RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 CROCCQ5TZA2 2017 aa4.63□□□□□ -1.67
SMG1-204ENST00000561940 TMEM94Q12767 1356 aa4.63□□□□□ -1.67
SMG1-204ENST00000561940 BLMP54132 1417 aaPredicted RBP4.63□□□□□ -1.67
SMG1-204ENST00000561940 PTCH1Q13635 1447 aa4.63□□□□□ -1.67
SMG1-204ENST00000561940 FAM135AQ9P2D6 1515 aa4.62□□□□□ -1.67
SMG1-204ENST00000561940 NEURL4Q96JN8 1562 aa4.62□□□□□ -1.67
SMG1-204ENST00000561940 LRP6O75581 1613 aa4.62□□□□□ -1.67
SMG1-204ENST00000561940 ZNF142P52746 1687 aaPredicted RBP4.62□□□□□ -1.67
SMG1-204ENST00000561940 A0A1W2PNV4 684 aa4.62□□□□□ -1.67
SMG1-204ENST00000561940 CLRN2A0PK11 232 aa4.62□□□□□ -1.67
SMG1-204ENST00000561940 KIF2AO00139 706 aaPredicted RBP4.62□□□□□ -1.67
SMG1-204ENST00000561940 MPHOSPH10O00566 681 aaKnown RBP4.62□□□□□ -1.67
SMG1-204ENST00000561940 TPST2O60704 377 aa4.62□□□□□ -1.67
SMG1-204ENST00000561940 H2BFMP0C1H6 154 aa4.62□□□□□ -1.67
SMG1-204ENST00000561940 VDAC1P21796 283 aa4.62□□□□□ -1.67
SMG1-204ENST00000561940 C1orf61Q13536 156 aa4.62□□□□□ -1.67
SMG1-204ENST00000561940 SBK1Q52WX2 424 aa4.62□□□□□ -1.67
SMG1-204ENST00000561940 TMEM225Q6GV28 225 aa4.62□□□□□ -1.67
SMG1-204ENST00000561940 CCDC80Q76M96 950 aa4.62□□□□□ -1.67
SMG1-204ENST00000561940 TMEM110Q86TL2 294 aa4.62□□□□□ -1.67
SMG1-204ENST00000561940 LINC00612Q8N6U2 182 aa4.62□□□□□ -1.67
SMG1-204ENST00000561940 OR10A7Q8NGE5 316 aa4.62□□□□□ -1.67
SMG1-204ENST00000561940 OR13F1Q8NGS4 319 aa4.62□□□□□ -1.67
SMG1-204ENST00000561940 ZNF606Q8WXB4 792 aa4.62□□□□□ -1.67
SMG1-204ENST00000561940 MS4A14Q96JA4 679 aa4.62□□□□□ -1.67
SMG1-204ENST00000561940 C7orf34Q96L11 122 aa4.62□□□□□ -1.67
SMG1-204ENST00000561940 CHIAQ9BZP6 476 aa4.62□□□□□ -1.67
SMG1-204ENST00000561940 NT5C3AQ9H0P0 336 aa4.62□□□□□ -1.67
SMG1-204ENST00000561940 VCX2Q9H322 139 aa4.62□□□□□ -1.67
SMG1-204ENST00000561940 APMAPQ9HDC9 416 aa4.62□□□□□ -1.67
SMG1-204ENST00000561940 AIPL1Q9NZN9 384 aa4.62□□□□□ -1.67
SMG1-204ENST00000561940 OR1A1Q9P1Q5 309 aa4.62□□□□□ -1.67
SMG1-204ENST00000561940 RPH3ALQ9UNE2 315 aa4.62□□□□□ -1.67
SMG1-204ENST00000561940 FRMPD3Q5JV73 1810 aa4.62□□□□□ -1.67
SMG1-204ENST00000561940 MIA2Q96PC5 1412 aa4.62□□□□□ -1.67
SMG1-204ENST00000561940 DNMT1P26358 1616 aaKnown RBP4.61□□□□□ -1.67
SMG1-204ENST00000561940 IGLV8-61A0A075B6I0 122 aa4.61□□□□□ -1.67
SMG1-204ENST00000561940 IGHV2-70DA0A0C4DH43 119 aa4.61□□□□□ -1.67
SMG1-204ENST00000561940 FAM168BA1KXE4 195 aa4.61□□□□□ -1.67
SMG1-204ENST00000561940 DHRS7CA6NNS2 312 aa4.61□□□□□ -1.67
SMG1-204ENST00000561940 NPIPA7E9PJI5 369 aa4.61□□□□□ -1.67
SMG1-204ENST00000561940 TAPBPO15533 448 aa4.61□□□□□ -1.67
SMG1-204ENST00000561940 NPIPA8P0DM63 369 aa4.61□□□□□ -1.67
SMG1-204ENST00000561940 MEOX2P50222 304 aa4.61□□□□□ -1.67
SMG1-204ENST00000561940 SLC25A52Q3SY17 297 aa4.61□□□□□ -1.67
SMG1-204ENST00000561940 UTF1Q5T230 341 aa4.61□□□□□ -1.67
SMG1-204ENST00000561940 BAIAP2L2Q6UXY1 529 aa4.61□□□□□ -1.67
SMG1-204ENST00000561940 DEFB132Q7Z7B7 95 aa4.61□□□□□ -1.67
SMG1-204ENST00000561940 TPRA1Q86W33 373 aa4.61□□□□□ -1.67
SMG1-204ENST00000561940 FBXO16Q8IX29 292 aaPredicted RBP4.61□□□□□ -1.67
SMG1-204ENST00000561940 ZNF679Q8IYX0 411 aa4.61□□□□□ -1.67
SMG1-204ENST00000561940 ZCCHC7Q8N3Z6 543 aaKnown RBP4.61□□□□□ -1.67
SMG1-204ENST00000561940 CATSPER1Q8NEC5 780 aa4.61□□□□□ -1.67
SMG1-204ENST00000561940 OR4D9Q8NGE8 314 aa4.61□□□□□ -1.67
SMG1-204ENST00000561940 OR2A12Q8NGT7 310 aa4.61□□□□□ -1.67
SMG1-204ENST00000561940 PAQR8Q8TEZ7 354 aa4.61□□□□□ -1.67
SMG1-204ENST00000561940 SLC25A38Q96DW6 304 aa4.61□□□□□ -1.67
SMG1-204ENST00000561940 SECISBP2Q96T21 854 aaKnown RBP4.61□□□□□ -1.67
SMG1-204ENST00000561940 NPAS2Q99743 824 aa4.61□□□□□ -1.67
SMG1-204ENST00000561940 ZNF275Q9NSD4 429 aaPredicted RBP4.61□□□□□ -1.67
SMG1-204ENST00000561940 SMOXQ9NWM0 555 aa4.61□□□□□ -1.67
SMG1-204ENST00000561940 NPIPA1Q9UND3 350 aa4.61□□□□□ -1.67
SMG1-204ENST00000561940 MOKQ9UQ07 419 aa4.61□□□□□ -1.67
SMG1-204ENST00000561940 RASD1Q9Y272 281 aa4.61□□□□□ -1.67
SMG1-204ENST00000561940 AK6Q9Y3D8 172 aaKnown RBP4.61□□□□□ -1.67
SMG1-204ENST00000561940 FLVCR1Q9Y5Y0 555 aa4.61□□□□□ -1.67
SMG1-204ENST00000561940 DDX49Q9Y6V7 483 aaKnown RBP4.61□□□□□ -1.67
SMG1-204ENST00000561940 MSH6P52701 1360 aa4.61□□□□□ -1.67
SMG1-204ENST00000561940 SYNMO15061 1565 aa4.61□□□□□ -1.67
SMG1-204ENST00000561940 KDM5CP41229 1560 aa4.61□□□□□ -1.67
SMG1-204ENST00000561940 MROH2AA6NES4 1674 aa4.61□□□□□ -1.67
SMG1-204ENST00000561940 KLF18A0A0U1RQI7 1052 aa4.6□□□□□ -1.67
SMG1-204ENST00000561940 SULT2B1O00204 365 aa4.6□□□□□ -1.67
SMG1-204ENST00000561940 CXCL11O14625 94 aa4.6□□□□□ -1.67
SMG1-204ENST00000561940 PRKYO43930 277 aa4.6□□□□□ -1.67
SMG1-204ENST00000561940 CABYRO75952 493 aa4.6□□□□□ -1.67
SMG1-204ENST00000561940 PNMTP11086 282 aa4.6□□□□□ -1.67
SMG1-204ENST00000561940 ZNF44P15621 663 aa4.6□□□□□ -1.67
SMG1-204ENST00000561940 EPHX2P34913 555 aa4.6□□□□□ -1.67
SMG1-204ENST00000561940 GCKP35557 465 aa4.6□□□□□ -1.67
SMG1-204ENST00000561940 CASP4P49662 377 aa4.6□□□□□ -1.67
SMG1-204ENST00000561940 PRKXP51817 358 aa4.6□□□□□ -1.67
SMG1-204ENST00000561940 RIPK4P57078 832 aa4.6□□□□□ -1.67
SMG1-204ENST00000561940 SPATA46Q5T0L3 261 aa4.6□□□□□ -1.67
SMG1-204ENST00000561940 LIPNQ5VXI9 398 aa4.6□□□□□ -1.67
SMG1-204ENST00000561940 TPGS2Q68CL5 300 aa4.6□□□□□ -1.67
SMG1-204ENST00000561940 OR5M10Q6IEU7 315 aa4.6□□□□□ -1.67
SMG1-204ENST00000561940 UBQLNLQ8IYU4 475 aa4.6□□□□□ -1.67
SMG1-204ENST00000561940 FBXL16Q8N461 479 aa4.6□□□□□ -1.67
SMG1-204ENST00000561940 DHRSXQ8N5I4 330 aa4.6□□□□□ -1.67
SMG1-204ENST00000561940 ZNF525Q8N782 197 aa4.6□□□□□ -1.67
SMG1-204ENST00000561940 OR8J1Q8NGP2 316 aa4.6□□□□□ -1.67
SMG1-204ENST00000561940 C19orf24Q9BVV8 132 aa4.6□□□□□ -1.67
SMG1-204ENST00000561940 SPATA16Q9BXB7 569 aa4.6□□□□□ -1.67
SMG1-204ENST00000561940 FANCFQ9NPI8 374 aa4.6□□□□□ -1.67
SMG1-204ENST00000561940 B3GNT2Q9NY97 397 aa4.6□□□□□ -1.67
SMG1-204ENST00000561940 APOBEC3BQ9UH17 382 aaKnown RBP4.6□□□□□ -1.67
SMG1-204ENST00000561940 NLRP1Q9C000 1473 aa4.6□□□□□ -1.67
SMG1-204ENST00000561940 ABCC1P33527 1531 aa4.6□□□□□ -1.67
SMG1-204ENST00000561940 DEPDC5O75140 1603 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms