RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 RASSF1Q9NS23 344 aa13.61□□□□□ -0.23
RAB40B-203ENST00000570676 DNAJB12Q9NXW2 375 aaKnown RBP13.61□□□□□ -0.23
RAB40B-203ENST00000570676 MAGEL2Q9UJ55 1249 aa13.61□□□□□ -0.23
RAB40B-203ENST00000570676 MKLN1Q9UL63 735 aa13.61□□□□□ -0.23
RAB40B-203ENST00000570676 POMPQ9Y244 141 aa13.61□□□□□ -0.23
RAB40B-203ENST00000570676 WDR45Q9Y484 360 aa13.61□□□□□ -0.23
RAB40B-203ENST00000570676 TEP1Q99973 2627 aaKnown RBP13.6□□□□□ -0.23
RAB40B-203ENST00000570676 A0A0G2JPF8 293 aa13.6□□□□□ -0.23
RAB40B-203ENST00000570676 OR2M5A3KFT3 312 aa13.6□□□□□ -0.23
RAB40B-203ENST00000570676 A6NNC1 897 aa13.6□□□□□ -0.23
RAB40B-203ENST00000570676 HNRNPCL2B2RXH8 293 aa13.6□□□□□ -0.23
RAB40B-203ENST00000570676 HNRNPCL3B7ZW38 293 aa13.6□□□□□ -0.23
RAB40B-203ENST00000570676 ALG1L2C9J202 215 aa13.6□□□□□ -0.23
RAB40B-203ENST00000570676 OXSR1O95747 527 aaPredicted RBP13.6□□□□□ -0.23
RAB40B-203ENST00000570676 ANGPTL1O95841 491 aa13.6□□□□□ -0.23
RAB40B-203ENST00000570676 NGFRP08138 427 aa13.6□□□□□ -0.23
RAB40B-203ENST00000570676 HNRNPCL4P0DMR1 293 aa13.6□□□□□ -0.23
RAB40B-203ENST00000570676 PEPDP12955 493 aa13.6□□□□□ -0.23
RAB40B-203ENST00000570676 TRAP1Q12931 704 aaKnown RBP13.6□□□□□ -0.23
RAB40B-203ENST00000570676 GPR68Q15743 365 aa13.6□□□□□ -0.23
RAB40B-203ENST00000570676 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.6□□□□□ -0.23
RAB40B-203ENST00000570676 TMEM44Q2T9K0 475 aa13.6□□□□□ -0.23
RAB40B-203ENST00000570676 C1orf146Q5VVC0 180 aa13.6□□□□□ -0.23
RAB40B-203ENST00000570676 TYW3Q6IPR3 259 aaKnown RBP13.6□□□□□ -0.23
RAB40B-203ENST00000570676 FRRS1Q6ZNA5 592 aa13.6□□□□□ -0.23
RAB40B-203ENST00000570676 PATL1Q86TB9 770 aaKnown RBP13.6□□□□□ -0.23
RAB40B-203ENST00000570676 DHFR2Q86XF0 187 aa13.6□□□□□ -0.23
RAB40B-203ENST00000570676 KRT73Q86Y46 540 aa13.6□□□□□ -0.23
RAB40B-203ENST00000570676 GRAMD2AQ8IUY3 354 aa13.6□□□□□ -0.23
RAB40B-203ENST00000570676 UBQLNLQ8IYU4 475 aa13.6□□□□□ -0.23
RAB40B-203ENST00000570676 ZNF619Q8N2I2 560 aa13.6□□□□□ -0.23
RAB40B-203ENST00000570676 OR5M1Q8NGP8 315 aa13.6□□□□□ -0.23
RAB40B-203ENST00000570676 DUSP19Q8WTR2 217 aa13.6□□□□□ -0.23
RAB40B-203ENST00000570676 FAM162AQ96A26 154 aa13.6□□□□□ -0.23
RAB40B-203ENST00000570676 POLDIP3Q9BY77 421 aaKnown RBP13.6□□□□□ -0.23
RAB40B-203ENST00000570676 TBL1XR1Q9BZK7 514 aa13.6□□□□□ -0.23
RAB40B-203ENST00000570676 CLEC4MQ9H2X3 399 aaPredicted RBP13.6□□□□□ -0.23
RAB40B-203ENST00000570676 PTGES2Q9H7Z7 377 aa13.6□□□□□ -0.23
RAB40B-203ENST00000570676 POLE3Q9NRF9 147 aa13.6□□□□□ -0.23
RAB40B-203ENST00000570676 GALNT8Q9NY28 637 aa13.6□□□□□ -0.23
RAB40B-203ENST00000570676 ACTR3BQ9P1U1 418 aa13.6□□□□□ -0.23
RAB40B-203ENST00000570676 ZNF337Q9Y3M9 751 aa13.6□□□□□ -0.23
RAB40B-203ENST00000570676 MED13LQ71F56 2210 aa13.6□□□□□ -0.23
RAB40B-203ENST00000570676 SPG11Q96JI7 2443 aa13.6□□□□□ -0.23
RAB40B-203ENST00000570676 MPDZO75970 2070 aa13.59□□□□□ -0.23
RAB40B-203ENST00000570676 A0A1W2PNV4 684 aa13.59□□□□□ -0.23
RAB40B-203ENST00000570676 H0YC42 278 aa13.59□□□□□ -0.23
RAB40B-203ENST00000570676 ACOT8O14734 319 aa13.59□□□□□ -0.23
RAB40B-203ENST00000570676 KIAA0513O60268 411 aa13.59□□□□□ -0.23
RAB40B-203ENST00000570676 GCM2O75603 506 aaPredicted RBP13.59□□□□□ -0.23
RAB40B-203ENST00000570676 GUSBP08236 651 aa13.59□□□□□ -0.23
RAB40B-203ENST00000570676 KDELR2P33947 212 aa13.59□□□□□ -0.23
RAB40B-203ENST00000570676 CLK3P49761 638 aaKnown RBP13.59□□□□□ -0.23
RAB40B-203ENST00000570676 SUCLG1P53597 346 aaKnown RBP13.59□□□□□ -0.23
RAB40B-203ENST00000570676 TPD52P55327 224 aaPredicted RBP13.59□□□□□ -0.23
RAB40B-203ENST00000570676 PCBP3P57721 371 aaKnown RBP13.59□□□□□ -0.23
RAB40B-203ENST00000570676 FLOT2Q14254 428 aa13.59□□□□□ -0.23
RAB40B-203ENST00000570676 LRRC23Q53EV4 343 aaPredicted RBP13.59□□□□□ -0.23
RAB40B-203ENST00000570676 CYP2R1Q6VVX0 501 aa13.59□□□□□ -0.23
RAB40B-203ENST00000570676 CCDC80Q76M96 950 aa13.59□□□□□ -0.23
RAB40B-203ENST00000570676 KIF18BQ86Y91 864 aa13.59□□□□□ -0.23
RAB40B-203ENST00000570676 MEIOBQ8N635 442 aa13.59□□□□□ -0.23
RAB40B-203ENST00000570676 OR4C3Q8NH37 302 aa13.59□□□□□ -0.23
RAB40B-203ENST00000570676 LRGUKQ96M69 825 aa13.59□□□□□ -0.23
RAB40B-203ENST00000570676 NSMCE2Q96MF7 247 aa13.59□□□□□ -0.23
RAB40B-203ENST00000570676 ZNF607Q96SK3 696 aa13.59□□□□□ -0.23
RAB40B-203ENST00000570676 RBM24Q9BX46 236 aaKnown RBP13.59□□□□□ -0.23
RAB40B-203ENST00000570676 TRIM15Q9C019 465 aa13.59□□□□□ -0.23
RAB40B-203ENST00000570676 SAP130Q9H0E3 1048 aa13.59□□□□□ -0.23
RAB40B-203ENST00000570676 GORASP2Q9H8Y8 452 aa13.59□□□□□ -0.23
RAB40B-203ENST00000570676 MTHFD2LQ9H903 347 aaPredicted RBP13.59□□□□□ -0.23
RAB40B-203ENST00000570676 DSPPQ9NZW4 1301 aa13.59□□□□□ -0.23
RAB40B-203ENST00000570676 TACC2O95359 2948 aa13.59□□□□□ -0.23
RAB40B-203ENST00000570676 PRRC2AP48634 2157 aaKnown RBP13.58□□□□□ -0.24
RAB40B-203ENST00000570676 NPIPA5A0A0B4J1W7 369 aa13.58□□□□□ -0.24
RAB40B-203ENST00000570676 TUBAL3A6NHL2 446 aa13.58□□□□□ -0.24
RAB40B-203ENST00000570676 SLC22A20A6NK97 555 aa13.58□□□□□ -0.24
RAB40B-203ENST00000570676 SHISA8B8ZZ34 492 aa13.58□□□□□ -0.24
RAB40B-203ENST00000570676 NPIPA7E9PJI5 369 aa13.58□□□□□ -0.24
RAB40B-203ENST00000570676 H3BML4 177 aa13.58□□□□□ -0.24
RAB40B-203ENST00000570676 LINC01387J3KSC0 135 aa13.58□□□□□ -0.24
RAB40B-203ENST00000570676 M0QX08 132 aa13.58□□□□□ -0.24
RAB40B-203ENST00000570676 SEC14L5O43304 696 aa13.58□□□□□ -0.24
RAB40B-203ENST00000570676 NPIPA8P0DM63 369 aa13.58□□□□□ -0.24
RAB40B-203ENST00000570676 ETS2P15036 469 aa13.58□□□□□ -0.24
RAB40B-203ENST00000570676 ATP6V1B2P21281 511 aa13.58□□□□□ -0.24
RAB40B-203ENST00000570676 CLDN20P56880 219 aa13.58□□□□□ -0.24
RAB40B-203ENST00000570676 C17orf67Q0P5P2 114 aa13.58□□□□□ -0.24
RAB40B-203ENST00000570676 DAZAP2Q15038 168 aaPredicted RBP13.58□□□□□ -0.24
RAB40B-203ENST00000570676 GLYR1Q49A26 553 aaPredicted RBP13.58□□□□□ -0.24
RAB40B-203ENST00000570676 LCN8Q6JVE9 175 aa13.58□□□□□ -0.24
RAB40B-203ENST00000570676 HMGN2P46Q86SG4 172 aa13.58□□□□□ -0.24
RAB40B-203ENST00000570676 LUZP2Q86TE4 346 aa13.58□□□□□ -0.24
RAB40B-203ENST00000570676 PEX5LQ8IYB4 626 aa13.58□□□□□ -0.24
RAB40B-203ENST00000570676 LINC01560Q8TB33 94 aa13.58□□□□□ -0.24
RAB40B-203ENST00000570676 PMM1Q92871 262 aa13.58□□□□□ -0.24
RAB40B-203ENST00000570676 KLHDC3Q9BQ90 382 aa13.58□□□□□ -0.24
RAB40B-203ENST00000570676 PIGQQ9BRB3 760 aa13.58□□□□□ -0.24
RAB40B-203ENST00000570676 QRSL1Q9H0R6 528 aaKnown RBP13.58□□□□□ -0.24
RAB40B-203ENST00000570676 PIGMQ9H3S5 423 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms