RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 BCL2A1Q16548 175 aa12.15□□□□□ -0.46
CLK3-218ENST00000566926 ACSF3Q4G176 576 aaPredicted RBP12.15□□□□□ -0.46
CLK3-218ENST00000566926 IFI44LQ53G44 452 aa12.15□□□□□ -0.46
CLK3-218ENST00000566926 CCNJQ5T5M9 372 aa12.15□□□□□ -0.46
CLK3-218ENST00000566926 NSUN5P2Q63ZY6 315 aa12.15□□□□□ -0.46
CLK3-218ENST00000566926 CHMP1BQ7LBR1 199 aa12.15□□□□□ -0.46
CLK3-218ENST00000566926 PIWIL3Q7Z3Z3 882 aaKnown RBP12.15□□□□□ -0.46
CLK3-218ENST00000566926 PEX5LQ8IYB4 626 aa12.15□□□□□ -0.46
CLK3-218ENST00000566926 ANKFN1Q8N957 763 aa12.15□□□□□ -0.46
CLK3-218ENST00000566926 TAMM41Q96BW9 452 aa12.15□□□□□ -0.46
CLK3-218ENST00000566926 C1GALT1C1Q96EU7 318 aa12.15□□□□□ -0.46
CLK3-218ENST00000566926 OTUB1Q96FW1 271 aaPredicted RBP12.15□□□□□ -0.46
CLK3-218ENST00000566926 CENPNQ96H22 339 aaPredicted RBP12.15□□□□□ -0.46
CLK3-218ENST00000566926 ZNF350Q9GZX5 532 aa12.15□□□□□ -0.46
CLK3-218ENST00000566926 ARMC7Q9H6L4 198 aa12.15□□□□□ -0.46
CLK3-218ENST00000566926 RPH3AQ9Y2J0 694 aaPredicted RBP12.15□□□□□ -0.46
CLK3-218ENST00000566926 WDR45Q9Y484 360 aa12.15□□□□□ -0.46
CLK3-218ENST00000566926 GPC6Q9Y625 555 aaPredicted RBP12.15□□□□□ -0.46
CLK3-218ENST00000566926 UNC79Q9P2D8 2635 aa12.14□□□□□ -0.47
CLK3-218ENST00000566926 A0A087WZY1 265 aa12.14□□□□□ -0.47
CLK3-218ENST00000566926 SYT5O00445 386 aa12.14□□□□□ -0.47
CLK3-218ENST00000566926 GCM2O75603 506 aaPredicted RBP12.14□□□□□ -0.47
CLK3-218ENST00000566926 MFN2O95140 757 aa12.14□□□□□ -0.47
CLK3-218ENST00000566926 THBS1P07996 1170 aa12.14□□□□□ -0.47
CLK3-218ENST00000566926 CHRM4P08173 479 aa12.14□□□□□ -0.47
CLK3-218ENST00000566926 PRKAR1BP31321 381 aa12.14□□□□□ -0.47
CLK3-218ENST00000566926 PTDSS1P48651 473 aaKnown RBP12.14□□□□□ -0.47
CLK3-218ENST00000566926 ATP12AP54707 1039 aa12.14□□□□□ -0.47
CLK3-218ENST00000566926 FUT5Q11128 374 aa12.14□□□□□ -0.47
CLK3-218ENST00000566926 LARS2Q15031 903 aaKnown RBP12.14□□□□□ -0.47
CLK3-218ENST00000566926 MAPK11Q15759 364 aa12.14□□□□□ -0.47
CLK3-218ENST00000566926 SYPL1Q16563 259 aa12.14□□□□□ -0.47
CLK3-218ENST00000566926 SLC25A35Q3KQZ1 300 aa12.14□□□□□ -0.47
CLK3-218ENST00000566926 FLYWCH1Q4VC44 716 aa12.14□□□□□ -0.47
CLK3-218ENST00000566926 RAET1LQ5VY80 246 aa12.14□□□□□ -0.47
CLK3-218ENST00000566926 ZNF787Q6DD87 383 aa12.14□□□□□ -0.47
CLK3-218ENST00000566926 APOOLQ6UXV4 268 aa12.14□□□□□ -0.47
CLK3-218ENST00000566926 GALNT10Q86SR1 603 aa12.14□□□□□ -0.47
CLK3-218ENST00000566926 CCDC71Q8IV32 467 aaPredicted RBP12.14□□□□□ -0.47
CLK3-218ENST00000566926 ZNF619Q8N2I2 560 aa12.14□□□□□ -0.47
CLK3-218ENST00000566926 PROX1Q92786 737 aa12.14□□□□□ -0.47
CLK3-218ENST00000566926 LRRC46Q96FV0 321 aa12.14□□□□□ -0.47
CLK3-218ENST00000566926 HSH2DQ96JZ2 352 aa12.14□□□□□ -0.47
CLK3-218ENST00000566926 TRIB1Q96RU8 372 aa12.14□□□□□ -0.47
CLK3-218ENST00000566926 ZNF347Q96SE7 839 aa12.14□□□□□ -0.47
CLK3-218ENST00000566926 SDF2Q99470 211 aa12.14□□□□□ -0.47
CLK3-218ENST00000566926 SEPHS2Q99611 448 aa12.14□□□□□ -0.47
CLK3-218ENST00000566926 OSBPL10Q9BXB5 764 aa12.14□□□□□ -0.47
CLK3-218ENST00000566926 PINK1Q9BXM7 581 aa12.14□□□□□ -0.47
CLK3-218ENST00000566926 RTN4RQ9BZR6 473 aa12.14□□□□□ -0.47
CLK3-218ENST00000566926 SAP130Q9H0E3 1048 aa12.14□□□□□ -0.47
CLK3-218ENST00000566926 SLC38A1Q9H2H9 487 aa12.14□□□□□ -0.47
CLK3-218ENST00000566926 DNAJB9Q9UBS3 223 aa12.14□□□□□ -0.47
CLK3-218ENST00000566926 NKX1-2Q9UD57 310 aaPredicted RBP12.14□□□□□ -0.47
CLK3-218ENST00000566926 RIMS3Q9UJD0 308 aa12.14□□□□□ -0.47
CLK3-218ENST00000566926 SLC13A4Q9UKG4 626 aa12.14□□□□□ -0.47
CLK3-218ENST00000566926 ZNF232Q9UNY5 417 aa12.14□□□□□ -0.47
CLK3-218ENST00000566926 SLC9A8Q9Y2E8 581 aa12.14□□□□□ -0.47
CLK3-218ENST00000566926 CRYBG3Q68DQ2 2970 aa12.14□□□□□ -0.47
CLK3-218ENST00000566926 KIAA1549Q9HCM3 1950 aa12.13□□□□□ -0.47
CLK3-218ENST00000566926 A0A0G2JNJ9 132 aa12.13□□□□□ -0.47
CLK3-218ENST00000566926 PRAMEF27A3QJZ7 478 aa12.13□□□□□ -0.47
CLK3-218ENST00000566926 GTPBP1O00178 669 aaKnown RBP12.13□□□□□ -0.47
CLK3-218ENST00000566926 DVL2O14641 736 aa12.13□□□□□ -0.47
CLK3-218ENST00000566926 KIAA0513O60268 411 aa12.13□□□□□ -0.47
CLK3-218ENST00000566926 SEMG1P04279 462 aa12.13□□□□□ -0.47
CLK3-218ENST00000566926 FABP3P05413 133 aa12.13□□□□□ -0.47
CLK3-218ENST00000566926 DBIP07108 87 aaKnown RBP12.13□□□□□ -0.47
CLK3-218ENST00000566926 POU3F2P20265 443 aaPredicted RBP12.13□□□□□ -0.47
CLK3-218ENST00000566926 GRNP28799 593 aaKnown RBP12.13□□□□□ -0.47
CLK3-218ENST00000566926 CEACAM8P31997 349 aaPredicted RBP12.13□□□□□ -0.47
CLK3-218ENST00000566926 VHLP40337 213 aa12.13□□□□□ -0.47
CLK3-218ENST00000566926 LHX2P50458 406 aa12.13□□□□□ -0.47
CLK3-218ENST00000566926 ZNF41P51814 821 aaPredicted RBP12.13□□□□□ -0.47
CLK3-218ENST00000566926 CRYBA2P53672 197 aa12.13□□□□□ -0.47
CLK3-218ENST00000566926 SRYQ05066 204 aa12.13□□□□□ -0.47
CLK3-218ENST00000566926 CDSNQ15517 529 aa12.13□□□□□ -0.47
CLK3-218ENST00000566926 TRIP10Q15642 601 aa12.13□□□□□ -0.47
CLK3-218ENST00000566926 DCST1Q5T197 706 aa12.13□□□□□ -0.47
CLK3-218ENST00000566926 ZAR1Q86SH2 424 aa12.13□□□□□ -0.47
CLK3-218ENST00000566926 MEIOBQ8N635 442 aa12.13□□□□□ -0.47
CLK3-218ENST00000566926 B4GALNT2Q8NHY0 566 aa12.13□□□□□ -0.47
CLK3-218ENST00000566926 PHOSPHO1Q8TCT1 267 aa12.13□□□□□ -0.47
CLK3-218ENST00000566926 MARVELD3Q96A59 401 aa12.13□□□□□ -0.47
CLK3-218ENST00000566926 ZBTB8AQ96BR9 441 aa12.13□□□□□ -0.47
CLK3-218ENST00000566926 TPD52L3Q96J77 140 aa12.13□□□□□ -0.47
CLK3-218ENST00000566926 ZFP3Q96NJ6 502 aa12.13□□□□□ -0.47
CLK3-218ENST00000566926 TM9SF2Q99805 663 aa12.13□□□□□ -0.47
CLK3-218ENST00000566926 SLC24A3Q9HC58 644 aa12.13□□□□□ -0.47
CLK3-218ENST00000566926 FBXO34Q9NWN3 711 aa12.13□□□□□ -0.47
CLK3-218ENST00000566926 KLHL28Q9NXS3 571 aa12.13□□□□□ -0.47
CLK3-218ENST00000566926 ZNF629Q9UEG4 869 aaPredicted RBP12.13□□□□□ -0.47
CLK3-218ENST00000566926 Q9UFV3 132 aa12.13□□□□□ -0.47
CLK3-218ENST00000566926 DTNAQ9Y4J8 743 aa12.13□□□□□ -0.47
CLK3-218ENST00000566926 NBPF19A0A087WUL8 3843 aa12.12□□□□□ -0.47
CLK3-218ENST00000566926 OR2M5A3KFT3 312 aa12.12□□□□□ -0.47
CLK3-218ENST00000566926 MBD3L4A6NDZ8 208 aaPredicted RBP12.12□□□□□ -0.47
CLK3-218ENST00000566926 MBD3L3A6NE82 208 aaPredicted RBP12.12□□□□□ -0.47
CLK3-218ENST00000566926 AGAP5A6NIR3 686 aa12.12□□□□□ -0.47
CLK3-218ENST00000566926 MBD3L5A6NJ08 208 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms