RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 C5orf52A6NGY3 159 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 HAT1O14929 419 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 SCAMP2O15127 329 aaKnown RBP6.49□□□□□ -1.37
CNOT1-222ENST00000570139 TOX3O15405 576 aaPredicted RBP6.49□□□□□ -1.37
CNOT1-222ENST00000570139 SPINT2O43291 252 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 PLPP2O43688 288 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 DUX1O43812 170 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 SCELO95171 688 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 PROS1P07225 676 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 NHLRC4P0CG21 123 aaPredicted RBP6.49□□□□□ -1.37
CNOT1-222ENST00000570139 ZNF883P0CG24 379 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 HOXB6P17509 224 aaKnown RBP6.49□□□□□ -1.37
CNOT1-222ENST00000570139 POLR2CP19387 275 aaPredicted RBP6.49□□□□□ -1.37
CNOT1-222ENST00000570139 PPIBP23284 216 aaKnown RBP6.49□□□□□ -1.37
CNOT1-222ENST00000570139 S100A3P33764 101 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 SSR2P43308 183 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 TRPC1P48995 793 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 PSME3P61289 254 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 KCNJ2P63252 427 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 BNIP2Q12982 314 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 GAGE2BQ13066 116 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 C1orf61Q13536 156 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 PDE7AQ13946 482 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 ZIC1Q15915 447 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 SYT16Q17RD7 645 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 EIF2S3LQ2VIR3 472 aaKnown RBP6.49□□□□□ -1.37
CNOT1-222ENST00000570139 FAM174BQ3ZCQ3 159 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 GAGE2EQ4V326 116 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 LCN10Q6JVE6 187 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 GAGE2AQ6NT46 116 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 C8orf82Q6P1X6 216 aaPredicted RBP6.49□□□□□ -1.37
CNOT1-222ENST00000570139 KCTD18Q6PI47 426 aaPredicted RBP6.49□□□□□ -1.37
CNOT1-222ENST00000570139 FIGLAQ6QHK4 219 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 ABHD13Q7L211 337 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 DHDDSQ86SQ9 333 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 ASPGQ86U10 573 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 KMT5CQ86Y97 462 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 RIMKLAQ8IXN7 391 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 FBXW8Q8N3Y1 598 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 ZCCHC7Q8N3Z6 543 aaKnown RBP6.49□□□□□ -1.37
CNOT1-222ENST00000570139 C2orf73Q8N5S3 287 aaPredicted RBP6.49□□□□□ -1.37
CNOT1-222ENST00000570139 C7orf57Q8NEG2 295 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 OR2L5Q8NG80 312 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 OR8J3Q8NGG0 315 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 OR9I1Q8NGQ6 314 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 OR4C6Q8NH72 309 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 OR10G6Q8NH81 332 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 FLVCR1-AS1Q8TAF5 88 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 ITCHQ96J02 903 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 THTPAQ9BU02 230 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 FAIM2Q9BWQ8 316 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 SPNS1Q9H2V7 528 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 ACTL8Q9H568 366 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 DDX31Q9H8H2 851 aaKnown RBP6.49□□□□□ -1.37
CNOT1-222ENST00000570139 MMP25Q9NPA2 562 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 SLC52A3Q9NQ40 469 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 LYARQ9NX58 379 aaKnown RBP6.49□□□□□ -1.37
CNOT1-222ENST00000570139 MS4A12Q9NXJ0 267 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 ABCD2Q9UBJ2 740 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 GAGE2DQ9UEU5 116 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 ATP6V1HQ9UI12 483 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 DLGAP4Q9Y2H0 992 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 GRIP1Q9Y3R0 1128 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 L3MBTL1Q9Y468 752 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 SLCO1B1Q9Y6L6 691 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 TMEM131Q92545 1883 aa6.48□□□□□ -1.37
CNOT1-222ENST00000570139 A0A096LPI6 279 aa6.48□□□□□ -1.37
CNOT1-222ENST00000570139 LRIT2A6NDA9 550 aa6.48□□□□□ -1.37
CNOT1-222ENST00000570139 ANKUB1A6NFN9 424 aa6.48□□□□□ -1.37
CNOT1-222ENST00000570139 FBP2O00757 339 aa6.48□□□□□ -1.37
CNOT1-222ENST00000570139 PLPP1O14494 284 aa6.48□□□□□ -1.37
CNOT1-222ENST00000570139 SRPX2O60687 465 aaPredicted RBP6.48□□□□□ -1.37
CNOT1-222ENST00000570139 EPN2O95208 641 aa6.48□□□□□ -1.37
CNOT1-222ENST00000570139 ETHE1O95571 254 aa6.48□□□□□ -1.37
CNOT1-222ENST00000570139 SP9P0CG40 484 aa6.48□□□□□ -1.37
CNOT1-222ENST00000570139 MAGP20916 626 aa6.48□□□□□ -1.37
CNOT1-222ENST00000570139 CDH3P22223 829 aa6.48□□□□□ -1.37
CNOT1-222ENST00000570139 ME2P23368 584 aa6.48□□□□□ -1.37
CNOT1-222ENST00000570139 GABRA5P31644 462 aa6.48□□□□□ -1.37
CNOT1-222ENST00000570139 WNT5AP41221 380 aa6.48□□□□□ -1.37
CNOT1-222ENST00000570139 ZFP36L2P47974 494 aaKnown RBP6.48□□□□□ -1.37
CNOT1-222ENST00000570139 DUSP3P51452 185 aaPredicted RBP6.48□□□□□ -1.37
CNOT1-222ENST00000570139 MAPK12P53778 367 aa6.48□□□□□ -1.37
CNOT1-222ENST00000570139 NME5P56597 212 aa6.48□□□□□ -1.37
CNOT1-222ENST00000570139 ELF3P78545 371 aaPredicted RBP6.48□□□□□ -1.37
CNOT1-222ENST00000570139 KLC1Q07866 573 aa6.48□□□□□ -1.37
CNOT1-222ENST00000570139 TRAP1Q12931 704 aaKnown RBP6.48□□□□□ -1.37
CNOT1-222ENST00000570139 ANGPT1Q15389 498 aa6.48□□□□□ -1.37
CNOT1-222ENST00000570139 DEFB133Q30KQ1 61 aa6.48□□□□□ -1.37
CNOT1-222ENST00000570139 VPS26BQ4G0F5 336 aa6.48□□□□□ -1.37
CNOT1-222ENST00000570139 PIGGQ5H8A4 983 aa6.48□□□□□ -1.37
CNOT1-222ENST00000570139 TCTE1Q5JU00 501 aa6.48□□□□□ -1.37
CNOT1-222ENST00000570139 CCNYL2Q5T2Q4 361 aa6.48□□□□□ -1.37
CNOT1-222ENST00000570139 CPTPQ5TA50 214 aa6.48□□□□□ -1.37
CNOT1-222ENST00000570139 OR4C11Q6IEV9 310 aa6.48□□□□□ -1.37
CNOT1-222ENST00000570139 CYB5D1Q6P9G0 228 aa6.48□□□□□ -1.37
CNOT1-222ENST00000570139 WDR74Q6RFH5 385 aaPredicted RBP6.48□□□□□ -1.37
CNOT1-222ENST00000570139 SHFQ7M4L6 423 aa6.48□□□□□ -1.37
CNOT1-222ENST00000570139 SAMD14Q8IZD0 417 aaPredicted RBP6.48□□□□□ -1.37
CNOT1-222ENST00000570139 KIF2BQ8N4N8 673 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms