RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 AURKBQ96GD4 344 aaPredicted RBP7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 ZNF559Q9BR84 538 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 SRXN1Q9BYN0 137 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 MED4Q9NPJ6 270 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 RASSF1Q9NS23 344 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 MRGBPQ9NV56 204 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 MCTS1Q9ULC4 181 aaKnown RBP7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 TRIM33Q9UPN9 1127 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 TRAPPC4Q9Y296 219 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 IFT52Q9Y366 437 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 POLQO75417 2590 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 CADP27708 2225 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 IGKV3D-15A0A087WSY6 115 aa7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 TUBAL3A6NHL2 446 aa7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 A6NNC1 897 aa7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 ZNF724A8MTY0 619 aa7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 CYTIPO60759 359 aa7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 PGM3O95394 542 aa7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 SYNGR4O95473 234 aa7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 ANP32DO95626 131 aa7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 PMS2P2O95744 297 aa7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 NUDT14O95848 222 aa7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 OPN1LWP04000 364 aa7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 NUDT7P0C024 238 aa7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 IL7RP16871 459 aa7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 AGTR1P30556 359 aa7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 ADSLP30566 484 aaPredicted RBP7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 UGT2B10P36537 528 aa7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 SLC1A3P43003 542 aa7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 CRATP43155 626 aa7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 RNF144AP50876 292 aaPredicted RBP7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 HPCAP84074 193 aa7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 FAM27E3Q08E93 113 aa7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 AGKQ53H12 422 aa7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 SYT14P1Q58G82 188 aa7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 C6orf10Q5SRN2 563 aa7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 MRPL2Q5T653 305 aaKnown RBP7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 MTDHQ86UE4 582 aaKnown RBP7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 RETREG3Q86VR2 466 aa7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 C10orf111Q8N326 155 aa7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 CLIP4Q8N3C7 705 aa7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 ZNF614Q8N883 585 aa7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 OR52P1PQ8NH57 321 aa7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 PNPT1Q8TCS8 783 aaKnown RBP7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 WDR60Q8WVS4 1066 aa7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 SMPDL3BQ92485 455 aa7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 TMEM19Q96HH6 336 aa7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 ZNF317Q96PQ6 595 aaPredicted RBP7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 CPPED1Q9BRF8 314 aaPredicted RBP7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 SLC39A3Q9BRY0 314 aa7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 TACO1Q9BSH4 297 aaKnown RBP7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 SPATA9Q9BWV2 254 aa7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 IKZF5Q9H5V7 419 aa7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 SERINC1Q9NRX5 453 aa7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 KLHL13Q9P2N7 655 aa7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 CHRNA9Q9UGM1 479 aa7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 LEF1Q9UJU2 399 aaPredicted RBP7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 HDGFL3Q9Y3E1 203 aa7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 TESMINQ9Y4I5 508 aa7.3□□□□□ -1.24
HDGFL3-205ENST00000568129 ZNF469Q96JG9 3925 aaPredicted RBP7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 A0A1W2PNR3 127 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 CFAP73A6NFT4 308 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 EEF1E1-BLOC1S5C9J1V9 151 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 C16orf97H3BN30 126 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 AP3D1O14617 1153 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 SMAD9O15198 467 aaKnown RBP7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 EEF1E1O43324 174 aaKnown RBP7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 NPIPB7O75200 414 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 PRKD3O94806 890 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 CNOT4O95628 575 aaKnown RBP7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 NPPAP01160 153 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 BCHEP06276 602 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 YES1P07947 543 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 PSMB1P20618 241 aaKnown RBP7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 ENPP1P22413 925 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 LOXP28300 417 aaPredicted RBP7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 CCKARP32238 428 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 SFTPDP35247 375 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 IDH2P48735 452 aaKnown RBP7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 DIO1P49895 249 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 GZMMP51124 257 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 POLR2HP52434 150 aaKnown RBP7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 SLC16A1P53985 500 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 PCBP3P57721 371 aaKnown RBP7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 CSNK2A1P68400 391 aaPredicted RBP7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 MERTKQ12866 999 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 SNTB1Q13884 538 aaKnown RBP7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 LIN52Q52LA3 116 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 COQ5Q5HYK3 327 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 ABLIM2Q6H8Q1 611 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 REEP3Q6NUK4 255 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 DHRS4L2Q6PKH6 230 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 DNAJC14Q6Y2X3 702 aaPredicted RBP7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 STAC2Q6ZMT1 411 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 ZNF836Q6ZNA1 936 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 BEND4Q6ZU67 534 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 FCRLAQ7L513 359 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 ZNF550Q7Z398 422 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 NET1Q7Z628 596 aaPredicted RBP7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 LUZP2Q86TE4 346 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms