RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 SHC1P29353 583 aa12.07□□□□□ -0.48
CDH1-204ENST00000562118 AQP1P29972 269 aa12.07□□□□□ -0.48
CDH1-204ENST00000562118 KDELR2P33947 212 aa12.07□□□□□ -0.48
CDH1-204ENST00000562118 HTR3AP46098 478 aa12.07□□□□□ -0.48
CDH1-204ENST00000562118 PER3P56645 1201 aa12.07□□□□□ -0.48
CDH1-204ENST00000562118 NPTX1Q15818 432 aa12.07□□□□□ -0.48
CDH1-204ENST00000562118 WBP2NLQ6ICG8 309 aa12.07□□□□□ -0.48
CDH1-204ENST00000562118 TMEM211Q6ICI0 200 aa12.07□□□□□ -0.48
CDH1-204ENST00000562118 C3orf33Q6P1S2 294 aa12.07□□□□□ -0.48
CDH1-204ENST00000562118 POMZP3Q6PJE2 187 aa12.07□□□□□ -0.48
CDH1-204ENST00000562118 ADGRG3Q86Y34 549 aa12.07□□□□□ -0.48
CDH1-204ENST00000562118 INTS1Q8N201 2190 aaKnown RBP12.07□□□□□ -0.48
CDH1-204ENST00000562118 OR52E4Q8NGH9 312 aa12.07□□□□□ -0.48
CDH1-204ENST00000562118 SSC4DQ8WTU2 575 aa12.07□□□□□ -0.48
CDH1-204ENST00000562118 SLC25A43Q8WUT9 341 aaPredicted RBP12.07□□□□□ -0.48
CDH1-204ENST00000562118 C3orf49Q96BT1 292 aa12.07□□□□□ -0.48
CDH1-204ENST00000562118 PAQR5Q9NXK6 330 aaPredicted RBP12.07□□□□□ -0.48
CDH1-204ENST00000562118 TESQ9UGI8 421 aaKnown RBP12.07□□□□□ -0.48
CDH1-204ENST00000562118 CHRNA9Q9UGM1 479 aa12.07□□□□□ -0.48
CDH1-204ENST00000562118 OSGIN1Q9UJX0 560 aa12.07□□□□□ -0.48
CDH1-204ENST00000562118 CAMK2AQ9UQM7 478 aa12.07□□□□□ -0.48
CDH1-204ENST00000562118 ZNF175Q9Y473 711 aa12.07□□□□□ -0.48
CDH1-204ENST00000562118 SPTBN1Q01082 2364 aaKnown RBP12.07□□□□□ -0.48
CDH1-204ENST00000562118 A0A0J9YW62 118 aa12.06□□□□□ -0.48
CDH1-204ENST00000562118 CLCA1A8K7I4 914 aa12.06□□□□□ -0.48
CDH1-204ENST00000562118 H0YC42 278 aa12.06□□□□□ -0.48
CDH1-204ENST00000562118 H3BML4 177 aa12.06□□□□□ -0.48
CDH1-204ENST00000562118 NPIPB7O75200 414 aa12.06□□□□□ -0.48
CDH1-204ENST00000562118 NUDT14O95848 222 aa12.06□□□□□ -0.48
CDH1-204ENST00000562118 GKN3PP0CG01 181 aa12.06□□□□□ -0.48
CDH1-204ENST00000562118 UQCRBP14927 111 aa12.06□□□□□ -0.48
CDH1-204ENST00000562118 GGT1P19440 569 aa12.06□□□□□ -0.48
CDH1-204ENST00000562118 IDH2P48735 452 aaKnown RBP12.06□□□□□ -0.48
CDH1-204ENST00000562118 CLK1P49759 484 aaKnown RBP12.06□□□□□ -0.48
CDH1-204ENST00000562118 CCR4P51679 360 aa12.06□□□□□ -0.48
CDH1-204ENST00000562118 POLR2HP52434 150 aaKnown RBP12.06□□□□□ -0.48
CDH1-204ENST00000562118 TPD52P55327 224 aaPredicted RBP12.06□□□□□ -0.48
CDH1-204ENST00000562118 NUP107P57740 925 aa12.06□□□□□ -0.48
CDH1-204ENST00000562118 SLC25A3Q00325 362 aa12.06□□□□□ -0.48
CDH1-204ENST00000562118 ZNF585AQ6P3V2 769 aa12.06□□□□□ -0.48
CDH1-204ENST00000562118 ATG4DQ86TL0 474 aaPredicted RBP12.06□□□□□ -0.48
CDH1-204ENST00000562118 LILRA2Q8N149 483 aa12.06□□□□□ -0.48
CDH1-204ENST00000562118 ARHGAP24Q8N264 748 aa12.06□□□□□ -0.48
CDH1-204ENST00000562118 MEIOBQ8N635 442 aa12.06□□□□□ -0.48
CDH1-204ENST00000562118 RBM15BQ8NDT2 890 aaKnown RBP12.06□□□□□ -0.48
CDH1-204ENST00000562118 OR4D11Q8NGI4 311 aa12.06□□□□□ -0.48
CDH1-204ENST00000562118 WNT2BQ93097 391 aa12.06□□□□□ -0.48
CDH1-204ENST00000562118 KLHL15Q96M94 604 aa12.06□□□□□ -0.48
CDH1-204ENST00000562118 ZFP3Q96NJ6 502 aa12.06□□□□□ -0.48
CDH1-204ENST00000562118 PIF1Q9H611 641 aa12.06□□□□□ -0.48
CDH1-204ENST00000562118 CACYBPQ9HB71 228 aaKnown RBP12.06□□□□□ -0.48
CDH1-204ENST00000562118 CTPS2Q9NRF8 586 aa12.06□□□□□ -0.48
CDH1-204ENST00000562118 STOML1Q9UBI4 398 aa12.06□□□□□ -0.48
CDH1-204ENST00000562118 HCFC1P51610 2035 aa12.05□□□□□ -0.48
CDH1-204ENST00000562118 A0A0B4J2E0 115 aa12.05□□□□□ -0.48
CDH1-204ENST00000562118 A0A1B0GX12 115 aa12.05□□□□□ -0.48
CDH1-204ENST00000562118 GJE1A6NN92 205 aa12.05□□□□□ -0.48
CDH1-204ENST00000562118 H0Y3Z8 333 aa12.05□□□□□ -0.48
CDH1-204ENST00000562118 FRS3O43559 492 aa12.05□□□□□ -0.48
CDH1-204ENST00000562118 DNPH1O43598 174 aa12.05□□□□□ -0.48
CDH1-204ENST00000562118 CYP7B1O75881 506 aa12.05□□□□□ -0.48
CDH1-204ENST00000562118 RCBTB2O95199 551 aa12.05□□□□□ -0.48
CDH1-204ENST00000562118 OPN1SWP03999 348 aa12.05□□□□□ -0.48
CDH1-204ENST00000562118 FESP07332 822 aa12.05□□□□□ -0.48
CDH1-204ENST00000562118 ESRRAP11474 423 aaPredicted RBP12.05□□□□□ -0.48
CDH1-204ENST00000562118 GP1BBP13224 206 aa12.05□□□□□ -0.48
CDH1-204ENST00000562118 TCEA1P23193 301 aaKnown RBP12.05□□□□□ -0.48
CDH1-204ENST00000562118 MERTKQ12866 999 aa12.05□□□□□ -0.48
CDH1-204ENST00000562118 SAMD4BQ5PRF9 694 aaKnown RBP12.05□□□□□ -0.48
CDH1-204ENST00000562118 SWT1Q5T5J6 900 aaKnown RBP12.05□□□□□ -0.48
CDH1-204ENST00000562118 C16orf89Q6UX73 402 aa12.05□□□□□ -0.48
CDH1-204ENST00000562118 C3P1Q6ZMU1 363 aa12.05□□□□□ -0.48
CDH1-204ENST00000562118 NCCRP1Q6ZVX7 275 aaPredicted RBP12.05□□□□□ -0.48
CDH1-204ENST00000562118 CBLL1Q75N03 491 aa12.05□□□□□ -0.48
CDH1-204ENST00000562118 TSPYL5Q86VY4 417 aaPredicted RBP12.05□□□□□ -0.48
CDH1-204ENST00000562118 ZNF808Q8N4W9 903 aaPredicted RBP12.05□□□□□ -0.48
CDH1-204ENST00000562118 SMYD1Q8NB12 490 aa12.05□□□□□ -0.48
CDH1-204ENST00000562118 ACBD4Q8NC06 268 aa12.05□□□□□ -0.48
CDH1-204ENST00000562118 NAXEQ8NCW5 288 aa12.05□□□□□ -0.48
CDH1-204ENST00000562118 OR10D3Q8NH80 312 aa12.05□□□□□ -0.48
CDH1-204ENST00000562118 OR2V1Q8NHB1 315 aa12.05□□□□□ -0.48
CDH1-204ENST00000562118 PSMG3-AS1Q96PY0 264 aa12.05□□□□□ -0.48
CDH1-204ENST00000562118 GORASP2Q9H8Y8 452 aa12.05□□□□□ -0.48
CDH1-204ENST00000562118 RNF122Q9H9V4 155 aa12.05□□□□□ -0.48
CDH1-204ENST00000562118 DOPEY2Q9Y3R5 2298 aa12.05□□□□□ -0.48
CDH1-204ENST00000562118 A0A0G2JNJ9 132 aa12.04□□□□□ -0.48
CDH1-204ENST00000562118 CXCR6O00574 342 aa12.04□□□□□ -0.48
CDH1-204ENST00000562118 ZG16O60844 167 aa12.04□□□□□ -0.48
CDH1-204ENST00000562118 UBOX5O94941 541 aa12.04□□□□□ -0.48
CDH1-204ENST00000562118 LYPD3O95274 346 aa12.04□□□□□ -0.48
CDH1-204ENST00000562118 PMS2P2O95744 297 aa12.04□□□□□ -0.48
CDH1-204ENST00000562118 TGM6O95932 706 aa12.04□□□□□ -0.48
CDH1-204ENST00000562118 ME2P23368 584 aa12.04□□□□□ -0.48
CDH1-204ENST00000562118 TACR3P29371 465 aa12.04□□□□□ -0.48
CDH1-204ENST00000562118 RYKP34925 604 aa12.04□□□□□ -0.48
CDH1-204ENST00000562118 RAC3P60763 192 aa12.04□□□□□ -0.48
CDH1-204ENST00000562118 SELENOWP63302 87 aa12.04□□□□□ -0.48
CDH1-204ENST00000562118 SYT14P1Q58G82 188 aa12.04□□□□□ -0.48
CDH1-204ENST00000562118 XKRXQ6PP77 449 aa12.04□□□□□ -0.48
CDH1-204ENST00000562118 LINC00114Q6XXX2 140 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms