RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 ICAM5Q9UMF0 924 aa14.11□□□□□ -0.15
USB1-208ENST00000563207 ZNF443Q9Y2A4 671 aaPredicted RBP14.11□□□□□ -0.15
USB1-208ENST00000563207 CARD8Q9Y2G2 431 aa14.11□□□□□ -0.15
USB1-208ENST00000563207 RPH3AQ9Y2J0 694 aaPredicted RBP14.11□□□□□ -0.15
USB1-208ENST00000563207 NF1P21359 2839 aa14.11□□□□□ -0.15
USB1-208ENST00000563207 ITPR3Q14573 2671 aa14.11□□□□□ -0.15
USB1-208ENST00000563207 MED12LQ86YW9 2145 aa14.11□□□□□ -0.15
USB1-208ENST00000563207 CENPVL1A0A0U1RR11 272 aa14.1□□□□□ -0.15
USB1-208ENST00000563207 C7orf72A4D263 438 aa14.1□□□□□ -0.15
USB1-208ENST00000563207 CDHR4A6H8M9 788 aa14.1□□□□□ -0.15
USB1-208ENST00000563207 CCT8L1PA6NM43 557 aa14.1□□□□□ -0.15
USB1-208ENST00000563207 B2RBV5 119 aa14.1□□□□□ -0.15
USB1-208ENST00000563207 EEF1E1-BLOC1S5C9J1V9 151 aa14.1□□□□□ -0.15
USB1-208ENST00000563207 NME4O00746 187 aa14.1□□□□□ -0.15
USB1-208ENST00000563207 EEF1E1O43324 174 aaKnown RBP14.1□□□□□ -0.15
USB1-208ENST00000563207 ZIC3O60481 467 aa14.1□□□□□ -0.15
USB1-208ENST00000563207 ACTL6AO96019 429 aa14.1□□□□□ -0.15
USB1-208ENST00000563207 IFNA14P01570 189 aa14.1□□□□□ -0.15
USB1-208ENST00000563207 UQCRBP14927 111 aa14.1□□□□□ -0.15
USB1-208ENST00000563207 CHMP24386 653 aa14.1□□□□□ -0.15
USB1-208ENST00000563207 ADH6P28332 368 aa14.1□□□□□ -0.15
USB1-208ENST00000563207 PRKAR1BP31321 381 aa14.1□□□□□ -0.15
USB1-208ENST00000563207 EIF1P41567 113 aaKnown RBP14.1□□□□□ -0.15
USB1-208ENST00000563207 GFRA1P56159 465 aa14.1□□□□□ -0.15
USB1-208ENST00000563207 LIPEQ05469 1076 aa14.1□□□□□ -0.15
USB1-208ENST00000563207 SKP2Q13309 424 aa14.1□□□□□ -0.15
USB1-208ENST00000563207 RPS26P11Q5JNZ5 115 aaPredicted RBP14.1□□□□□ -0.15
USB1-208ENST00000563207 AAGABQ6PD74 315 aa14.1□□□□□ -0.15
USB1-208ENST00000563207 DHRS4L2Q6PKH6 230 aa14.1□□□□□ -0.15
USB1-208ENST00000563207 CBLN3Q6UW01 205 aa14.1□□□□□ -0.15
USB1-208ENST00000563207 IFNEQ86WN2 208 aa14.1□□□□□ -0.15
USB1-208ENST00000563207 CDC20BQ86Y33 519 aa14.1□□□□□ -0.15
USB1-208ENST00000563207 MICU2Q8IYU8 434 aa14.1□□□□□ -0.15
USB1-208ENST00000563207 GCNT2Q8N0V5 402 aa14.1□□□□□ -0.15
USB1-208ENST00000563207 ARHGAP24Q8N264 748 aa14.1□□□□□ -0.15
USB1-208ENST00000563207 SH3YL1Q96HL8 342 aaPredicted RBP14.1□□□□□ -0.15
USB1-208ENST00000563207 PIGQQ9BRB3 760 aa14.1□□□□□ -0.15
USB1-208ENST00000563207 CLEC4MQ9H2X3 399 aaPredicted RBP14.1□□□□□ -0.15
USB1-208ENST00000563207 ALG2Q9H553 416 aa14.1□□□□□ -0.15
USB1-208ENST00000563207 STOML1Q9UBI4 398 aa14.1□□□□□ -0.15
USB1-208ENST00000563207 AKAP6Q13023 2319 aa14.1□□□□□ -0.15
USB1-208ENST00000563207 A6NNC1 897 aa14.09□□□□□ -0.15
USB1-208ENST00000563207 CLCA1A8K7I4 914 aa14.09□□□□□ -0.15
USB1-208ENST00000563207 FAAHO00519 579 aa14.09□□□□□ -0.15
USB1-208ENST00000563207 UBTFL6P0CB48 400 aaPredicted RBP14.09□□□□□ -0.15
USB1-208ENST00000563207 T-ENOLP0DO92 83 aa14.09□□□□□ -0.15
USB1-208ENST00000563207 CPN1P15169 458 aa14.09□□□□□ -0.15
USB1-208ENST00000563207 ZNF17P17021 662 aa14.09□□□□□ -0.15
USB1-208ENST00000563207 HK1P19367 917 aa14.09□□□□□ -0.15
USB1-208ENST00000563207 PGCP20142 388 aa14.09□□□□□ -0.15
USB1-208ENST00000563207 CTSSP25774 331 aa14.09□□□□□ -0.15
USB1-208ENST00000563207 LHX2P50458 406 aa14.09□□□□□ -0.15
USB1-208ENST00000563207 B3GALT5-AS1P59052 145 aa14.09□□□□□ -0.15
USB1-208ENST00000563207 EEF1A1P68104 462 aaKnown RBP14.09□□□□□ -0.15
USB1-208ENST00000563207 FBXL19-AS1Q494R0 122 aa14.09□□□□□ -0.15
USB1-208ENST00000563207 SAMD4BQ5PRF9 694 aaKnown RBP14.09□□□□□ -0.15
USB1-208ENST00000563207 MRPL2Q5T653 305 aaKnown RBP14.09□□□□□ -0.15
USB1-208ENST00000563207 ZNF550Q7Z398 422 aa14.09□□□□□ -0.15
USB1-208ENST00000563207 ADGRE4PQ86SQ3 457 aa14.09□□□□□ -0.15
USB1-208ENST00000563207 VRK2Q86Y07 508 aa14.09□□□□□ -0.15
USB1-208ENST00000563207 ARMC8Q8IUR7 673 aa14.09□□□□□ -0.15
USB1-208ENST00000563207 TMCO5AQ8N6Q1 288 aa14.09□□□□□ -0.15
USB1-208ENST00000563207 OR5M1Q8NGP8 315 aa14.09□□□□□ -0.15
USB1-208ENST00000563207 ZPLD1Q8TCW7 415 aa14.09□□□□□ -0.15
USB1-208ENST00000563207 GPR119Q8TDV5 335 aa14.09□□□□□ -0.15
USB1-208ENST00000563207 TMEM234Q8WY98 164 aa14.09□□□□□ -0.15
USB1-208ENST00000563207 INTS12Q96CB8 462 aaKnown RBP14.09□□□□□ -0.15
USB1-208ENST00000563207 PINK1Q9BXM7 581 aa14.09□□□□□ -0.15
USB1-208ENST00000563207 PIF1Q9H611 641 aa14.09□□□□□ -0.15
USB1-208ENST00000563207 CALHM2Q9HA72 323 aa14.09□□□□□ -0.15
USB1-208ENST00000563207 JKAMPQ9P055 326 aa14.09□□□□□ -0.15
USB1-208ENST00000563207 PLEKHA6Q9Y2H5 1048 aa14.09□□□□□ -0.15
USB1-208ENST00000563207 SETD2Q9BYW2 2564 aaPredicted RBP14.08□□□□□ -0.16
USB1-208ENST00000563207 VPS13CQ709C8 3753 aa14.08□□□□□ -0.16
USB1-208ENST00000563207 H0Y3Z8 333 aa14.08□□□□□ -0.16
USB1-208ENST00000563207 H0YC42 278 aa14.08□□□□□ -0.16
USB1-208ENST00000563207 M0QX08 132 aa14.08□□□□□ -0.16
USB1-208ENST00000563207 ETV2O00321 342 aaPredicted RBP14.08□□□□□ -0.16
USB1-208ENST00000563207 CYP7B1O75881 506 aa14.08□□□□□ -0.16
USB1-208ENST00000563207 MFN2O95140 757 aa14.08□□□□□ -0.16
USB1-208ENST00000563207 NUDT14O95848 222 aa14.08□□□□□ -0.16
USB1-208ENST00000563207 TGM6O95932 706 aa14.08□□□□□ -0.16
USB1-208ENST00000563207 C8BP07358 591 aa14.08□□□□□ -0.16
USB1-208ENST00000563207 LINGO3P0C6S8 592 aa14.08□□□□□ -0.16
USB1-208ENST00000563207 TMIGD3P0DMS9 266 aaPredicted RBP14.08□□□□□ -0.16
USB1-208ENST00000563207 CPOXP36551 454 aa14.08□□□□□ -0.16
USB1-208ENST00000563207 GSK3BP49841 420 aa14.08□□□□□ -0.16
USB1-208ENST00000563207 TPD52P55327 224 aaPredicted RBP14.08□□□□□ -0.16
USB1-208ENST00000563207 CLDN15P56746 228 aa14.08□□□□□ -0.16
USB1-208ENST00000563207 CLDN18P56856 261 aa14.08□□□□□ -0.16
USB1-208ENST00000563207 SLC25A3Q00325 362 aa14.08□□□□□ -0.16
USB1-208ENST00000563207 BCL2A1Q16548 175 aa14.08□□□□□ -0.16
USB1-208ENST00000563207 PLPPR5Q32ZL2 321 aa14.08□□□□□ -0.16
USB1-208ENST00000563207 ENPP6Q6UWR7 440 aa14.08□□□□□ -0.16
USB1-208ENST00000563207 ZNF836Q6ZNA1 936 aa14.08□□□□□ -0.16
USB1-208ENST00000563207 LUZP2Q86TE4 346 aa14.08□□□□□ -0.16
USB1-208ENST00000563207 GTPBP8Q8N3Z3 284 aaPredicted RBP14.08□□□□□ -0.16
USB1-208ENST00000563207 SLC26A7Q8TE54 656 aa14.08□□□□□ -0.16
USB1-208ENST00000563207 ST8SIA1Q92185 356 aa14.08□□□□□ -0.16
USB1-208ENST00000563207 KCTD14Q9BQ13 255 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms