RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 PCSK6P29122 969 aa11.47□□□□□ -0.57
SF3B3-206ENST00000565990 AQP1P29972 269 aa11.47□□□□□ -0.57
SF3B3-206ENST00000565990 MAGEA2P43356 314 aa11.47□□□□□ -0.57
SF3B3-206ENST00000565990 KCNJ5P48544 419 aa11.47□□□□□ -0.57
SF3B3-206ENST00000565990 DLX5P56178 289 aa11.47□□□□□ -0.57
SF3B3-206ENST00000565990 CXCR4P61073 352 aa11.47□□□□□ -0.57
SF3B3-206ENST00000565990 SELENOWP63302 87 aa11.47□□□□□ -0.57
SF3B3-206ENST00000565990 PPP2R2BQ00005 443 aa11.47□□□□□ -0.57
SF3B3-206ENST00000565990 SKP2Q13309 424 aa11.47□□□□□ -0.57
SF3B3-206ENST00000565990 RAB39AQ14964 217 aa11.47□□□□□ -0.57
SF3B3-206ENST00000565990 ZNF829Q3KNS6 432 aaPredicted RBP11.47□□□□□ -0.57
SF3B3-206ENST00000565990 CBLN3Q6UW01 205 aa11.47□□□□□ -0.57
SF3B3-206ENST00000565990 ZNF836Q6ZNA1 936 aa11.47□□□□□ -0.57
SF3B3-206ENST00000565990 CBLL1Q75N03 491 aa11.47□□□□□ -0.57
SF3B3-206ENST00000565990 HMGN2P46Q86SG4 172 aa11.47□□□□□ -0.57
SF3B3-206ENST00000565990 ARMC8Q8IUR7 673 aa11.47□□□□□ -0.57
SF3B3-206ENST00000565990 SIAH3Q8IW03 269 aa11.47□□□□□ -0.57
SF3B3-206ENST00000565990 PHOSPHO1Q8TCT1 267 aa11.47□□□□□ -0.57
SF3B3-206ENST00000565990 RASSF5Q8WWW0 418 aa11.47□□□□□ -0.57
SF3B3-206ENST00000565990 CNOT9Q92600 299 aaKnown RBP11.47□□□□□ -0.57
SF3B3-206ENST00000565990 SLC47A1Q96FL8 570 aa11.47□□□□□ -0.57
SF3B3-206ENST00000565990 DSN1Q9H410 356 aa11.47□□□□□ -0.57
SF3B3-206ENST00000565990 ARMC7Q9H6L4 198 aa11.47□□□□□ -0.57
SF3B3-206ENST00000565990 EVA1AQ9H8M9 152 aa11.47□□□□□ -0.57
SF3B3-206ENST00000565990 ZDHHC11Q9H8X9 412 aa11.47□□□□□ -0.57
SF3B3-206ENST00000565990 ACKR4Q9NPB9 350 aa11.47□□□□□ -0.57
SF3B3-206ENST00000565990 RLIMQ9NVW2 624 aa11.47□□□□□ -0.57
SF3B3-206ENST00000565990 MED11Q9P086 117 aa11.47□□□□□ -0.57
SF3B3-206ENST00000565990 PPP4R1LQ9P1A2 415 aa11.47□□□□□ -0.57
SF3B3-206ENST00000565990 FBXL2Q9UKC9 423 aa11.47□□□□□ -0.57
SF3B3-206ENST00000565990 SAMD4AQ9UPU9 718 aaKnown RBP11.47□□□□□ -0.57
SF3B3-206ENST00000565990 ZNF443Q9Y2A4 671 aaPredicted RBP11.47□□□□□ -0.57
SF3B3-206ENST00000565990 CARD8Q9Y2G2 431 aa11.47□□□□□ -0.57
SF3B3-206ENST00000565990 ORC6Q9Y5N6 252 aa11.47□□□□□ -0.57
SF3B3-206ENST00000565990 GTPBP1O00178 669 aaKnown RBP11.46□□□□□ -0.57
SF3B3-206ENST00000565990 ETV2O00321 342 aaPredicted RBP11.46□□□□□ -0.57
SF3B3-206ENST00000565990 SYT5O00445 386 aa11.46□□□□□ -0.57
SF3B3-206ENST00000565990 FAAHO00519 579 aa11.46□□□□□ -0.57
SF3B3-206ENST00000565990 GNB5O14775 395 aa11.46□□□□□ -0.57
SF3B3-206ENST00000565990 SUV39H1O43463 412 aa11.46□□□□□ -0.57
SF3B3-206ENST00000565990 ADAM11O75078 769 aa11.46□□□□□ -0.57
SF3B3-206ENST00000565990 SNAP29O95721 258 aa11.46□□□□□ -0.57
SF3B3-206ENST00000565990 LGI1O95970 557 aa11.46□□□□□ -0.57
SF3B3-206ENST00000565990 GNAO1P09471 354 aa11.46□□□□□ -0.57
SF3B3-206ENST00000565990 UBL4AP11441 157 aa11.46□□□□□ -0.57
SF3B3-206ENST00000565990 CD247P20963 164 aa11.46□□□□□ -0.57
SF3B3-206ENST00000565990 ACAA2P42765 397 aaKnown RBP11.46□□□□□ -0.57
SF3B3-206ENST00000565990 P2RX1P51575 399 aa11.46□□□□□ -0.57
SF3B3-206ENST00000565990 SUMO3P55854 103 aaPredicted RBP11.46□□□□□ -0.57
SF3B3-206ENST00000565990 DSCR4P56555 118 aaPredicted RBP11.46□□□□□ -0.57
SF3B3-206ENST00000565990 PPIAP62937 165 aaKnown RBP11.46□□□□□ -0.57
SF3B3-206ENST00000565990 ZNF117Q03924 483 aa11.46□□□□□ -0.57
SF3B3-206ENST00000565990 MOGQ16653 247 aa11.46□□□□□ -0.57
SF3B3-206ENST00000565990 TMEM44Q2T9K0 475 aa11.46□□□□□ -0.57
SF3B3-206ENST00000565990 GLYR1Q49A26 553 aaPredicted RBP11.46□□□□□ -0.57
SF3B3-206ENST00000565990 SOWAHCQ53LP3 525 aaPredicted RBP11.46□□□□□ -0.57
SF3B3-206ENST00000565990 MRPL2Q5T653 305 aaKnown RBP11.46□□□□□ -0.57
SF3B3-206ENST00000565990 OR5M10Q6IEU7 315 aa11.46□□□□□ -0.57
SF3B3-206ENST00000565990 KCTD8Q6ZWB6 473 aa11.46□□□□□ -0.57
SF3B3-206ENST00000565990 SLC22A16Q86VW1 577 aa11.46□□□□□ -0.57
SF3B3-206ENST00000565990 CISD2Q8N5K1 135 aaKnown RBP11.46□□□□□ -0.57
SF3B3-206ENST00000565990 TMEM251Q8N6I4 163 aa11.46□□□□□ -0.57
SF3B3-206ENST00000565990 GATSQ8NAP1 163 aa11.46□□□□□ -0.57
SF3B3-206ENST00000565990 GPR32P1Q8NGA4 272 aa11.46□□□□□ -0.57
SF3B3-206ENST00000565990 OR5W2Q8NH69 310 aa11.46□□□□□ -0.57
SF3B3-206ENST00000565990 FNDC8Q8TC99 324 aa11.46□□□□□ -0.57
SF3B3-206ENST00000565990 GPR119Q8TDV5 335 aa11.46□□□□□ -0.57
SF3B3-206ENST00000565990 FBLIM1Q8WUP2 373 aa11.46□□□□□ -0.57
SF3B3-206ENST00000565990 TMIGD2Q96BF3 282 aa11.46□□□□□ -0.57
SF3B3-206ENST00000565990 SNRNP40Q96DI7 357 aaKnown RBP11.46□□□□□ -0.57
SF3B3-206ENST00000565990 C1GALT1C1Q96EU7 318 aa11.46□□□□□ -0.57
SF3B3-206ENST00000565990 ZNF703Q9H7S9 590 aaPredicted RBP11.46□□□□□ -0.57
SF3B3-206ENST00000565990 PTGES2Q9H7Z7 377 aa11.46□□□□□ -0.57
SF3B3-206ENST00000565990 TBC1D23Q9NUY8 699 aa11.46□□□□□ -0.57
SF3B3-206ENST00000565990 DNAJB12Q9NXW2 375 aaKnown RBP11.46□□□□□ -0.57
SF3B3-206ENST00000565990 LUZP4Q9P127 313 aa11.46□□□□□ -0.57
SF3B3-206ENST00000565990 SEC14L3Q9UDX4 400 aa11.46□□□□□ -0.57
SF3B3-206ENST00000565990 RPS6KA6Q9UK32 745 aa11.46□□□□□ -0.57
SF3B3-206ENST00000565990 NTNG1Q9Y2I2 539 aa11.46□□□□□ -0.57
SF3B3-206ENST00000565990 COL6A6A6NMZ7 2263 aa11.46□□□□□ -0.58
SF3B3-206ENST00000565990 GTF3C1Q12789 2109 aa11.45□□□□□ -0.58
SF3B3-206ENST00000565990 A0A1B0GVC2 190 aa11.45□□□□□ -0.58
SF3B3-206ENST00000565990 ANKUB1A6NFN9 424 aa11.45□□□□□ -0.58
SF3B3-206ENST00000565990 H3BMQ9 156 aa11.45□□□□□ -0.58
SF3B3-206ENST00000565990 HCRTR2O43614 444 aa11.45□□□□□ -0.58
SF3B3-206ENST00000565990 WISP2O76076 250 aa11.45□□□□□ -0.58
SF3B3-206ENST00000565990 CST1P01037 141 aa11.45□□□□□ -0.58
SF3B3-206ENST00000565990 IGHG3P01860 377 aa11.45□□□□□ -0.58
SF3B3-206ENST00000565990 NCK1P16333 377 aa11.45□□□□□ -0.58
SF3B3-206ENST00000565990 CCNA2P20248 432 aa11.45□□□□□ -0.58
SF3B3-206ENST00000565990 CRHBPP24387 322 aa11.45□□□□□ -0.58
SF3B3-206ENST00000565990 MST1P26927 711 aa11.45□□□□□ -0.58
SF3B3-206ENST00000565990 SRD5A2P31213 254 aa11.45□□□□□ -0.58
SF3B3-206ENST00000565990 MASP1P48740 699 aa11.45□□□□□ -0.58
SF3B3-206ENST00000565990 CSNK2BP67870 215 aa11.45□□□□□ -0.58
SF3B3-206ENST00000565990 PMP22Q01453 160 aa11.45□□□□□ -0.58
SF3B3-206ENST00000565990 MVKQ03426 396 aa11.45□□□□□ -0.58
SF3B3-206ENST00000565990 NFATC3Q12968 1075 aa11.45□□□□□ -0.58
SF3B3-206ENST00000565990 KEAP1Q14145 624 aa11.45□□□□□ -0.58
SF3B3-206ENST00000565990 GANABQ14697 944 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms