RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 ENPP6Q6UWR7 440 aa8.81□□□□□ -1
CLK3-208ENST00000562626 CLEC18BQ6UXF7 455 aa8.81□□□□□ -1
CLK3-208ENST00000562626 CBLL1Q75N03 491 aa8.81□□□□□ -1
CLK3-208ENST00000562626 FJX1Q86VR8 437 aa8.81□□□□□ -1
CLK3-208ENST00000562626 KRT73Q86Y46 540 aa8.81□□□□□ -1
CLK3-208ENST00000562626 ULK2Q8IYT8 1036 aa8.81□□□□□ -1
CLK3-208ENST00000562626 CADM2Q8N3J6 435 aa8.81□□□□□ -1
CLK3-208ENST00000562626 CLEC18CQ8NCF0 446 aa8.81□□□□□ -1
CLK3-208ENST00000562626 ATP6V1C2Q8NEY4 427 aa8.81□□□□□ -1
CLK3-208ENST00000562626 PHF10Q8WUB8 498 aaKnown RBP8.81□□□□□ -1
CLK3-208ENST00000562626 ST8SIA1Q92185 356 aa8.81□□□□□ -1
CLK3-208ENST00000562626 C3orf49Q96BT1 292 aa8.81□□□□□ -1
CLK3-208ENST00000562626 SARAFQ96BY9 339 aa8.81□□□□□ -1
CLK3-208ENST00000562626 TPD52L3Q96J77 140 aa8.81□□□□□ -1
CLK3-208ENST00000562626 DMRTA2Q96SC8 542 aa8.81□□□□□ -1
CLK3-208ENST00000562626 SPATA5L1Q9BVQ7 753 aa8.81□□□□□ -1
CLK3-208ENST00000562626 OR11A1Q9GZK7 315 aa8.81□□□□□ -1
CLK3-208ENST00000562626 ADAM19Q9H013 955 aa8.81□□□□□ -1
CLK3-208ENST00000562626 OSGIN1Q9UJX0 560 aa8.81□□□□□ -1
CLK3-208ENST00000562626 ACAD8Q9UKU7 415 aa8.81□□□□□ -1
CLK3-208ENST00000562626 ZNF232Q9UNY5 417 aa8.81□□□□□ -1
CLK3-208ENST00000562626 ICE1Q9Y2F5 2266 aa8.8□□□□□ -1
CLK3-208ENST00000562626 TMED7-TICAM2A0A0A6YYA0 188 aa8.8□□□□□ -1
CLK3-208ENST00000562626 A0A1B0GWA3 101 aa8.8□□□□□ -1
CLK3-208ENST00000562626 A0A1W2PNR3 127 aa8.8□□□□□ -1
CLK3-208ENST00000562626 SYT5O00445 386 aa8.8□□□□□ -1
CLK3-208ENST00000562626 TNFSF11O14788 317 aa8.8□□□□□ -1
CLK3-208ENST00000562626 LRRTM2O43300 516 aa8.8□□□□□ -1
CLK3-208ENST00000562626 TOXO94900 526 aa8.8□□□□□ -1
CLK3-208ENST00000562626 TGM6O95932 706 aa8.8□□□□□ -1
CLK3-208ENST00000562626 GP1BBP13224 206 aa8.8□□□□□ -1
CLK3-208ENST00000562626 CPN1P15169 458 aa8.8□□□□□ -1
CLK3-208ENST00000562626 POU3F2P20265 443 aaPredicted RBP8.8□□□□□ -1
CLK3-208ENST00000562626 ADORA2A-AS1P86434 159 aa8.8□□□□□ -1
CLK3-208ENST00000562626 MERTKQ12866 999 aa8.8□□□□□ -1
CLK3-208ENST00000562626 ACSF3Q4G176 576 aaPredicted RBP8.8□□□□□ -1
CLK3-208ENST00000562626 SAMD4BQ5PRF9 694 aaKnown RBP8.8□□□□□ -1
CLK3-208ENST00000562626 PGM2L1Q6PCE3 622 aa8.8□□□□□ -1
CLK3-208ENST00000562626 RPTNQ6XPR3 784 aa8.8□□□□□ -1
CLK3-208ENST00000562626 WDR88Q6ZMY6 472 aa8.8□□□□□ -1
CLK3-208ENST00000562626 ZNF550Q7Z398 422 aa8.8□□□□□ -1
CLK3-208ENST00000562626 ADGRE4PQ86SQ3 457 aa8.8□□□□□ -1
CLK3-208ENST00000562626 CARM1Q86X55 608 aa8.8□□□□□ -1
CLK3-208ENST00000562626 P3H2Q8IVL5 708 aa8.8□□□□□ -1
CLK3-208ENST00000562626 LILRA2Q8N149 483 aa8.8□□□□□ -1
CLK3-208ENST00000562626 NAXEQ8NCW5 288 aa8.8□□□□□ -1
CLK3-208ENST00000562626 ZNF563Q8TA94 476 aa8.8□□□□□ -1
CLK3-208ENST00000562626 SLC26A7Q8TE54 656 aa8.8□□□□□ -1
CLK3-208ENST00000562626 FAM162AQ96A26 154 aa8.8□□□□□ -1
CLK3-208ENST00000562626 HSH2DQ96JZ2 352 aa8.8□□□□□ -1
CLK3-208ENST00000562626 ARL5BQ96KC2 179 aa8.8□□□□□ -1
CLK3-208ENST00000562626 MRGPRX4Q96LA9 322 aa8.8□□□□□ -1
CLK3-208ENST00000562626 PIGQQ9BRB3 760 aa8.8□□□□□ -1
CLK3-208ENST00000562626 THTPAQ9BU02 230 aa8.8□□□□□ -1
CLK3-208ENST00000562626 CADM1Q9BY67 442 aaKnown RBP8.8□□□□□ -1
CLK3-208ENST00000562626 SRXN1Q9BYN0 137 aa8.8□□□□□ -1
CLK3-208ENST00000562626 C1orf21Q9H246 121 aa8.8□□□□□ -1
CLK3-208ENST00000562626 ALKBH4Q9NXW9 302 aa8.8□□□□□ -1
CLK3-208ENST00000562626 AP3M1Q9Y2T2 418 aa8.8□□□□□ -1
CLK3-208ENST00000562626 MEMO1Q9Y316 297 aa8.8□□□□□ -1
CLK3-208ENST00000562626 SH3GLB1Q9Y371 365 aa8.8□□□□□ -1
CLK3-208ENST00000562626 TMED7Q9Y3B3 224 aa8.8□□□□□ -1
CLK3-208ENST00000562626 V9GYQ6 96 aa8.8□□□□□ -1
CLK3-208ENST00000562626 ALPK2Q86TB3 2170 aa8.8□□□□□ -1
CLK3-208ENST00000562626 ABCA12Q86UK0 2595 aa8.8□□□□□ -1
CLK3-208ENST00000562626 PRR14LQ5THK1 2151 aa8.79□□□□□ -1
CLK3-208ENST00000562626 IGKV1D-42A0A075B6H8 117 aa8.79□□□□□ -1
CLK3-208ENST00000562626 A0A0B4J2E0 115 aa8.79□□□□□ -1
CLK3-208ENST00000562626 A0A1B0GX12 115 aa8.79□□□□□ -1
CLK3-208ENST00000562626 TCRBV5S2A0A599 114 aa8.79□□□□□ -1
CLK3-208ENST00000562626 CPSF4LA6NMK7 179 aaKnown RBP8.79□□□□□ -1
CLK3-208ENST00000562626 CLCA1A8K7I4 914 aa8.79□□□□□ -1
CLK3-208ENST00000562626 ZNF814B7Z6K7 855 aa8.79□□□□□ -1
CLK3-208ENST00000562626 FAM47E-STBD1D6RA91 191 aa8.79□□□□□ -1
CLK3-208ENST00000562626 H0Y3Z8 333 aa8.79□□□□□ -1
CLK3-208ENST00000562626 J3KTA2 159 aa8.79□□□□□ -1
CLK3-208ENST00000562626 CCL21O00585 134 aa8.79□□□□□ -1
CLK3-208ENST00000562626 EIF1AYO14602 144 aaKnown RBP8.79□□□□□ -1
CLK3-208ENST00000562626 BCKDKO14874 412 aa8.79□□□□□ -1
CLK3-208ENST00000562626 GSTA4O15217 222 aa8.79□□□□□ -1
CLK3-208ENST00000562626 GSC2O15499 205 aa8.79□□□□□ -1
CLK3-208ENST00000562626 ZNF682O95780 498 aa8.79□□□□□ -1
CLK3-208ENST00000562626 SEMG1P04279 462 aa8.79□□□□□ -1
CLK3-208ENST00000562626 C8BP07358 591 aa8.79□□□□□ -1
CLK3-208ENST00000562626 GLI4P10075 376 aa8.79□□□□□ -1
CLK3-208ENST00000562626 ACVR2AP27037 513 aa8.79□□□□□ -1
CLK3-208ENST00000562626 ADH6P28332 368 aa8.79□□□□□ -1
CLK3-208ENST00000562626 SLC1A3P43003 542 aa8.79□□□□□ -1
CLK3-208ENST00000562626 SLC6A8P48029 635 aa8.79□□□□□ -1
CLK3-208ENST00000562626 MNAT1P51948 309 aa8.79□□□□□ -1
CLK3-208ENST00000562626 RIPPLY3P57055 190 aa8.79□□□□□ -1
CLK3-208ENST00000562626 NUP107P57740 925 aa8.79□□□□□ -1
CLK3-208ENST00000562626 RAC1P63000 192 aa8.79□□□□□ -1
CLK3-208ENST00000562626 SELENOWP63302 87 aa8.79□□□□□ -1
CLK3-208ENST00000562626 EGR4Q05215 589 aa8.79□□□□□ -1
CLK3-208ENST00000562626 RBPJQ06330 500 aa8.79□□□□□ -1
CLK3-208ENST00000562626 OR1Q1Q15612 314 aa8.79□□□□□ -1
CLK3-208ENST00000562626 TMEM176BQ3YBM2 270 aaPredicted RBP8.79□□□□□ -1
CLK3-208ENST00000562626 C4orf17Q53FE4 359 aa8.79□□□□□ -1
CLK3-208ENST00000562626 ENTPD8Q5MY95 495 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms