RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, human

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHDC4-223	ENST00000568499	RPS3A	P61247	264 aa	Known RBP	13.46	□□□□□ -0.25
KLHDC4-223	ENST00000568499	HSF1	Q00613	529 aa		13.46	□□□□□ -0.25
KLHDC4-223	ENST00000568499	ELOA3B	Q3SY89	546 aa		13.46	□□□□□ -0.25
KLHDC4-223	ENST00000568499	FAM98B	Q52LJ0	330 aa	Known RBP	13.46	□□□□□ -0.25
KLHDC4-223	ENST00000568499	ALG10B	Q5I7T1	473 aa		13.46	□□□□□ -0.25
KLHDC4-223	ENST00000568499	ENTPD8	Q5MY95	495 aa		13.46	□□□□□ -0.25
KLHDC4-223	ENST00000568499	SWT1	Q5T5J6	900 aa	Known RBP	13.46	□□□□□ -0.25
KLHDC4-223	ENST00000568499	C1orf146	Q5VVC0	180 aa		13.46	□□□□□ -0.25
KLHDC4-223	ENST00000568499	COMTD1	Q86VU5	262 aa		13.46	□□□□□ -0.25
KLHDC4-223	ENST00000568499	SPATA24	Q86W54	205 aa		13.46	□□□□□ -0.25
KLHDC4-223	ENST00000568499	LILRA2	Q8N149	483 aa		13.46	□□□□□ -0.25
KLHDC4-223	ENST00000568499	ELOA3	Q8NG57	546 aa		13.46	□□□□□ -0.25
KLHDC4-223	ENST00000568499	POC1B	Q8TC44	478 aa		13.46	□□□□□ -0.25
KLHDC4-223	ENST00000568499	SMPDL3B	Q92485	455 aa		13.46	□□□□□ -0.25
KLHDC4-223	ENST00000568499	DDIT4L	Q96D03	193 aa		13.46	□□□□□ -0.25
KLHDC4-223	ENST00000568499	TIMP4	Q99727	224 aa		13.46	□□□□□ -0.25
KLHDC4-223	ENST00000568499	ADAM19	Q9H013	955 aa		13.46	□□□□□ -0.25
KLHDC4-223	ENST00000568499	TIGAR	Q9NQ88	270 aa		13.46	□□□□□ -0.25
KLHDC4-223	ENST00000568499	CTPS2	Q9NRF8	586 aa		13.46	□□□□□ -0.25
KLHDC4-223	ENST00000568499	PAQR5	Q9NXK6	330 aa	Predicted RBP	13.46	□□□□□ -0.25
KLHDC4-223	ENST00000568499	SPRR3	Q9UBC9	169 aa		13.46	□□□□□ -0.25
KLHDC4-223	ENST00000568499	CHRNA9	Q9UGM1	479 aa		13.46	□□□□□ -0.25
KLHDC4-223	ENST00000568499	RALY	Q9UKM9	306 aa	Known RBP	13.46	□□□□□ -0.25
KLHDC4-223	ENST00000568499	TMED7	Q9Y3B3	224 aa		13.46	□□□□□ -0.25
KLHDC4-223	ENST00000568499		V9GYQ6	96 aa		13.46	□□□□□ -0.25
KLHDC4-223	ENST00000568499		A0A1B0GWA3	101 aa		13.45	□□□□□ -0.26
KLHDC4-223	ENST00000568499	TRAPPC13	A5PLN9	417 aa		13.45	□□□□□ -0.26
KLHDC4-223	ENST00000568499	FIGNL2	A6NMB9	653 aa		13.45	□□□□□ -0.26
KLHDC4-223	ENST00000568499	CPSF4L	A6NMK7	179 aa	Known RBP	13.45	□□□□□ -0.26
KLHDC4-223	ENST00000568499	AHRR	A9YTQ3	701 aa		13.45	□□□□□ -0.26
KLHDC4-223	ENST00000568499		H0Y3Z8	333 aa		13.45	□□□□□ -0.26
KLHDC4-223	ENST00000568499	ZNF208	O43345	1280 aa		13.45	□□□□□ -0.26
KLHDC4-223	ENST00000568499	SLC19A2	O60779	497 aa		13.45	□□□□□ -0.26
KLHDC4-223	ENST00000568499	HOXD4	P09016	255 aa	Predicted RBP	13.45	□□□□□ -0.26
KLHDC4-223	ENST00000568499	TFPI	P10646	304 aa		13.45	□□□□□ -0.26
KLHDC4-223	ENST00000568499	THRB	P10828	461 aa		13.45	□□□□□ -0.26
KLHDC4-223	ENST00000568499	GABRA1	P14867	456 aa		13.45	□□□□□ -0.26
KLHDC4-223	ENST00000568499	CPN1	P15169	458 aa		13.45	□□□□□ -0.26
KLHDC4-223	ENST00000568499	TNFRSF1B	P20333	461 aa		13.45	□□□□□ -0.26
KLHDC4-223	ENST00000568499	ATP6V1B2	P21281	511 aa		13.45	□□□□□ -0.26
KLHDC4-223	ENST00000568499	PSMA4	P25789	261 aa	Known RBP	13.45	□□□□□ -0.26
KLHDC4-223	ENST00000568499	PTGER4	P35408	488 aa		13.45	□□□□□ -0.26
KLHDC4-223	ENST00000568499	CHRNB3	Q05901	458 aa		13.45	□□□□□ -0.26
KLHDC4-223	ENST00000568499	CRYZ	Q08257	329 aa	Known RBP	13.45	□□□□□ -0.26
KLHDC4-223	ENST00000568499	C10orf67	Q8IYJ2	551 aa		13.45	□□□□□ -0.26
KLHDC4-223	ENST00000568499	ATP6V1C2	Q8NEY4	427 aa		13.45	□□□□□ -0.26
KLHDC4-223	ENST00000568499	FAM57A	Q8TBR7	257 aa		13.45	□□□□□ -0.26
KLHDC4-223	ENST00000568499	ADAMTS16	Q8TE57	1224 aa		13.45	□□□□□ -0.26
KLHDC4-223	ENST00000568499	KLHDC3	Q9BQ90	382 aa		13.45	□□□□□ -0.26
KLHDC4-223	ENST00000568499	RSPO3	Q9BXY4	272 aa	Predicted RBP	13.45	□□□□□ -0.26
KLHDC4-223	ENST00000568499	MAGIX	Q9H6Y5	334 aa		13.45	□□□□□ -0.26
KLHDC4-223	ENST00000568499	YY1AP1	Q9H869	796 aa		13.45	□□□□□ -0.26
KLHDC4-223	ENST00000568499	ALKBH4	Q9NXW9	302 aa		13.45	□□□□□ -0.26
KLHDC4-223	ENST00000568499	OSGIN1	Q9UJX0	560 aa		13.45	□□□□□ -0.26
KLHDC4-223	ENST00000568499		A0A0B4J2E0	115 aa		13.44	□□□□□ -0.26
KLHDC4-223	ENST00000568499		A0A1B0GX12	115 aa		13.44	□□□□□ -0.26
KLHDC4-223	ENST00000568499	TMEM229A	B2RXF0	380 aa		13.44	□□□□□ -0.26
KLHDC4-223	ENST00000568499	SEC14L5	O43304	696 aa		13.44	□□□□□ -0.26
KLHDC4-223	ENST00000568499	WDR1	O75083	606 aa		13.44	□□□□□ -0.26
KLHDC4-223	ENST00000568499	OR5F1	O95221	314 aa		13.44	□□□□□ -0.26
KLHDC4-223	ENST00000568499	FABP3	P05413	133 aa		13.44	□□□□□ -0.26
KLHDC4-223	ENST00000568499	ZNF708	P17019	499 aa		13.44	□□□□□ -0.26
KLHDC4-223	ENST00000568499	HTR2A	P28223	471 aa		13.44	□□□□□ -0.26
KLHDC4-223	ENST00000568499	STAR	P49675	285 aa		13.44	□□□□□ -0.26
KLHDC4-223	ENST00000568499	LHX2	P50458	406 aa		13.44	□□□□□ -0.26
KLHDC4-223	ENST00000568499	FOXK1	P85037	733 aa		13.44	□□□□□ -0.26
KLHDC4-223	ENST00000568499	SRY	Q05066	204 aa		13.44	□□□□□ -0.26
KLHDC4-223	ENST00000568499	ST3GAL3	Q11203	375 aa		13.44	□□□□□ -0.26
KLHDC4-223	ENST00000568499	NPTX1	Q15818	432 aa		13.44	□□□□□ -0.26
KLHDC4-223	ENST00000568499	GXYLT1	Q4G148	440 aa		13.44	□□□□□ -0.26
KLHDC4-223	ENST00000568499	C5orf46	Q6UWT4	87 aa		13.44	□□□□□ -0.26
KLHDC4-223	ENST00000568499	ESPNL	Q6ZVH7	1005 aa		13.44	□□□□□ -0.26
KLHDC4-223	ENST00000568499	ADGRG3	Q86Y34	549 aa		13.44	□□□□□ -0.26
KLHDC4-223	ENST00000568499	RBM45	Q8IUH3	476 aa	Known RBP	13.44	□□□□□ -0.26
KLHDC4-223	ENST00000568499	LACC1	Q8IV20	430 aa		13.44	□□□□□ -0.26
KLHDC4-223	ENST00000568499	UBQLNL	Q8IYU4	475 aa		13.44	□□□□□ -0.26
KLHDC4-223	ENST00000568499	OR4D11	Q8NGI4	311 aa		13.44	□□□□□ -0.26
KLHDC4-223	ENST00000568499	C3orf49	Q96BT1	292 aa		13.44	□□□□□ -0.26
KLHDC4-223	ENST00000568499	RSRC1	Q96IZ7	334 aa	Known RBP	13.44	□□□□□ -0.26
KLHDC4-223	ENST00000568499	MPP4	Q96JB8	637 aa		13.44	□□□□□ -0.26
KLHDC4-223	ENST00000568499	PRRC1	Q96M27	445 aa		13.44	□□□□□ -0.26
KLHDC4-223	ENST00000568499	KLHL15	Q96M94	604 aa		13.44	□□□□□ -0.26
KLHDC4-223	ENST00000568499	ZNF347	Q96SE7	839 aa		13.44	□□□□□ -0.26
KLHDC4-223	ENST00000568499	SEPHS2	Q99611	448 aa		13.44	□□□□□ -0.26
KLHDC4-223	ENST00000568499	FNDC11	Q9BVV2	318 aa		13.44	□□□□□ -0.26
KLHDC4-223	ENST00000568499	PRR14	Q9BWN1	585 aa		13.44	□□□□□ -0.26
KLHDC4-223	ENST00000568499	AMBRA1	Q9C0C7	1298 aa		13.44	□□□□□ -0.26
KLHDC4-223	ENST00000568499	PRDM14	Q9GZV8	571 aa		13.44	□□□□□ -0.26
KLHDC4-223	ENST00000568499	TMEM185B	Q9H7F4	350 aa		13.44	□□□□□ -0.26
KLHDC4-223	ENST00000568499	ENPP4	Q9Y6X5	453 aa		13.44	□□□□□ -0.26
KLHDC4-223	ENST00000568499		A8MVM7	634 aa		13.43	□□□□□ -0.26
KLHDC4-223	ENST00000568499	EIF1AY	O14602	144 aa	Known RBP	13.43	□□□□□ -0.26
KLHDC4-223	ENST00000568499	CHP2	O43745	196 aa		13.43	□□□□□ -0.26
KLHDC4-223	ENST00000568499	TPST2	O60704	377 aa		13.43	□□□□□ -0.26
KLHDC4-223	ENST00000568499	WISP2	O76076	250 aa		13.43	□□□□□ -0.26
KLHDC4-223	ENST00000568499	GPI	P06744	558 aa		13.43	□□□□□ -0.26
KLHDC4-223	ENST00000568499	RHCE	P18577	417 aa		13.43	□□□□□ -0.26
KLHDC4-223	ENST00000568499	CCNA2	P20248	432 aa		13.43	□□□□□ -0.26
KLHDC4-223	ENST00000568499	SFTPD	P35247	375 aa		13.43	□□□□□ -0.26
KLHDC4-223	ENST00000568499	CDH12	P55289	794 aa		13.43	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 77 ms