RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 ANGPTL6Q8NI99 470 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 CACNG8Q8WXS5 425 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 ZNF486Q96H40 463 aaPredicted RBP2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 LMLNQ96KR4 655 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 CAPNS2Q96L46 248 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 UPF3BQ9BZI7 483 aaKnown RBP2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 LIME1Q9H400 295 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 Q9HAA7 133 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 NMUR1Q9HB89 426 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 ZNF275Q9NSD4 429 aaPredicted RBP2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 SEC14L4Q9UDX3 406 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 PHF11Q9UIL8 331 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 ZNF229Q9UJW7 825 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 NUP50Q9UKX7 468 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 CGNL1Q0VF96 1302 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 RNF17Q9BXT8 1623 aaKnown RBP2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 CFTRP13569 1480 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 SAA2-SAA4A0A096LPE2 208 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 A0A0A6YYD4 124 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 IQANK1A0A1B0GTG1 560 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 A0A1B0GUS0 222 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 PLSCR5A0PG75 271 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 VSTM2BA6NLU5 285 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 SRRM3A6NNA2 597 aaPredicted RBP2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 A8MUA0 341 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 C11orf98E9PRG8 122 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 LATO43561 262 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 PRKAB2O43741 272 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 HUS1O60921 280 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 TRMUO75648 421 aaKnown RBP2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 CDC123O75794 336 aaPredicted RBP2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 OXSR1O95747 527 aaPredicted RBP2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 CT62P0C5K7 136 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 OR9G9P0C7N8 305 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 MYL2P10916 166 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 PRPS2P11908 318 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 ABOP16442 354 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 ZNF12P17014 697 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 POLR2EP19388 210 aaKnown RBP2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 PMCHP20382 165 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 CCKBRP32239 447 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 RORAP35398 523 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 ZFP36L2P47974 494 aaKnown RBP2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 HOXA1P49639 335 aaPredicted RBP2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 PGFP49763 221 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 STK19P49842 368 aaPredicted RBP2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 EMDP50402 254 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 CCNG1P51959 295 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 PLTPP55058 493 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 PKNOX1P55347 436 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 ATP5J2P56134 94 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 MYL6P60660 151 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 RAB10P61026 200 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 RPS6P62753 249 aaKnown RBP2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 LCN2P80188 198 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 GUCY2DQ02846 1103 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 LRRC63Q05C16 580 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 SIGLEC14Q08ET2 396 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 ITPK1Q13572 414 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 P2RY6Q15077 328 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 SLC15A2Q16348 729 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 AANATQ16613 207 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 PPP1R3AQ16821 1122 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 PPM1LQ5SGD2 360 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 GPR107Q5VW38 600 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 C22orf42Q6IC83 251 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 CAPRIN2Q6IMN6 1127 aaKnown RBP2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 ULK3Q6PHR2 472 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 APOOLQ6UXV4 268 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 TRMT10CQ7L0Y3 403 aaKnown RBP2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 PIM3Q86V86 326 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 ERICH1Q86X53 443 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 GPR65Q8IYL9 337 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 SLC22A15Q8IZD6 547 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 ST13P4Q8IZP2 240 aaPredicted RBP2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 MARVELD2Q8N4S9 558 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 KIR3DL3Q8N743 410 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 LRRC75AQ8NAA5 344 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 OR4F6Q8NGB9 312 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 OR52E5Q8NH55 327 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 AENQ8WTP8 325 aaKnown RBP2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 NTN5Q8WTR8 489 aaPredicted RBP2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 SMAP2Q8WU79 429 aaPredicted RBP2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 SECTM1Q8WVN6 248 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 C17orf50Q8WW18 174 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 UBE2E3Q969T4 207 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 DNAJA3Q96EY1 480 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 ST6GAL2Q96JF0 529 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 ART5Q96L15 291 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 GLT1D1Q96MS3 346 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 TNFRSF13CQ96RJ3 184 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 CNN2Q99439 309 aaKnown RBP2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 RNF2Q99496 336 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 NAPGQ99747 312 aaPredicted RBP2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 P2RY13Q9BPV8 354 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 ACBD6Q9BR61 282 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 LRRC1Q9BTT6 524 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 SEMA4CQ9C0C4 833 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 HIPK2Q9H2X6 1198 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 RNF41Q9H4P4 317 aaPredicted RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms