RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 TACO1Q9BSH4 297 aaKnown RBP16.25■□□□□ 0.19
USB1-213ENST00000566292 MARCOQ9UEW3 520 aaPredicted RBP16.25■□□□□ 0.19
USB1-213ENST00000566292 PRSS50Q9UI38 385 aa16.25■□□□□ 0.19
USB1-213ENST00000566292 TRIM64A6NGJ6 449 aa16.24■□□□□ 0.19
USB1-213ENST00000566292 TRIM64BA6NI03 449 aa16.24■□□□□ 0.19
USB1-213ENST00000566292 CLDN24A6NM45 220 aa16.24■□□□□ 0.19
USB1-213ENST00000566292 PAX1P15863 534 aa16.24■□□□□ 0.19
USB1-213ENST00000566292 IL12AP29459 219 aa16.24■□□□□ 0.19
USB1-213ENST00000566292 S100A3P33764 101 aa16.24■□□□□ 0.19
USB1-213ENST00000566292 CHI3L1P36222 383 aaPredicted RBP16.24■□□□□ 0.19
USB1-213ENST00000566292 OR3A2P47893 321 aa16.24■□□□□ 0.19
USB1-213ENST00000566292 DIO1P49895 249 aa16.24■□□□□ 0.19
USB1-213ENST00000566292 KHKP50053 298 aa16.24■□□□□ 0.19
USB1-213ENST00000566292 SYT14P1Q58G82 188 aa16.24■□□□□ 0.19
USB1-213ENST00000566292 SEZ6L2Q6UXD5 910 aa16.24■□□□□ 0.19
USB1-213ENST00000566292 TMPPEQ6ZT21 453 aa16.24■□□□□ 0.19
USB1-213ENST00000566292 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.24■□□□□ 0.19
USB1-213ENST00000566292 ATG4DQ86TL0 474 aaPredicted RBP16.24■□□□□ 0.19
USB1-213ENST00000566292 ZNF619Q8N2I2 560 aa16.24■□□□□ 0.19
USB1-213ENST00000566292 ZNF611Q8N823 705 aa16.24■□□□□ 0.19
USB1-213ENST00000566292 LILRB1Q8NHL6 650 aaPredicted RBP16.24■□□□□ 0.19
USB1-213ENST00000566292 OIT3Q8WWZ8 545 aa16.24■□□□□ 0.19
USB1-213ENST00000566292 AKAP1Q92667 903 aaKnown RBP eCLIP16.24■□□□□ 0.19
USB1-213ENST00000566292 KISS1RQ969F8 398 aaPredicted RBP16.24■□□□□ 0.19
USB1-213ENST00000566292 PAIP2Q9BPZ3 127 aaKnown RBP16.24■□□□□ 0.19
USB1-213ENST00000566292 CCDC106Q9BWC9 280 aa16.24■□□□□ 0.19
USB1-213ENST00000566292 CTPS2Q9NRF8 586 aa16.24■□□□□ 0.19
USB1-213ENST00000566292 AIG1Q9NVV5 245 aa16.24■□□□□ 0.19
USB1-213ENST00000566292 BTNL2Q9UIR0 455 aa16.24■□□□□ 0.19
USB1-213ENST00000566292 SLC35A3Q9Y2D2 325 aa16.24■□□□□ 0.19
USB1-213ENST00000566292 HMGN4O00479 90 aa16.23■□□□□ 0.19
USB1-213ENST00000566292 ZNF500O60304 480 aaPredicted RBP16.23■□□□□ 0.19
USB1-213ENST00000566292 ADAM11O75078 769 aa16.23■□□□□ 0.19
USB1-213ENST00000566292 LY6G6DO95868 133 aa16.23■□□□□ 0.19
USB1-213ENST00000566292 HEXAP06865 529 aa16.23■□□□□ 0.19
USB1-213ENST00000566292 FESP07332 822 aa16.23■□□□□ 0.19
USB1-213ENST00000566292 RYKP34925 604 aa16.23■□□□□ 0.19
USB1-213ENST00000566292 WDR4P57081 412 aaKnown RBP16.23■□□□□ 0.19
USB1-213ENST00000566292 CHRNEQ04844 493 aa16.23■□□□□ 0.19
USB1-213ENST00000566292 ITGADQ13349 1161 aa16.23■□□□□ 0.19
USB1-213ENST00000566292 P2RY6Q15077 328 aa16.23■□□□□ 0.19
USB1-213ENST00000566292 GPAT3Q53EU6 434 aa16.23■□□□□ 0.19
USB1-213ENST00000566292 NCMAPQ5T1S8 102 aa16.23■□□□□ 0.19
USB1-213ENST00000566292 ABLIM2Q6H8Q1 611 aa16.23■□□□□ 0.19
USB1-213ENST00000566292 Q6ZT83 130 aa16.23■□□□□ 0.19
USB1-213ENST00000566292 LSRQ86X29 649 aaPredicted RBP16.23■□□□□ 0.19
USB1-213ENST00000566292 RNF130Q86XS8 419 aa16.23■□□□□ 0.19
USB1-213ENST00000566292 ANKRD42Q8N9B4 389 aa16.23■□□□□ 0.19
USB1-213ENST00000566292 TMEM171Q8WVE6 324 aa16.23■□□□□ 0.19
USB1-213ENST00000566292 HSD17B8Q92506 261 aa16.23■□□□□ 0.19
USB1-213ENST00000566292 INPP5KQ9BT40 448 aa16.23■□□□□ 0.19
USB1-213ENST00000566292 SERINC1Q9NRX5 453 aa16.23■□□□□ 0.19
USB1-213ENST00000566292 ZNF701Q9NV72 531 aaPredicted RBP16.23■□□□□ 0.19
USB1-213ENST00000566292 CSPG4Q6UVK1 2322 aa16.22■□□□□ 0.19
USB1-213ENST00000566292 ZNF724A8MTY0 619 aa16.22■□□□□ 0.19
USB1-213ENST00000566292 SULT2B1O00204 365 aa16.22■□□□□ 0.19
USB1-213ENST00000566292 APOBEC1P41238 236 aaKnown RBP16.22■□□□□ 0.19
USB1-213ENST00000566292 CDKN2CP42773 168 aa16.22■□□□□ 0.19
USB1-213ENST00000566292 KCNJ10P78508 379 aa16.22■□□□□ 0.19
USB1-213ENST00000566292 SYPL1Q16563 259 aa16.22■□□□□ 0.19
USB1-213ENST00000566292 HHATQ5VTY9 493 aa16.22■□□□□ 0.19
USB1-213ENST00000566292 ADAM5Q6NVV9 412 aa16.22■□□□□ 0.19
USB1-213ENST00000566292 BHLHA15Q7RTS1 189 aaPredicted RBP16.22■□□□□ 0.19
USB1-213ENST00000566292 ANKFN1Q8N957 763 aa16.22■□□□□ 0.19
USB1-213ENST00000566292 ZNF563Q8TA94 476 aa16.22■□□□□ 0.19
USB1-213ENST00000566292 SLC25A43Q8WUT9 341 aaPredicted RBP16.22■□□□□ 0.19
USB1-213ENST00000566292 DNAJA3Q96EY1 480 aa16.22■□□□□ 0.19
USB1-213ENST00000566292 ARL5BQ96KC2 179 aa16.22■□□□□ 0.19
USB1-213ENST00000566292 BDH2Q9BUT1 245 aa16.22■□□□□ 0.19
USB1-213ENST00000566292 POTEKPQ9BYX7 375 aa16.22■□□□□ 0.19
USB1-213ENST00000566292 SLC38A1Q9H2H9 487 aa16.22■□□□□ 0.19
USB1-213ENST00000566292 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.22■□□□□ 0.19
USB1-213ENST00000566292 CHRNA9Q9UGM1 479 aa16.22■□□□□ 0.19
USB1-213ENST00000566292 RNF115Q9Y4L5 304 aa16.22■□□□□ 0.19
USB1-213ENST00000566292 GPR45Q9Y5Y3 372 aa16.22■□□□□ 0.19
USB1-213ENST00000566292 CCDC154A6NI56 674 aa16.21■□□□□ 0.19
USB1-213ENST00000566292 SMAD7O15105 426 aaKnown RBP16.21■□□□□ 0.19
USB1-213ENST00000566292 LYZL6O75951 148 aa16.21■□□□□ 0.19
USB1-213ENST00000566292 CHRM4P08173 479 aa16.21■□□□□ 0.19
USB1-213ENST00000566292 TFPIP10646 304 aa16.21■□□□□ 0.19
USB1-213ENST00000566292 EPHA3P29320 983 aa16.21■□□□□ 0.19
USB1-213ENST00000566292 CSNK2A1P68400 391 aaPredicted RBP16.21■□□□□ 0.19
USB1-213ENST00000566292 CAPRIN1Q14444 709 aaKnown RBP16.21■□□□□ 0.19
USB1-213ENST00000566292 GRINAQ7Z429 371 aa16.21■□□□□ 0.19
USB1-213ENST00000566292 SPATA19Q7Z5L4 167 aa16.21■□□□□ 0.19
USB1-213ENST00000566292 ADGRG3Q86Y34 549 aa16.21■□□□□ 0.19
USB1-213ENST00000566292 PIWIL2Q8TC59 973 aaKnown RBP16.21■□□□□ 0.19
USB1-213ENST00000566292 CNOT9Q92600 299 aaKnown RBP16.21■□□□□ 0.19
USB1-213ENST00000566292 NEUROG1Q92886 237 aa16.21■□□□□ 0.19
USB1-213ENST00000566292 PANX1Q96RD7 426 aa16.21■□□□□ 0.19
USB1-213ENST00000566292 CXorf56Q9H5V9 222 aa16.21■□□□□ 0.19
USB1-213ENST00000566292 WDR55Q9H6Y2 383 aaPredicted RBP16.21■□□□□ 0.19
USB1-213ENST00000566292 EXOSC3Q9NQT5 275 aaKnown RBP16.21■□□□□ 0.19
USB1-213ENST00000566292 IGKV3D-15A0A087WSY6 115 aa16.2■□□□□ 0.18
USB1-213ENST00000566292 GOLGA8QA0A0J9YX86 632 aa16.2■□□□□ 0.18
USB1-213ENST00000566292 TMEM120BA0PK00 339 aa16.2■□□□□ 0.18
USB1-213ENST00000566292 GOLGA8OA6NCC3 632 aa16.2■□□□□ 0.18
USB1-213ENST00000566292 FAM171A2A8MVW0 826 aa16.2■□□□□ 0.18
USB1-213ENST00000566292 GOLGA8NF8WBI6 632 aa16.2■□□□□ 0.18
USB1-213ENST00000566292 AP3D1O14617 1153 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms