RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 IL5RAQ01344 420 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 COX10Q12887 443 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 KLRB1Q12918 225 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 SKP2Q13309 424 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 PCOLCEQ15113 449 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 CD226Q15762 336 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 MEP1AQ16819 746 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 CTU2Q2VPK5 515 aaKnown RBP6.88□□□□□ -1.31
TPM1-231ENST00000561395 FAM69BQ5VUD6 431 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 LAIR2Q6ISS4 152 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 C1orf94Q6P1W5 598 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 C6orf15Q6UXA7 325 aaPredicted RBP6.88□□□□□ -1.31
TPM1-231ENST00000561395 MBOAT2Q6ZWT7 520 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 APLFQ8IW19 511 aaPredicted RBP6.88□□□□□ -1.31
TPM1-231ENST00000561395 ZNF440Q8IYI8 595 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 LSMEM1Q8N8F7 131 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 TSPAN14Q8NG11 270 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 GNPDA2Q8TDQ7 276 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 TMEM255BQ8WV15 326 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 C8orf44Q96CB5 159 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 ABHD17AQ96GS6 310 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 ADOQ96SZ5 270 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 GPA33Q99795 319 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 PRSS27Q9BQR3 290 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 SPRY4Q9C004 299 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 TRIM2Q9C040 744 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 ZNF700Q9H0M5 742 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 TMEM27Q9HBJ8 222 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 EXOSC3Q9NQT5 275 aaKnown RBP6.88□□□□□ -1.31
TPM1-231ENST00000561395 TP53TG5Q9Y2B4 290 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 PTRH2Q9Y3E5 179 aaKnown RBP6.88□□□□□ -1.31
TPM1-231ENST00000561395 HIVEP1P15822 2718 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 PCNX1Q96RV3 2341 aa6.88□□□□□ -1.31
TPM1-231ENST00000561395 NAV3Q8IVL0 2385 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 A0A087WXM4 84 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 IGHV1-45A0A0A0MS14 117 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 A0A1B0GWA3 101 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 A0A1W2PQ72 361 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 A0A1W2PQD3 144 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 DPPA5A6NC42 116 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 A6NHS1 94 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 OR6C70A6NIJ9 312 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 TMEM200CA6NKL6 621 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 TRIM64CA6NLI5 447 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 ALG1L2C9J202 215 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 SLC1A7O00341 560 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 KLF4O43474 513 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 OIP5O43482 229 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 CHP2O43745 196 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 PIP5K1CO60331 668 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 ADAM11O75078 769 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 PPM1BO75688 479 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 SOX14O95416 240 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 NADKO95544 446 aaPredicted RBP6.87□□□□□ -1.31
TPM1-231ENST00000561395 CLDN1O95832 211 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 CLPTM1O96005 669 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 RAB40ALP0C0E4 278 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 CCDC159P0C7I6 412 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 COX6A1P12074 109 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 ATP6V1B1P15313 513 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 HPGDP15428 266 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 GSTM3P21266 225 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 CRHBPP24387 322 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 FPR3P25089 353 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 FOLR3P41439 243 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 OMPP47874 163 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 HLCSP50747 726 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 CRISP1P54107 249 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 NRG3P56975 720 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 GABARAPL2P60520 117 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 ALDH6A1Q02252 535 aaKnown RBP6.87□□□□□ -1.31
TPM1-231ENST00000561395 TSPAN31Q12999 210 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 CDK5R2Q13319 367 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 TOP3AQ13472 1001 aaPredicted RBP6.87□□□□□ -1.31
TPM1-231ENST00000561395 EFR3AQ14156 821 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 MAD2L1BPQ15013 274 aaPredicted RBP6.87□□□□□ -1.31
TPM1-231ENST00000561395 NDUFAF6Q330K2 333 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 KRTAP21-3Q3LHN1 58 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 C6orf141Q5SZD1 244 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 C1QL3Q5VWW1 255 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 KIRREL2Q6UWL6 708 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 APOOLQ6UXV4 268 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 WDR88Q6ZMY6 472 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 Q6ZPB1 254 aaPredicted RBP6.87□□□□□ -1.31
TPM1-231ENST00000561395 TIPARPQ7Z3E1 657 aaKnown RBP6.87□□□□□ -1.31
TPM1-231ENST00000561395 KIF18BQ86Y91 864 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 ENTHD1Q8IYW4 607 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 AMER2Q8N7J2 671 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 TEX19Q8NA77 164 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 POGLUT1Q8NBL1 392 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 OR5L2Q8NGL0 311 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 CNIH3Q8TBE1 160 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 FAM81AQ8TBF8 368 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 GRHL3Q8TE85 626 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 CT55Q8WUE5 264 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 TMEM239Q8WW34 195 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 NKD1Q969G9 470 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 ZNF566Q969W8 418 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 ARSGQ96EG1 525 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 FAM46AQ96IP4 442 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms