RNA–Protein interactions for RNA: ENST00000563901.5

SH3GL3-205, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-205ENST00000563901 FNDC11Q9BVV2 318 aa24.43■■□□□ 1.5
SH3GL3-205ENST00000563901 OR2M5A3KFT3 312 aa24.42■■□□□ 1.5
SH3GL3-205ENST00000563901 NPIPA5E9PKD4 350 aa24.42■■□□□ 1.5
SH3GL3-205ENST00000563901 OR5F1O95221 314 aa24.42■■□□□ 1.5
SH3GL3-205ENST00000563901 OPN1LWP04000 364 aa24.42■■□□□ 1.5
SH3GL3-205ENST00000563901 SLC25A53Q5H9E4 307 aa24.42■■□□□ 1.5
SH3GL3-205ENST00000563901 ATG4DQ86TL0 474 aaPredicted RBP24.42■■□□□ 1.5
SH3GL3-205ENST00000563901 NKAIN4Q8IVV8 208 aa24.42■■□□□ 1.5
SH3GL3-205ENST00000563901 SIAH3Q8IW03 269 aa24.42■■□□□ 1.5
SH3GL3-205ENST00000563901 LRTOMTQ8WZ04 291 aa24.42■■□□□ 1.5
SH3GL3-205ENST00000563901 STMN2Q93045 179 aa24.42■■□□□ 1.5
SH3GL3-205ENST00000563901 TMEM185BQ9H7F4 350 aa24.42■■□□□ 1.5
SH3GL3-205ENST00000563901 NMNAT1Q9HAN9 279 aaPredicted RBP24.42■■□□□ 1.5
SH3GL3-205ENST00000563901 NPIPA1Q9UND3 350 aa24.42■■□□□ 1.5
SH3GL3-205ENST00000563901 H0YHG0 523 aa24.41■■□□□ 1.5
SH3GL3-205ENST00000563901 ETV2O00321 342 aaPredicted RBP24.41■■□□□ 1.5
SH3GL3-205ENST00000563901 ZNHIT1O43257 154 aa24.41■■□□□ 1.5
SH3GL3-205ENST00000563901 CST1P01037 141 aa24.41■■□□□ 1.5
SH3GL3-205ENST00000563901 SLC10A1Q14973 349 aa24.41■■□□□ 1.5
SH3GL3-205ENST00000563901 ULK3Q6PHR2 472 aa24.41■■□□□ 1.5
SH3GL3-205ENST00000563901 ADGRG3Q86Y34 549 aa24.41■■□□□ 1.5
SH3GL3-205ENST00000563901 P3H2Q8IVL5 708 aa24.41■■□□□ 1.5
SH3GL3-205ENST00000563901 OFCC1Q8IZS5 231 aa24.41■■□□□ 1.5
SH3GL3-205ENST00000563901 GTPBP8Q8N3Z3 284 aaPredicted RBP24.41■■□□□ 1.5
SH3GL3-205ENST00000563901 ATP6V1C2Q8NEY4 427 aa24.41■■□□□ 1.5
SH3GL3-205ENST00000563901 DNAJA3Q96EY1 480 aa24.41■■□□□ 1.5
SH3GL3-205ENST00000563901 WBP1Q96G27 269 aa24.41■■□□□ 1.5
SH3GL3-205ENST00000563901 MRGPRX4Q96LA9 322 aa24.41■■□□□ 1.5
SH3GL3-205ENST00000563901 PRSS27Q9BQR3 290 aa24.41■■□□□ 1.5
SH3GL3-205ENST00000563901 MRPS18CQ9Y3D5 142 aaKnown RBP24.41■■□□□ 1.5
SH3GL3-205ENST00000563901 IGSF10Q6WRI0 2623 aa24.41■■□□□ 1.5
SH3GL3-205ENST00000563901 DNAJC13O75165 2243 aa24.4■■□□□ 1.5
SH3GL3-205ENST00000563901 TMED7-TICAM2A0A0A6YYA0 188 aa24.4■■□□□ 1.5
SH3GL3-205ENST00000563901 H0Y3Z8 333 aa24.4■■□□□ 1.5
SH3GL3-205ENST00000563901 PEPDP12955 493 aa24.4■■□□□ 1.5
SH3GL3-205ENST00000563901 POLR2HP52434 150 aaKnown RBP24.4■■□□□ 1.5
SH3GL3-205ENST00000563901 IST1P53990 364 aa24.4■■□□□ 1.5
SH3GL3-205ENST00000563901 FAM180AQ6UWF9 173 aa24.4■■□□□ 1.5
SH3GL3-205ENST00000563901 TRILQ7L0X0 811 aa24.4■■□□□ 1.5
SH3GL3-205ENST00000563901 SFXN2Q96NB2 322 aa24.4■■□□□ 1.5
SH3GL3-205ENST00000563901 ZNF347Q96SE7 839 aa24.4■■□□□ 1.5
SH3GL3-205ENST00000563901 QPCTLQ9NXS2 382 aa24.4■■□□□ 1.5
SH3GL3-205ENST00000563901 TNFRSF10DQ9UBN6 386 aa24.4■■□□□ 1.5
SH3GL3-205ENST00000563901 TMED7Q9Y3B3 224 aa24.4■■□□□ 1.5
SH3GL3-205ENST00000563901 U3KQV3 271 aa24.4■■□□□ 1.5
SH3GL3-205ENST00000563901 CHP2O43745 196 aa24.39■■□□□ 1.5
SH3GL3-205ENST00000563901 DLX5P56178 289 aa24.39■■□□□ 1.5
SH3GL3-205ENST00000563901 LSM11P83369 360 aaKnown RBP eCLIP24.39■■□□□ 1.5
SH3GL3-205ENST00000563901 HSF1Q00613 529 aa24.39■■□□□ 1.5
SH3GL3-205ENST00000563901 NFATC3Q12968 1075 aa24.39■■□□□ 1.5
SH3GL3-205ENST00000563901 OR2T5Q6IEZ7 315 aa24.39■■□□□ 1.5
SH3GL3-205ENST00000563901 HMBOX1Q6NT76 420 aa24.39■■□□□ 1.5
SH3GL3-205ENST00000563901 ZFP1Q6P2D0 407 aa24.39■■□□□ 1.5
SH3GL3-205ENST00000563901 AMIGO2Q86SJ2 522 aa24.39■■□□□ 1.5
SH3GL3-205ENST00000563901 LILRA2Q8N149 483 aa24.39■■□□□ 1.5
SH3GL3-205ENST00000563901 PIK3C3Q8NEB9 887 aa24.39■■□□□ 1.5
SH3GL3-205ENST00000563901 OR2T29Q8NH02 315 aa24.39■■□□□ 1.5
SH3GL3-205ENST00000563901 TMEM255BQ8WV15 326 aa24.39■■□□□ 1.5
SH3GL3-205ENST00000563901 DNAJA4Q8WW22 397 aaPredicted RBP24.39■■□□□ 1.5
SH3GL3-205ENST00000563901 SLC38A4Q969I6 547 aa24.39■■□□□ 1.5
SH3GL3-205ENST00000563901 SNRNP40Q96DI7 357 aaKnown RBP24.39■■□□□ 1.5
SH3GL3-205ENST00000563901 ZNF337Q9Y3M9 751 aa24.39■■□□□ 1.5
SH3GL3-205ENST00000563901 TMEM72A0PK05 275 aa24.39■■□□□ 1.49
SH3GL3-205ENST00000563901 C7orf72A4D263 438 aa24.39■■□□□ 1.49
SH3GL3-205ENST00000563901 H3BML4 177 aa24.39■■□□□ 1.49
SH3GL3-205ENST00000563901 H1F0P07305 194 aaKnown RBP24.39■■□□□ 1.49
SH3GL3-205ENST00000563901 ST3GAL3Q11203 375 aa24.39■■□□□ 1.49
SH3GL3-205ENST00000563901 PKP2Q99959 881 aa24.39■■□□□ 1.49
SH3GL3-205ENST00000563901 PIGQQ9BRB3 760 aa24.39■■□□□ 1.49
SH3GL3-205ENST00000563901 POLR2J2Q9GZM3 115 aaKnown RBP24.39■■□□□ 1.49
SH3GL3-205ENST00000563901 POLR2J3Q9H1A7 115 aaKnown RBP24.39■■□□□ 1.49
SH3GL3-205ENST00000563901 LDAHQ9H6V9 325 aa24.39■■□□□ 1.49
SH3GL3-205ENST00000563901 YY1AP1Q9H869 796 aa24.39■■□□□ 1.49
SH3GL3-205ENST00000563901 ACKR4Q9NPB9 350 aa24.39■■□□□ 1.49
SH3GL3-205ENST00000563901 SELENONQ9NZV5 590 aa24.39■■□□□ 1.49
SH3GL3-205ENST00000563901 TRBV4-1A0A0J9YWV2 114 aa24.38■■□□□ 1.49
SH3GL3-205ENST00000563901 ELOA3DA6NLF2 546 aaPredicted RBP24.38■■□□□ 1.49
SH3GL3-205ENST00000563901 HNRNPRO43390 633 aaKnown RBP24.38■■□□□ 1.49
SH3GL3-205ENST00000563901 SUSD5O60279 629 aa24.38■■□□□ 1.49
SH3GL3-205ENST00000563901 CRYABP02511 175 aaKnown RBP24.38■■□□□ 1.49
SH3GL3-205ENST00000563901 ZNF17P17021 662 aa24.38■■□□□ 1.49
SH3GL3-205ENST00000563901 SHC1P29353 583 aa24.38■■□□□ 1.49
SH3GL3-205ENST00000563901 EIF1P41567 113 aaKnown RBP24.38■■□□□ 1.49
SH3GL3-205ENST00000563901 STARP49675 285 aa24.38■■□□□ 1.49
SH3GL3-205ENST00000563901 GFRA1P56159 465 aa24.38■■□□□ 1.49
SH3GL3-205ENST00000563901 LAPTM4AQ15012 233 aa24.38■■□□□ 1.49
SH3GL3-205ENST00000563901 ELOA3BQ3SY89 546 aa24.38■■□□□ 1.49
SH3GL3-205ENST00000563901 GLYR1Q49A26 553 aaPredicted RBP24.38■■□□□ 1.49
SH3GL3-205ENST00000563901 FGD3Q5JSP0 725 aa24.38■■□□□ 1.49
SH3GL3-205ENST00000563901 DCST1Q5T197 706 aa24.38■■□□□ 1.49
SH3GL3-205ENST00000563901 ELOA3Q8NG57 546 aa24.38■■□□□ 1.49
SH3GL3-205ENST00000563901 SMPDL3BQ92485 455 aa24.38■■□□□ 1.49
SH3GL3-205ENST00000563901 DHRS1Q96LJ7 313 aa24.38■■□□□ 1.49
SH3GL3-205ENST00000563901 OR11A1Q9GZK7 315 aa24.38■■□□□ 1.49
SH3GL3-205ENST00000563901 SEMA6AQ9H2E6 1030 aa24.38■■□□□ 1.49
SH3GL3-205ENST00000563901 EXO5Q9H790 373 aa24.38■■□□□ 1.49
SH3GL3-205ENST00000563901 ZC3H12DA2A288 527 aaKnown RBP24.37■■□□□ 1.49
SH3GL3-205ENST00000563901 GADD45GO95257 159 aa24.37■■□□□ 1.49
SH3GL3-205ENST00000563901 CXCR1P25024 350 aa24.37■■□□□ 1.49
SH3GL3-205ENST00000563901 RCN1Q15293 331 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms