RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 EEFSECP57772 596 aaKnown RBP7.66□□□□□ -1.18
UBR1-204ENST00000563239 DMTNQ08495 405 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 RBBP4Q09028 425 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 MERTKQ12866 999 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 PON3Q15166 354 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 MAPRE2Q15555 327 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 TMEM176BQ3YBM2 270 aaPredicted RBP7.66□□□□□ -1.18
UBR1-204ENST00000563239 GLIPR1L2Q4G1C9 344 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 ZNF311Q5JNZ3 666 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 ZNF787Q6DD87 383 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 DHRS4L2Q6PKH6 230 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 ESPNLQ6ZVH7 1005 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 CPLX4Q7Z7G2 160 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 SERPINA11Q86U17 422 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 ADGRG3Q86Y34 549 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 HIPK4Q8NE63 616 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 OR8J3Q8NGG0 315 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 OR10A6Q8NH74 314 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 INTS12Q96CB8 462 aaKnown RBP7.66□□□□□ -1.18
UBR1-204ENST00000563239 KLHL15Q96M94 604 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 ZNF583Q96ND8 569 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 TM9SF2Q99805 663 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 SRXN1Q9BYN0 137 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 ADAM19Q9H013 955 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 RNF122Q9H9V4 155 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 CTPS2Q9NRF8 586 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 CMTM6Q9NX76 183 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 JKAMPQ9P055 326 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 GMPR2Q9P2T1 348 aaKnown RBP7.66□□□□□ -1.18
UBR1-204ENST00000563239 ZNF629Q9UEG4 869 aaPredicted RBP7.66□□□□□ -1.18
UBR1-204ENST00000563239 OSGIN1Q9UJX0 560 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 IFT52Q9Y366 437 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 ZNF175Q9Y473 711 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 APCP25054 2843 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 DOCK7Q96N67 2140 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 CREBBPQ92793 2442 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 LRBAP50851 2863 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 A0A1W2PNR3 127 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 A0A1W2PNV4 684 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 TMEM247A6NEH6 219 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 TMEM229AB2RXF0 380 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 M0QX08 132 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 TPST2O60704 377 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 SHOX2O60902 331 aaPredicted RBP7.65□□□□□ -1.18
UBR1-204ENST00000563239 IL18BPO95998 194 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 TMIGD3P0DMS9 266 aaPredicted RBP7.65□□□□□ -1.18
UBR1-204ENST00000563239 BMP5P22003 454 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 TACR3P29371 465 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 AQP1P29972 269 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 PCGF2P35227 344 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 APOBEC1P41238 236 aaKnown RBP7.65□□□□□ -1.18
UBR1-204ENST00000563239 SLC1A3P43003 542 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 KIR2DL2P43627 348 aaPredicted RBP7.65□□□□□ -1.18
UBR1-204ENST00000563239 EIF1AXP47813 144 aaKnown RBP7.65□□□□□ -1.18
UBR1-204ENST00000563239 CARD18P57730 90 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 HOXC5Q00444 222 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 SELENBP1Q13228 472 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 CACNA1CQ13936 2221 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 LARS2Q15031 903 aaKnown RBP7.65□□□□□ -1.18
UBR1-204ENST00000563239 CYP51A1Q16850 503 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 ZSWIM7Q19AV6 140 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 SLC25A35Q3KQZ1 300 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 MMEL1Q495T6 779 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 HBMQ6B0K9 141 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 GRINAQ7Z429 371 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 ZNF440Q8IYI8 595 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 GCNT2Q8N0V5 402 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 C11orf65Q8NCR3 313 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 ATP6V1C2Q8NEY4 427 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 GPR32P1Q8NGA4 272 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 ZNF563Q8TA94 476 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 TMEM234Q8WY98 164 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 OSTF1Q92882 214 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 SLC35B4Q969S0 331 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 STARD4Q96DR4 205 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 ZFP3Q96NJ6 502 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 CCT8L2Q96SF2 557 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 PRR14Q9BWN1 585 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 NSRP1Q9H0G5 558 aaKnown RBP7.65□□□□□ -1.18
UBR1-204ENST00000563239 ENKD1Q9H0I2 346 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 PIF1Q9H611 641 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 KCNJ16Q9NPI9 418 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 ZNF232Q9UNY5 417 aa7.65□□□□□ -1.18
UBR1-204ENST00000563239 MED12LQ86YW9 2145 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 HCFC1P51610 2035 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 TMED7-TICAM2A0A0A6YYA0 188 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 TMEM72A0PK05 275 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 ZC3H12DA2A288 527 aaKnown RBP7.64□□□□□ -1.19
UBR1-204ENST00000563239 CCT8L1PA6NM43 557 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 SYT5O00445 386 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 DVL2O14641 736 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 AIM2O14862 343 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 CGAP01215 116 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 OPN1SWP03999 348 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 CD247P20963 164 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 ME2P23368 584 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 HTR2AP28223 471 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 PRDX6P30041 224 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 OPRM1P35372 400 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 POLR2HP52434 150 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms