RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 KEAP1Q14145 624 aa14.24□□□□□ -0.13
LMX1B-204ENST00000561065 SQLEQ14534 574 aa14.24□□□□□ -0.13
LMX1B-204ENST00000561065 QPRTQ15274 297 aa14.24□□□□□ -0.13
LMX1B-204ENST00000561065 SLC25A53Q5H9E4 307 aa14.24□□□□□ -0.13
LMX1B-204ENST00000561065 MAVSQ7Z434 540 aa14.24□□□□□ -0.13
LMX1B-204ENST00000561065 RFWD2Q8NHY2 731 aa14.24□□□□□ -0.13
LMX1B-204ENST00000561065 ST8SIA1Q92185 356 aa14.24□□□□□ -0.13
LMX1B-204ENST00000561065 OSTF1Q92882 214 aa14.24□□□□□ -0.13
LMX1B-204ENST00000561065 INPP5KQ9BT40 448 aa14.24□□□□□ -0.13
LMX1B-204ENST00000561065 DLL4Q9NR61 685 aa14.24□□□□□ -0.13
LMX1B-204ENST00000561065 PLSCR4Q9NRQ2 329 aa14.24□□□□□ -0.13
LMX1B-204ENST00000561065 P2RX2Q9UBL9 471 aa14.24□□□□□ -0.13
LMX1B-204ENST00000561065 EDARQ9UNE0 448 aa14.24□□□□□ -0.13
LMX1B-204ENST00000561065 CORO2BQ9UQ03 480 aa14.24□□□□□ -0.13
LMX1B-204ENST00000561065 SPIN1Q9Y657 262 aaPredicted RBP14.24□□□□□ -0.13
LMX1B-204ENST00000561065 CASKO14936 926 aa14.23□□□□□ -0.13
LMX1B-204ENST00000561065 DNAJA2O60884 412 aa14.23□□□□□ -0.13
LMX1B-204ENST00000561065 H6PDO95479 791 aa14.23□□□□□ -0.13
LMX1B-204ENST00000561065 PLGP00747 810 aaPredicted RBP14.23□□□□□ -0.13
LMX1B-204ENST00000561065 DBIP07108 87 aaKnown RBP14.23□□□□□ -0.13
LMX1B-204ENST00000561065 CRISP3P54108 245 aa14.23□□□□□ -0.13
LMX1B-204ENST00000561065 CTBP2P56545 445 aa14.23□□□□□ -0.13
LMX1B-204ENST00000561065 KCNJ10P78508 379 aa14.23□□□□□ -0.13
LMX1B-204ENST00000561065 TIGD2Q4W5G0 525 aa14.23□□□□□ -0.13
LMX1B-204ENST00000561065 TYW3Q6IPR3 259 aaKnown RBP14.23□□□□□ -0.13
LMX1B-204ENST00000561065 BLOC1S3Q6QNY0 202 aa14.23□□□□□ -0.13
LMX1B-204ENST00000561065 STAC2Q6ZMT1 411 aa14.23□□□□□ -0.13
LMX1B-204ENST00000561065 FRRS1Q6ZNA5 592 aa14.23□□□□□ -0.13
LMX1B-204ENST00000561065 HMGN2P46Q86SG4 172 aa14.23□□□□□ -0.13
LMX1B-204ENST00000561065 CXorf67Q86X51 503 aaPredicted RBP14.23□□□□□ -0.13
LMX1B-204ENST00000561065 ZNF440Q8IYI8 595 aa14.23□□□□□ -0.13
LMX1B-204ENST00000561065 FAM71CQ8NEG0 241 aa14.23□□□□□ -0.13
LMX1B-204ENST00000561065 WFDC11Q8NEX6 87 aa14.23□□□□□ -0.13
LMX1B-204ENST00000561065 ZNF563Q8TA94 476 aa14.23□□□□□ -0.13
LMX1B-204ENST00000561065 ZFP90Q8TF47 636 aa14.23□□□□□ -0.13
LMX1B-204ENST00000561065 SPDL1Q96EA4 605 aa14.23□□□□□ -0.13
LMX1B-204ENST00000561065 PIK3IP1Q96FE7 263 aa14.23□□□□□ -0.13
LMX1B-204ENST00000561065 SLC39A3Q9BRY0 314 aa14.23□□□□□ -0.13
LMX1B-204ENST00000561065 KLHL4Q9C0H6 718 aa14.23□□□□□ -0.13
LMX1B-204ENST00000561065 QRSL1Q9H0R6 528 aaKnown RBP14.23□□□□□ -0.13
LMX1B-204ENST00000561065 C12orf49Q9H741 205 aa14.23□□□□□ -0.13
LMX1B-204ENST00000561065 CCDC167Q9P0B6 97 aa14.23□□□□□ -0.13
LMX1B-204ENST00000561065 ROS1P08922 2347 aa14.23□□□□□ -0.13
LMX1B-204ENST00000561065 A0A1W2PNR3 127 aa14.22□□□□□ -0.13
LMX1B-204ENST00000561065 EVPLLA8MZ36 301 aa14.22□□□□□ -0.13
LMX1B-204ENST00000561065 EDF1O60869 148 aaKnown RBP14.22□□□□□ -0.13
LMX1B-204ENST00000561065 CD99P14209 185 aa14.22□□□□□ -0.13
LMX1B-204ENST00000561065 SLC7A1P30825 629 aa14.22□□□□□ -0.13
LMX1B-204ENST00000561065 CDKN2CP42773 168 aa14.22□□□□□ -0.13
LMX1B-204ENST00000561065 HTR3AP46098 478 aa14.22□□□□□ -0.13
LMX1B-204ENST00000561065 DSTNP60981 165 aa14.22□□□□□ -0.13
LMX1B-204ENST00000561065 FADDQ13158 208 aa14.22□□□□□ -0.13
LMX1B-204ENST00000561065 SELENBP1Q13228 472 aa14.22□□□□□ -0.13
LMX1B-204ENST00000561065 LARS2Q15031 903 aaKnown RBP14.22□□□□□ -0.13
LMX1B-204ENST00000561065 TMEM176BQ3YBM2 270 aaPredicted RBP14.22□□□□□ -0.13
LMX1B-204ENST00000561065 TFAP2EQ6VUC0 442 aa14.22□□□□□ -0.13
LMX1B-204ENST00000561065 NUFIP2Q7Z417 695 aaKnown RBP14.22□□□□□ -0.13
LMX1B-204ENST00000561065 ATP6V1C2Q8NEY4 427 aa14.22□□□□□ -0.13
LMX1B-204ENST00000561065 TSPEARQ8WU66 669 aa14.22□□□□□ -0.13
LMX1B-204ENST00000561065 CPNE4Q96A23 557 aaPredicted RBP14.22□□□□□ -0.13
LMX1B-204ENST00000561065 VPS33AQ96AX1 596 aa14.22□□□□□ -0.13
LMX1B-204ENST00000561065 THUMPD3Q9BV44 507 aaKnown RBP14.22□□□□□ -0.13
LMX1B-204ENST00000561065 ZNF226Q9NYT6 803 aa14.22□□□□□ -0.13
LMX1B-204ENST00000561065 ING1Q9UK53 422 aaPredicted RBP14.22□□□□□ -0.13
LMX1B-204ENST00000561065 DSCAMO60469 2012 aa14.22□□□□□ -0.13
LMX1B-204ENST00000561065 A0A096LPI6 279 aa14.21□□□□□ -0.13
LMX1B-204ENST00000561065 IGHV3-15A0A0B4J1V0 119 aa14.21□□□□□ -0.13
LMX1B-204ENST00000561065 A0A0G2JPF8 293 aa14.21□□□□□ -0.13
LMX1B-204ENST00000561065 CLDN24A6NM45 220 aa14.21□□□□□ -0.13
LMX1B-204ENST00000561065 HNRNPCL2B2RXH8 293 aa14.21□□□□□ -0.13
LMX1B-204ENST00000561065 HNRNPCL3B7ZW38 293 aa14.21□□□□□ -0.13
LMX1B-204ENST00000561065 C5orf58C9J3I9 102 aa14.21□□□□□ -0.13
LMX1B-204ENST00000561065 CLIC1O00299 241 aa14.21□□□□□ -0.13
LMX1B-204ENST00000561065 HNRNPCL1O60812 293 aaKnown RBP14.21□□□□□ -0.13
LMX1B-204ENST00000561065 ADAM11O75078 769 aa14.21□□□□□ -0.13
LMX1B-204ENST00000561065 SASH3O75995 380 aa14.21□□□□□ -0.13
LMX1B-204ENST00000561065 UBTFL6P0CB48 400 aaPredicted RBP14.21□□□□□ -0.13
LMX1B-204ENST00000561065 HNRNPCL4P0DMR1 293 aa14.21□□□□□ -0.13
LMX1B-204ENST00000561065 PGM1P36871 562 aa14.21□□□□□ -0.13
LMX1B-204ENST00000561065 APOBEC1P41238 236 aaKnown RBP14.21□□□□□ -0.13
LMX1B-204ENST00000561065 MAP2K6P52564 334 aa14.21□□□□□ -0.13
LMX1B-204ENST00000561065 CHRNEQ04844 493 aa14.21□□□□□ -0.13
LMX1B-204ENST00000561065 AGKQ53H12 422 aa14.21□□□□□ -0.13
LMX1B-204ENST00000561065 SLC25A43Q8WUT9 341 aaPredicted RBP14.21□□□□□ -0.13
LMX1B-204ENST00000561065 GTF2H4Q92759 462 aa14.21□□□□□ -0.13
LMX1B-204ENST00000561065 ZG16BQ96DA0 208 aa14.21□□□□□ -0.13
LMX1B-204ENST00000561065 EBF4Q9BQW3 602 aa14.21□□□□□ -0.13
LMX1B-204ENST00000561065 EXOSC3Q9NQT5 275 aaKnown RBP14.21□□□□□ -0.13
LMX1B-204ENST00000561065 KLHL13Q9P2N7 655 aa14.21□□□□□ -0.13
LMX1B-204ENST00000561065 DCTN4Q9UJW0 460 aa14.21□□□□□ -0.13
LMX1B-204ENST00000561065 IFT52Q9Y366 437 aa14.21□□□□□ -0.13
LMX1B-204ENST00000561065 A0A0G2JND7 137 aa14.2□□□□□ -0.14
LMX1B-204ENST00000561065 A0A1W2PP18 115 aa14.2□□□□□ -0.14
LMX1B-204ENST00000561065 AGAP5A6NIR3 686 aa14.2□□□□□ -0.14
LMX1B-204ENST00000561065 GCM2O75603 506 aaPredicted RBP14.2□□□□□ -0.14
LMX1B-204ENST00000561065 ENPP1P22413 925 aa14.2□□□□□ -0.14
LMX1B-204ENST00000561065 EDNRAP25101 427 aa14.2□□□□□ -0.14
LMX1B-204ENST00000561065 CLK1P49759 484 aaKnown RBP14.2□□□□□ -0.14
LMX1B-204ENST00000561065 RNPS1Q15287 305 aaKnown RBP14.2□□□□□ -0.14
LMX1B-204ENST00000561065 SYPL1Q16563 259 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms