RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 TMEM185BQ9H7F4 350 aa14.86□□□□□ -0.03
CDT1-202ENST00000562747 PRDM4Q9UKN5 801 aa14.86□□□□□ -0.03
CDT1-202ENST00000562747 ZNF232Q9UNY5 417 aa14.86□□□□□ -0.03
CDT1-202ENST00000562747 IFT52Q9Y366 437 aa14.86□□□□□ -0.03
CDT1-202ENST00000562747 ANKHD1Q8IWZ3 2542 aaKnown RBP14.86□□□□□ -0.03
CDT1-202ENST00000562747 A0A0J9YW62 118 aa14.85□□□□□ -0.03
CDT1-202ENST00000562747 CDHR4A6H8M9 788 aa14.85□□□□□ -0.03
CDT1-202ENST00000562747 BBIP1A8MTZ0 92 aa14.85□□□□□ -0.03
CDT1-202ENST00000562747 FAAHO00519 579 aa14.85□□□□□ -0.03
CDT1-202ENST00000562747 TNFSF11O14788 317 aa14.85□□□□□ -0.03
CDT1-202ENST00000562747 CTAG2O75638 210 aa14.85□□□□□ -0.03
CDT1-202ENST00000562747 PGM3O95394 542 aa14.85□□□□□ -0.03
CDT1-202ENST00000562747 ETS2P15036 469 aa14.85□□□□□ -0.03
CDT1-202ENST00000562747 SFTPDP35247 375 aa14.85□□□□□ -0.03
CDT1-202ENST00000562747 ASCL1P50553 236 aa14.85□□□□□ -0.03
CDT1-202ENST00000562747 FOXF2Q12947 444 aa14.85□□□□□ -0.03
CDT1-202ENST00000562747 FBXL19-AS1Q494R0 122 aa14.85□□□□□ -0.03
CDT1-202ENST00000562747 HBMQ6B0K9 141 aa14.85□□□□□ -0.03
CDT1-202ENST00000562747 C3orf33Q6P1S2 294 aa14.85□□□□□ -0.03
CDT1-202ENST00000562747 ZNF836Q6ZNA1 936 aa14.85□□□□□ -0.03
CDT1-202ENST00000562747 PLEKHM3Q6ZWE6 761 aa14.85□□□□□ -0.03
CDT1-202ENST00000562747 VRK2Q86Y07 508 aa14.85□□□□□ -0.03
CDT1-202ENST00000562747 ZZZ3Q8IYH5 903 aa14.85□□□□□ -0.03
CDT1-202ENST00000562747 C10orf111Q8N326 155 aa14.85□□□□□ -0.03
CDT1-202ENST00000562747 FNDC9Q8TBE3 224 aa14.85□□□□□ -0.03
CDT1-202ENST00000562747 FIG4Q92562 907 aa14.85□□□□□ -0.03
CDT1-202ENST00000562747 LRRC46Q96FV0 321 aa14.85□□□□□ -0.03
CDT1-202ENST00000562747 GPATCH1Q9BRR8 931 aaKnown RBP14.85□□□□□ -0.03
CDT1-202ENST00000562747 ARMC7Q9H6L4 198 aa14.85□□□□□ -0.03
CDT1-202ENST00000562747 RNF122Q9H9V4 155 aa14.85□□□□□ -0.03
CDT1-202ENST00000562747 SERINC1Q9NRX5 453 aa14.85□□□□□ -0.03
CDT1-202ENST00000562747 MCTS1Q9ULC4 181 aaKnown RBP14.85□□□□□ -0.03
CDT1-202ENST00000562747 ZNF443Q9Y2A4 671 aaPredicted RBP14.85□□□□□ -0.03
CDT1-202ENST00000562747 NAV3Q8IVL0 2385 aa14.84□□□□□ -0.03
CDT1-202ENST00000562747 DNHD1Q96M86 4753 aa14.84□□□□□ -0.03
CDT1-202ENST00000562747 CFAP73A6NFT4 308 aa14.84□□□□□ -0.03
CDT1-202ENST00000562747 FBP2O00757 339 aa14.84□□□□□ -0.03
CDT1-202ENST00000562747 SYNGR4O95473 234 aa14.84□□□□□ -0.03
CDT1-202ENST00000562747 NPPAP01160 153 aa14.84□□□□□ -0.03
CDT1-202ENST00000562747 OPN1LWP04000 364 aa14.84□□□□□ -0.03
CDT1-202ENST00000562747 PABPC4LP0CB38 370 aaKnown RBP14.84□□□□□ -0.03
CDT1-202ENST00000562747 UQCRBP14927 111 aa14.84□□□□□ -0.03
CDT1-202ENST00000562747 KLK2P20151 261 aa14.84□□□□□ -0.03
CDT1-202ENST00000562747 SHC1P29353 583 aa14.84□□□□□ -0.03
CDT1-202ENST00000562747 RYKP34925 604 aa14.84□□□□□ -0.03
CDT1-202ENST00000562747 APOBEC1P41238 236 aaKnown RBP14.84□□□□□ -0.03
CDT1-202ENST00000562747 CDK6Q00534 326 aa14.84□□□□□ -0.03
CDT1-202ENST00000562747 MERTKQ12866 999 aa14.84□□□□□ -0.03
CDT1-202ENST00000562747 TRMT5Q32P41 509 aaKnown RBP14.84□□□□□ -0.03
CDT1-202ENST00000562747 MMEL1Q495T6 779 aa14.84□□□□□ -0.03
CDT1-202ENST00000562747 REEP3Q6NUK4 255 aa14.84□□□□□ -0.03
CDT1-202ENST00000562747 GRINAQ7Z429 371 aa14.84□□□□□ -0.03
CDT1-202ENST00000562747 GCNT2Q8N0V5 402 aa14.84□□□□□ -0.03
CDT1-202ENST00000562747 NFKBIDQ8NI38 313 aa14.84□□□□□ -0.03
CDT1-202ENST00000562747 NINJ1Q92982 152 aa14.84□□□□□ -0.03
CDT1-202ENST00000562747 CCDC106Q9BWC9 280 aa14.84□□□□□ -0.03
CDT1-202ENST00000562747 SPATA9Q9BWV2 254 aa14.84□□□□□ -0.03
CDT1-202ENST00000562747 NSRP1Q9H0G5 558 aaKnown RBP14.84□□□□□ -0.03
CDT1-202ENST00000562747 PIGMQ9H3S5 423 aa14.84□□□□□ -0.03
CDT1-202ENST00000562747 GSX1Q9H4S2 264 aaPredicted RBP14.84□□□□□ -0.03
CDT1-202ENST00000562747 TIGARQ9NQ88 270 aa14.84□□□□□ -0.03
CDT1-202ENST00000562747 JKAMPQ9P055 326 aa14.84□□□□□ -0.03
CDT1-202ENST00000562747 ST6GALNAC2Q9UJ37 374 aa14.84□□□□□ -0.03
CDT1-202ENST00000562747 FOXD3Q9UJU5 478 aaPredicted RBP14.84□□□□□ -0.03
CDT1-202ENST00000562747 CAPN7Q9Y6W3 813 aa14.84□□□□□ -0.03
CDT1-202ENST00000562747 FLNAP21333 2647 aaKnown RBP14.84□□□□□ -0.03
CDT1-202ENST00000562747 MED12LQ86YW9 2145 aa14.83□□□□□ -0.04
CDT1-202ENST00000562747 A0A1W2PNV4 684 aa14.83□□□□□ -0.04
CDT1-202ENST00000562747 FAM221AA4D161 298 aa14.83□□□□□ -0.04
CDT1-202ENST00000562747 SYT5O00445 386 aa14.83□□□□□ -0.04
CDT1-202ENST00000562747 CXCL13O43927 109 aa14.83□□□□□ -0.04
CDT1-202ENST00000562747 CCDC22O60826 627 aa14.83□□□□□ -0.04
CDT1-202ENST00000562747 ADAM11O75078 769 aa14.83□□□□□ -0.04
CDT1-202ENST00000562747 SLC6A2P23975 617 aa14.83□□□□□ -0.04
CDT1-202ENST00000562747 FKBP2P26885 142 aaKnown RBP14.83□□□□□ -0.04
CDT1-202ENST00000562747 HTR3AP46098 478 aa14.83□□□□□ -0.04
CDT1-202ENST00000562747 IDH2P48735 452 aaKnown RBP14.83□□□□□ -0.04
CDT1-202ENST00000562747 AGFG1P52594 562 aaKnown RBP14.83□□□□□ -0.04
CDT1-202ENST00000562747 CARD18P57730 90 aa14.83□□□□□ -0.04
CDT1-202ENST00000562747 RBBP4Q09028 425 aa14.83□□□□□ -0.04
CDT1-202ENST00000562747 EPS8Q12929 822 aa14.83□□□□□ -0.04
CDT1-202ENST00000562747 CYLC2Q14093 348 aaPredicted RBP14.83□□□□□ -0.04
CDT1-202ENST00000562747 SCARB2Q14108 478 aa14.83□□□□□ -0.04
CDT1-202ENST00000562747 TMEM176BQ3YBM2 270 aaPredicted RBP14.83□□□□□ -0.04
CDT1-202ENST00000562747 ZNF311Q5JNZ3 666 aa14.83□□□□□ -0.04
CDT1-202ENST00000562747 ZNF550Q7Z398 422 aa14.83□□□□□ -0.04
CDT1-202ENST00000562747 SPATA21Q7Z572 469 aa14.83□□□□□ -0.04
CDT1-202ENST00000562747 KRT73Q86Y46 540 aa14.83□□□□□ -0.04
CDT1-202ENST00000562747 HIPK4Q8NE63 616 aa14.83□□□□□ -0.04
CDT1-202ENST00000562747 SLC25A43Q8WUT9 341 aaPredicted RBP14.83□□□□□ -0.04
CDT1-202ENST00000562747 OSTF1Q92882 214 aa14.83□□□□□ -0.04
CDT1-202ENST00000562747 SLC35B4Q969S0 331 aa14.83□□□□□ -0.04
CDT1-202ENST00000562747 CPNE4Q96A23 557 aaPredicted RBP14.83□□□□□ -0.04
CDT1-202ENST00000562747 SPATA5L1Q9BVQ7 753 aa14.83□□□□□ -0.04
CDT1-202ENST00000562747 POLDIP3Q9BY77 421 aaKnown RBP14.83□□□□□ -0.04
CDT1-202ENST00000562747 PRRG4Q9BZD6 226 aa14.83□□□□□ -0.04
CDT1-202ENST00000562747 DLL4Q9NR61 685 aa14.83□□□□□ -0.04
CDT1-202ENST00000562747 RLIMQ9NVW2 624 aa14.83□□□□□ -0.04
CDT1-202ENST00000562747 PLEKHA6Q9Y2H5 1048 aa14.83□□□□□ -0.04
CDT1-202ENST00000562747 SPIN1Q9Y657 262 aaPredicted RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms