CLEC4MQ9H2X3 399 aaPredicted RBP13□□□□□ -0.33
LITAF-208ENST00000571627 LIME1Q9H400 295 aa13□□□□□ -0.33
LITAF-208ENST00000571627 BCL2L10Q9HD36 194 aa13□□□□□ -0.33
LITAF-208ENST00000571627 ACER3Q9NUN7 267 aa13□□□□□ -0.33
LITAF-208ENST00000571627 PRDM4Q9UKN5 801 aa13□□□□□ -0.33
LITAF-208ENST00000571627 ZNF232Q9UNY5 417 aa13□□□□□ -0.33
LITAF-208ENST00000571627 TEP1Q99973 2627 aaKnown RBP13□□□□□ -0.33
LITAF-208ENST00000571627 DSPPQ9NZW4 1301 aa12.99□□□□□ -0.33
LITAF-208ENST00000571627 FAM221AA4D161 298 aa12.99□□□□□ -0.33
LITAF-208ENST00000571627 BBIP1A8MTZ0 92 aa12.99□□□□□ -0.33
LITAF-208ENST00000571627 C5orf58C9J3I9 102 aa12.99□□□□□ -0.33
LITAF-208ENST00000571627 CCDC22O60826 627 aa12.99□□□□□ -0.33
LITAF-208ENST00000571627 NUDT7P0C024 238 aa12.99□□□□□ -0.33
LITAF-208ENST00000571627 KLK2P20151 261 aa12.99□□□□□ -0.33
LITAF-208ENST00000571627 AGTR1P30556 359 aa12.99□□□□□ -0.33
LITAF-208ENST00000571627 CD79BP40259 229 aa12.99□□□□□ -0.33
LITAF-208ENST00000571627 LARS2Q15031 903 aaKnown RBP12.99□□□□□ -0.33
LITAF-208ENST00000571627 DAZAP2Q15038 168 aaPredicted RBP12.99□□□□□ -0.33
LITAF-208ENST00000571627 POU4F3Q15319 338 aa12.99□□□□□ -0.33
LITAF-208ENST00000571627 MMEL1Q495T6 779 aa12.99□□□□□ -0.33
LITAF-208ENST00000571627 LIN52Q52LA3 116 aa12.99□□□□□ -0.33
LITAF-208ENST00000571627 MRPL2Q5T653 305 aaKnown RBP12.99□□□□□ -0.33
LITAF-208ENST00000571627 SPATA21Q7Z572 469 aa12.99□□□□□ -0.33
LITAF-208ENST00000571627 RETREG3Q86VR2 466 aa12.99□□□□□ -0.33
LITAF-208ENST00000571627 OR6K3Q8NGY3 331 aa12.99□□□□□ -0.33
LITAF-208ENST00000571627 BBS10Q8TAM1 723 aa12.99□□□□□ -0.33
LITAF-208ENST00000571627 CPNE4Q96A23 557 aaPredicted RBP12.99□□□□□ -0.33
LITAF-208ENST00000571627 REXO5Q96IC2 774 aaKnown RBP12.99□□□□□ -0.33
LITAF-208ENST00000571627 ANKRD27Q96NW4 1050 aa12.99□□□□□ -0.33
LITAF-208ENST00000571627 CGREF1Q99674 301 aa12.99□□□□□ -0.33
LITAF-208ENST00000571627 CPPED1Q9BRF8 314 aaPredicted RBP12.99□□□□□ -0.33
LITAF-208ENST00000571627 CCDC106Q9BWC9 280 aa12.99□□□□□ -0.33
LITAF-208ENST00000571627 ARMC7Q9H6L4 198 aa12.99□□□□□ -0.33
LITAF-208ENST00000571627 C12orf49Q9H741 205 aa12.99□□□□□ -0.33
LITAF-208ENST00000571627 TIGARQ9NQ88 270 aa12.99□□□□□ -0.33
LITAF-208ENST00000571627 CTPS2Q9NRF8 586 aa12.99□□□□□ -0.33
LITAF-208ENST00000571627 IFT52Q9Y366 437 aa12.99□□□□□ -0.33
LITAF-208ENST00000571627 CAPN7Q9Y6W3 813 aa12.99□□□□□ -0.33
LITAF-208ENST00000571627 MAP1AP78559 2803 aaPredicted RBP12.99□□□□□ -0.33
LITAF-208ENST00000571627 NPPAP01160 153 aa12.98□□□□□ -0.33
LITAF-208ENST00000571627 THBS1P07996 1170 aa12.98□□□□□ -0.33
LITAF-208ENST00000571627 ARAFP10398 606 aa12.98□□□□□ -0.33
LITAF-208ENST00000571627 POU2F1P14859 743 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms