RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 SPERTQ8NA61 448 aa8.85□□□□□ -0.99
HDGFL3-204ENST00000563790 DUSP19Q8WTR2 217 aa8.85□□□□□ -0.99
HDGFL3-204ENST00000563790 APH1AQ96BI3 265 aa8.85□□□□□ -0.99
HDGFL3-204ENST00000563790 C16orf58Q96GQ5 468 aa8.85□□□□□ -0.99
HDGFL3-204ENST00000563790 MRGPRX4Q96LA9 322 aa8.85□□□□□ -0.99
HDGFL3-204ENST00000563790 DIRC2Q96SL1 478 aa8.85□□□□□ -0.99
HDGFL3-204ENST00000563790 FAM167BQ9BTA0 163 aa8.85□□□□□ -0.99
HDGFL3-204ENST00000563790 KRTAP9-2Q9BYQ4 174 aa8.85□□□□□ -0.99
HDGFL3-204ENST00000563790 RTN4RQ9BZR6 473 aa8.85□□□□□ -0.99
HDGFL3-204ENST00000563790 PARVBQ9HBI1 364 aa8.85□□□□□ -0.99
HDGFL3-204ENST00000563790 OBP2BQ9NPH6 170 aa8.85□□□□□ -0.99
HDGFL3-204ENST00000563790 INPP5EQ9NRR6 644 aa8.85□□□□□ -0.99
HDGFL3-204ENST00000563790 CRNNQ9UBG3 495 aaPredicted RBP8.85□□□□□ -0.99
HDGFL3-204ENST00000563790 VPREB3Q9UKI3 123 aa8.85□□□□□ -0.99
HDGFL3-204ENST00000563790 TNCP24821 2201 aa8.85□□□□□ -0.99
HDGFL3-204ENST00000563790 IGLV3-32A0A0A0MS00 114 aa8.84□□□□□ -0.99
HDGFL3-204ENST00000563790 IGHV3-15A0A0B4J1V0 119 aa8.84□□□□□ -0.99
HDGFL3-204ENST00000563790 IGHV1-69-2A0A0G2JMI3 117 aa8.84□□□□□ -0.99
HDGFL3-204ENST00000563790 OR6C65A6NJZ3 312 aa8.84□□□□□ -0.99
HDGFL3-204ENST00000563790 WASHC1A8K0Z3 465 aa8.84□□□□□ -0.99
HDGFL3-204ENST00000563790 GMFGO60234 142 aa8.84□□□□□ -0.99
HDGFL3-204ENST00000563790 FADS1O60427 444 aa8.84□□□□□ -0.99
HDGFL3-204ENST00000563790 CYTIPO60759 359 aa8.84□□□□□ -0.99
HDGFL3-204ENST00000563790 RAMP3O60896 148 aa8.84□□□□□ -0.99
HDGFL3-204ENST00000563790 VSIG10L2P0DP72 767 aa8.84□□□□□ -0.99
HDGFL3-204ENST00000563790 SFTPDP35247 375 aa8.84□□□□□ -0.99
HDGFL3-204ENST00000563790 MAGEB1P43366 347 aa8.84□□□□□ -0.99
HDGFL3-204ENST00000563790 GATA4P43694 442 aa8.84□□□□□ -0.99
HDGFL3-204ENST00000563790 KCNJ1P48048 391 aa8.84□□□□□ -0.99
HDGFL3-204ENST00000563790 SLC6A9P48067 706 aa8.84□□□□□ -0.99
HDGFL3-204ENST00000563790 PGGT1BP53609 377 aa8.84□□□□□ -0.99
HDGFL3-204ENST00000563790 CDKN2DP55273 166 aa8.84□□□□□ -0.99
HDGFL3-204ENST00000563790 TGFBR3Q03167 851 aa8.84□□□□□ -0.99
HDGFL3-204ENST00000563790 LARP4Q71RC2 724 aaKnown RBP eCLIP8.84□□□□□ -0.99
HDGFL3-204ENST00000563790 SYCE1Q8N0S2 351 aa8.84□□□□□ -0.99
HDGFL3-204ENST00000563790 TFAP2CQ92754 450 aa8.84□□□□□ -0.99
HDGFL3-204ENST00000563790 DNAJA3Q96EY1 480 aa8.84□□□□□ -0.99
HDGFL3-204ENST00000563790 BOD1Q96IK1 185 aa8.84□□□□□ -0.99
HDGFL3-204ENST00000563790 RNF145Q96MT1 663 aa8.84□□□□□ -0.99
HDGFL3-204ENST00000563790 F2RL3Q96RI0 385 aa8.84□□□□□ -0.99
HDGFL3-204ENST00000563790 A0A087WZY1 265 aa8.83□□□□□ -1
HDGFL3-204ENST00000563790 A0A1W2PS29 197 aa8.83□□□□□ -1
HDGFL3-204ENST00000563790 ISPDA4D126 451 aa8.83□□□□□ -1
HDGFL3-204ENST00000563790 AP3B1O00203 1094 aa8.83□□□□□ -1
HDGFL3-204ENST00000563790 PF4P02776 101 aa8.83□□□□□ -1
HDGFL3-204ENST00000563790 PTMAP06454 111 aaKnown RBP8.83□□□□□ -1
HDGFL3-204ENST00000563790 C8GP07360 202 aa8.83□□□□□ -1
HDGFL3-204ENST00000563790 PF4V1P10720 104 aa8.83□□□□□ -1
HDGFL3-204ENST00000563790 NAT2P11245 290 aa8.83□□□□□ -1
HDGFL3-204ENST00000563790 IL12BP29460 328 aa8.83□□□□□ -1
HDGFL3-204ENST00000563790 PIK3CGP48736 1102 aa8.83□□□□□ -1
HDGFL3-204ENST00000563790 SEC61A1P61619 476 aaKnown RBP8.83□□□□□ -1
HDGFL3-204ENST00000563790 RBM20Q5T481 1227 aaKnown RBP8.83□□□□□ -1
HDGFL3-204ENST00000563790 CPTPQ5TA50 214 aa8.83□□□□□ -1
HDGFL3-204ENST00000563790 C9orf135Q5VTT2 229 aa8.83□□□□□ -1
HDGFL3-204ENST00000563790 PAQR3Q6TCH7 311 aa8.83□□□□□ -1
HDGFL3-204ENST00000563790 SRFBP1Q8NEF9 429 aaKnown RBP8.83□□□□□ -1
HDGFL3-204ENST00000563790 ZNF669Q96BR6 464 aaPredicted RBP8.83□□□□□ -1
HDGFL3-204ENST00000563790 RHOXF2Q9BQY4 288 aa8.83□□□□□ -1
HDGFL3-204ENST00000563790 DESI2Q9BSY9 194 aa8.83□□□□□ -1
HDGFL3-204ENST00000563790 COQ10BQ9H8M1 238 aa8.83□□□□□ -1
HDGFL3-204ENST00000563790 SEC61A2Q9H9S3 476 aa8.83□□□□□ -1
HDGFL3-204ENST00000563790 OR5V1Q9UGF6 321 aa8.83□□□□□ -1
HDGFL3-204ENST00000563790 FBXO5Q9UKT4 447 aa8.83□□□□□ -1
HDGFL3-204ENST00000563790 GPR55Q9Y2T6 319 aaPredicted RBP8.83□□□□□ -1
HDGFL3-204ENST00000563790 DYRK1BQ9Y463 629 aa8.83□□□□□ -1
HDGFL3-204ENST00000563790 HMCN2Q8NDA2 5059 aa8.82□□□□□ -1
HDGFL3-204ENST00000563790 A0A1B0GVY2 172 aa8.82□□□□□ -1
HDGFL3-204ENST00000563790 ANKRD61A6NGH8 418 aa8.82□□□□□ -1
HDGFL3-204ENST00000563790 ANKDD1BA6NHY2 528 aa8.82□□□□□ -1
HDGFL3-204ENST00000563790 RTCAO00442 366 aaKnown RBP8.82□□□□□ -1
HDGFL3-204ENST00000563790 PFDN6O15212 129 aa8.82□□□□□ -1
HDGFL3-204ENST00000563790 KRT20P35900 424 aa8.82□□□□□ -1
HDGFL3-204ENST00000563790 PTDSS1P48651 473 aaKnown RBP8.82□□□□□ -1
HDGFL3-204ENST00000563790 MRPS22P82650 360 aaKnown RBP8.82□□□□□ -1
HDGFL3-204ENST00000563790 SNTB2Q13425 540 aaKnown RBP8.82□□□□□ -1
HDGFL3-204ENST00000563790 MAD2L1BPQ15013 274 aaPredicted RBP8.82□□□□□ -1
HDGFL3-204ENST00000563790 SEL1L2Q5TEA6 688 aa8.82□□□□□ -1
HDGFL3-204ENST00000563790 BTNL3Q6UXE8 466 aa8.82□□□□□ -1
HDGFL3-204ENST00000563790 UNQ9370/PRO34162Q6UXP9 181 aa8.82□□□□□ -1
HDGFL3-204ENST00000563790 C4orf22Q6V702 233 aa8.82□□□□□ -1
HDGFL3-204ENST00000563790 GPR180Q86V85 440 aa8.82□□□□□ -1
HDGFL3-204ENST00000563790 ZNF527Q8NB42 609 aa8.82□□□□□ -1
HDGFL3-204ENST00000563790 C2CD4AQ8NCU7 369 aaPredicted RBP8.82□□□□□ -1
HDGFL3-204ENST00000563790 OR52E4Q8NGH9 312 aa8.82□□□□□ -1
HDGFL3-204ENST00000563790 OR2T6Q8NHC8 308 aa8.82□□□□□ -1
HDGFL3-204ENST00000563790 FBXL8Q96CD0 374 aa8.82□□□□□ -1
HDGFL3-204ENST00000563790 SERPINB12Q96P63 405 aa8.82□□□□□ -1
HDGFL3-204ENST00000563790 VPS11Q9H270 941 aa8.82□□□□□ -1
HDGFL3-204ENST00000563790 ACOXLQ9NUZ1 547 aa8.82□□□□□ -1
HDGFL3-204ENST00000563790 PHF11Q9UIL8 331 aa8.82□□□□□ -1
HDGFL3-204ENST00000563790 COMMD10Q9Y6G5 202 aa8.82□□□□□ -1
HDGFL3-204ENST00000563790 CTAGE9A4FU28 777 aa8.81□□□□□ -1
HDGFL3-204ENST00000563790 PRAMEF4O60810 478 aa8.81□□□□□ -1
HDGFL3-204ENST00000563790 OR12D1P0DN82 309 aa8.81□□□□□ -1
HDGFL3-204ENST00000563790 MLNP12872 115 aa8.81□□□□□ -1
HDGFL3-204ENST00000563790 RAC3P60763 192 aa8.81□□□□□ -1
HDGFL3-204ENST00000563790 CCL8P80075 99 aa8.81□□□□□ -1
HDGFL3-204ENST00000563790 CSTF3Q12996 717 aaKnown RBP8.81□□□□□ -1
HDGFL3-204ENST00000563790 IFT88Q13099 833 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms