RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 RUNX1T1Q06455 604 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 PPP1R8Q12972 351 aaKnown RBP4.89□□□□□ -1.63
CAPN3-217ENST00000567817 MLLT11Q13015 90 aaPredicted RBP4.89□□□□□ -1.63
CAPN3-217ENST00000567817 ATP1A4Q13733 1029 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 PTGES3Q15185 160 aaKnown RBP4.89□□□□□ -1.63
CAPN3-217ENST00000567817 EXOC3L2Q2M3D2 409 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 CCSMST1Q4G0I0 132 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 SPANXN2Q5MJ10 180 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 WDR45BQ5MNZ6 344 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 EOGTQ5NDL2 527 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 SLX4IPQ5VYV7 408 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 PLAG1Q6DJT9 500 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 ZNF770Q6IQ21 691 aaPredicted RBP4.89□□□□□ -1.63
CAPN3-217ENST00000567817 KIAA1161Q6NSJ0 714 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 DUS1LQ6P1R4 473 aaKnown RBP4.89□□□□□ -1.63
CAPN3-217ENST00000567817 FAM83HQ6ZRV2 1179 aaPredicted RBP4.89□□□□□ -1.63
CAPN3-217ENST00000567817 PTCHD4Q6ZW05 846 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 Q6ZWC4 215 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 C11orf96Q7Z7L8 435 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 CCDC71Q8IV32 467 aaPredicted RBP4.89□□□□□ -1.63
CAPN3-217ENST00000567817 ZNF547Q8IVP9 402 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 ZBTB8BQ8NAP8 495 aaPredicted RBP4.89□□□□□ -1.63
CAPN3-217ENST00000567817 PROKR2Q8NFJ6 384 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 SUN3Q8TAQ9 357 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 NDNFQ8TB73 568 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 SETD6Q8TBK2 473 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 UTP15Q8TED0 518 aaKnown RBP4.89□□□□□ -1.63
CAPN3-217ENST00000567817 SLC38A5Q8WUX1 472 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 SNRNP27Q8WVK2 155 aaKnown RBP4.89□□□□□ -1.63
CAPN3-217ENST00000567817 XAGE5Q8WWM1 108 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 PIK3R3Q92569 461 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 AP3S1Q92572 193 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 DPF1Q92782 380 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 GGHQ92820 318 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 FGF11Q92914 225 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 ARRDC3Q96B67 414 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 TM4SF18Q96CE8 201 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 TMEM80Q96HE8 168 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 ZFYVE19Q96K21 471 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 TRNT1Q96Q11 434 aaKnown RBP4.89□□□□□ -1.63
CAPN3-217ENST00000567817 BARD1Q99728 777 aaKnown RBP4.89□□□□□ -1.63
CAPN3-217ENST00000567817 COQ7Q99807 217 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 MND1Q9BWT6 205 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 UCK2Q9BZX2 261 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 POLR2J2Q9GZM3 115 aaKnown RBP4.89□□□□□ -1.63
CAPN3-217ENST00000567817 ROGDIQ9GZN7 287 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 POLR2J3Q9H1A7 115 aaKnown RBP4.89□□□□□ -1.63
CAPN3-217ENST00000567817 LINC00597Q9H2U6 94 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 TMEM245Q9H330 911 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 OR51B5Q9H339 312 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 WDR26Q9H7D7 661 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 MVB12BQ9H7P6 319 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 EVA1AQ9H8M9 152 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 CACYBPQ9HB71 228 aaKnown RBP4.89□□□□□ -1.63
CAPN3-217ENST00000567817 FZD3Q9NPG1 666 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 PHPT1Q9NRX4 125 aaPredicted RBP4.89□□□□□ -1.63
CAPN3-217ENST00000567817 SACM1LQ9NTJ5 587 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 NPAP1Q9NZP6 1156 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 CPNE7Q9UBL6 633 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 SEC14L3Q9UDX4 400 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 TAC3Q9UHF0 121 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 SLC13A4Q9UKG4 626 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 ERVK-11Q9UQG0 969 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 LIPT1Q9Y234 373 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 ITM2BQ9Y287 266 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 PCDHGA1Q9Y5H4 931 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 HEMK1Q9Y5R4 338 aaPredicted RBP4.89□□□□□ -1.63
CAPN3-217ENST00000567817 HEBP2Q9Y5Z4 205 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 CREBBPQ92793 2442 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 KNTC1P50748 2209 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 ANAPC1Q9H1A4 1944 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 A0A0G2JPF8 293 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 DUXAA6NLW8 204 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 PDZK1P1A8MUH7 402 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 HNRNPCL2B2RXH8 293 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 HNRNPCL3B7ZW38 293 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 TMX2-CTNND1H3BSU7 103 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 PYCARD-AS1I3L0S3 204 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 TLR4O00206 839 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 PLPP1O14494 284 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 NDUFS4O43181 175 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 OR10H3O60404 316 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 GCM2O75603 506 aaPredicted RBP4.88□□□□□ -1.63
CAPN3-217ENST00000567817 LCKP06239 509 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 IFI6P09912 130 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 HNRNPCL4P0DMR1 293 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 ZNF10P21506 573 aaPredicted RBP4.88□□□□□ -1.63
CAPN3-217ENST00000567817 ALDH4A1P30038 563 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 C21orf33P30042 268 aaPredicted RBP4.88□□□□□ -1.63
CAPN3-217ENST00000567817 BSGP35613 385 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 GRK6P43250 576 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 SLC15A1P46059 708 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 CCT3P49368 545 aaKnown RBP4.88□□□□□ -1.63
CAPN3-217ENST00000567817 XKP51811 444 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 SMSP52788 366 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 RPS3AP61247 264 aaKnown RBP4.88□□□□□ -1.63
CAPN3-217ENST00000567817 VBP1P61758 197 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 STXBP1P61764 594 aaKnown RBP4.88□□□□□ -1.63
CAPN3-217ENST00000567817 NCS1P62166 190 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 RPS21P63220 83 aaKnown RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms