RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 TIGD2Q4W5G0 525 aa15.6■□□□□ 0.09
TSPAN3-208ENST00000560514 KLHL26Q53HC5 615 aa15.6■□□□□ 0.09
TSPAN3-208ENST00000560514 SLC25A53Q5H9E4 307 aa15.6■□□□□ 0.09
TSPAN3-208ENST00000560514 KLHL24Q6TFL4 600 aa15.6■□□□□ 0.09
TSPAN3-208ENST00000560514 UGT2A3Q6UWM9 527 aa15.6■□□□□ 0.09
TSPAN3-208ENST00000560514 TMPPEQ6ZT21 453 aa15.6■□□□□ 0.09
TSPAN3-208ENST00000560514 C17orf78Q8N4C9 275 aa15.6■□□□□ 0.09
TSPAN3-208ENST00000560514 ANKS4BQ8N8V4 417 aa15.6■□□□□ 0.09
TSPAN3-208ENST00000560514 LINC01356Q8N9X3 169 aa15.6■□□□□ 0.09
TSPAN3-208ENST00000560514 OR5W2Q8NH69 310 aa15.6■□□□□ 0.09
TSPAN3-208ENST00000560514 MZB1Q8WU39 189 aa15.6■□□□□ 0.09
TSPAN3-208ENST00000560514 CDS1Q92903 461 aa15.6■□□□□ 0.09
TSPAN3-208ENST00000560514 METTL2AQ96IZ6 378 aaKnown RBP15.6■□□□□ 0.09
TSPAN3-208ENST00000560514 EGLN2Q96KS0 407 aa15.6■□□□□ 0.09
TSPAN3-208ENST00000560514 PPCSQ9HAB8 311 aa15.6■□□□□ 0.09
TSPAN3-208ENST00000560514 DUSP22Q9NRW4 184 aa15.6■□□□□ 0.09
TSPAN3-208ENST00000560514 UPB1Q9UBR1 384 aa15.6■□□□□ 0.09
TSPAN3-208ENST00000560514 MOKQ9UQ07 419 aa15.6■□□□□ 0.09
TSPAN3-208ENST00000560514 IGKV3D-15A0A087WSY6 115 aa15.59■□□□□ 0.09
TSPAN3-208ENST00000560514 ZNF264O43296 627 aa15.59■□□□□ 0.09
TSPAN3-208ENST00000560514 AKAP10O43572 662 aa15.59■□□□□ 0.09
TSPAN3-208ENST00000560514 SEC22BO75396 215 aa15.59■□□□□ 0.09
TSPAN3-208ENST00000560514 ERCC1P07992 297 aaPredicted RBP15.59■□□□□ 0.09
TSPAN3-208ENST00000560514 EGR1P18146 543 aa15.59■□□□□ 0.09
TSPAN3-208ENST00000560514 APEX1P27695 318 aaKnown RBP15.59■□□□□ 0.09
TSPAN3-208ENST00000560514 CCT5P48643 541 aa15.59■□□□□ 0.09
TSPAN3-208ENST00000560514 TGFBR3Q03167 851 aa15.59■□□□□ 0.09
TSPAN3-208ENST00000560514 SCGB2A2Q13296 93 aa15.59■□□□□ 0.09
TSPAN3-208ENST00000560514 LASP1Q14847 261 aaKnown RBP15.59■□□□□ 0.09
TSPAN3-208ENST00000560514 CDC73Q6P1J9 531 aa15.59■□□□□ 0.09
TSPAN3-208ENST00000560514 RINLQ6ZS11 566 aa15.59■□□□□ 0.09
TSPAN3-208ENST00000560514 TRIM46Q7Z4K8 759 aa15.59■□□□□ 0.09
TSPAN3-208ENST00000560514 MTDHQ86UE4 582 aaKnown RBP15.59■□□□□ 0.09
TSPAN3-208ENST00000560514 SOX7Q9BT81 388 aa15.59■□□□□ 0.09
TSPAN3-208ENST00000560514 PIGUQ9H490 435 aa15.59■□□□□ 0.09
TSPAN3-208ENST00000560514 ANKZF1Q9H8Y5 726 aa15.59■□□□□ 0.09
TSPAN3-208ENST00000560514 ACSS1Q9NUB1 689 aaPredicted RBP15.59■□□□□ 0.09
TSPAN3-208ENST00000560514 ZCCHC3Q9NUD5 404 aaKnown RBP15.59■□□□□ 0.09
TSPAN3-208ENST00000560514 MALT1Q9UDY8 824 aa15.59■□□□□ 0.09
TSPAN3-208ENST00000560514 EIF4E2O60573 245 aaKnown RBP15.58■□□□□ 0.08
TSPAN3-208ENST00000560514 CYP7B1O75881 506 aa15.58■□□□□ 0.08
TSPAN3-208ENST00000560514 H6PDO95479 791 aa15.58■□□□□ 0.08
TSPAN3-208ENST00000560514 WNT11O96014 354 aa15.58■□□□□ 0.08
TSPAN3-208ENST00000560514 TFPIP10646 304 aa15.58■□□□□ 0.08
TSPAN3-208ENST00000560514 UBL4AP11441 157 aa15.58■□□□□ 0.08
TSPAN3-208ENST00000560514 DDX5P17844 614 aaKnown RBP15.58■□□□□ 0.08
TSPAN3-208ENST00000560514 SERPINF1P36955 418 aa15.58■□□□□ 0.08
TSPAN3-208ENST00000560514 ATP12AP54707 1039 aa15.58■□□□□ 0.08
TSPAN3-208ENST00000560514 FOXA1P55317 472 aa15.58■□□□□ 0.08
TSPAN3-208ENST00000560514 DNAJB13P59910 316 aa15.58■□□□□ 0.08
TSPAN3-208ENST00000560514 PRPS1P60891 318 aa15.58■□□□□ 0.08
TSPAN3-208ENST00000560514 MST1LQ2TV78 715 aa15.58■□□□□ 0.08
TSPAN3-208ENST00000560514 CCDC153Q494R4 210 aa15.58■□□□□ 0.08
TSPAN3-208ENST00000560514 C9orf135Q5VTT2 229 aa15.58■□□□□ 0.08
TSPAN3-208ENST00000560514 ABLIM2Q6H8Q1 611 aa15.58■□□□□ 0.08
TSPAN3-208ENST00000560514 CCNYL1Q8N7R7 359 aa15.58■□□□□ 0.08
TSPAN3-208ENST00000560514 WDR31Q8NA23 367 aa15.58■□□□□ 0.08
TSPAN3-208ENST00000560514 PIGXQ8TBF5 258 aa15.58■□□□□ 0.08
TSPAN3-208ENST00000560514 ADAMTS15Q8TE58 950 aa15.58■□□□□ 0.08
TSPAN3-208ENST00000560514 SLC25A43Q8WUT9 341 aaPredicted RBP15.58■□□□□ 0.08
TSPAN3-208ENST00000560514 TMEM234Q8WY98 164 aa15.58■□□□□ 0.08
TSPAN3-208ENST00000560514 HPS1Q92902 700 aa15.58■□□□□ 0.08
TSPAN3-208ENST00000560514 GCDHQ92947 438 aaPredicted RBP15.58■□□□□ 0.08
TSPAN3-208ENST00000560514 ZNF764Q96H86 408 aaPredicted RBP15.58■□□□□ 0.08
TSPAN3-208ENST00000560514 QRSL1Q9H0R6 528 aaKnown RBP15.58■□□□□ 0.08
TSPAN3-208ENST00000560514 RAB1BQ9H0U4 201 aa15.58■□□□□ 0.08
TSPAN3-208ENST00000560514 GSTO2Q9H4Y5 243 aa15.58■□□□□ 0.08
TSPAN3-208ENST00000560514 REEP4Q9H6H4 257 aa15.58■□□□□ 0.08
TSPAN3-208ENST00000560514 DTNAQ9Y4J8 743 aa15.58■□□□□ 0.08
TSPAN3-208ENST00000560514 G3V2L1 256 aa15.57■□□□□ 0.08
TSPAN3-208ENST00000560514 GLRA3O75311 464 aa15.57■□□□□ 0.08
TSPAN3-208ENST00000560514 VENTXO95231 258 aa15.57■□□□□ 0.08
TSPAN3-208ENST00000560514 HMGN2P05204 90 aaKnown RBP15.57■□□□□ 0.08
TSPAN3-208ENST00000560514 ITGA5P08648 1049 aa15.57■□□□□ 0.08
TSPAN3-208ENST00000560514 FAM153BP0C7A2 387 aa15.57■□□□□ 0.08
TSPAN3-208ENST00000560514 MYL2P10916 166 aa15.57■□□□□ 0.08
TSPAN3-208ENST00000560514 CREB1P16220 341 aa15.57■□□□□ 0.08
TSPAN3-208ENST00000560514 CRHR1P34998 444 aa15.57■□□□□ 0.08
TSPAN3-208ENST00000560514 MERTKQ12866 999 aa15.57■□□□□ 0.08
TSPAN3-208ENST00000560514 FAM153CQ494X1 144 aa15.57■□□□□ 0.08
TSPAN3-208ENST00000560514 SYT14P1Q58G82 188 aa15.57■□□□□ 0.08
TSPAN3-208ENST00000560514 DCST2Q5T1A1 773 aa15.57■□□□□ 0.08
TSPAN3-208ENST00000560514 C1QTNF12Q5T7M4 302 aa15.57■□□□□ 0.08
TSPAN3-208ENST00000560514 CASP12Q6UXS9 341 aa15.57■□□□□ 0.08
TSPAN3-208ENST00000560514 ZYG11AQ6WRX3 759 aa15.57■□□□□ 0.08
TSPAN3-208ENST00000560514 SPATA19Q7Z5L4 167 aa15.57■□□□□ 0.08
TSPAN3-208ENST00000560514 C1orf162Q8NEQ5 155 aaPredicted RBP15.57■□□□□ 0.08
TSPAN3-208ENST00000560514 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.57■□□□□ 0.08
TSPAN3-208ENST00000560514 ST8SIA1Q92185 356 aa15.57■□□□□ 0.08
TSPAN3-208ENST00000560514 FAM120BQ96EK7 910 aaKnown RBP15.57■□□□□ 0.08
TSPAN3-208ENST00000560514 METTL17Q9H7H0 456 aaPredicted RBP15.57■□□□□ 0.08
TSPAN3-208ENST00000560514 SLC17A5Q9NRA2 495 aa15.57■□□□□ 0.08
TSPAN3-208ENST00000560514 DCTN4Q9UJW0 460 aa15.57■□□□□ 0.08
TSPAN3-208ENST00000560514 FAF1Q9UNN5 650 aaPredicted RBP15.57■□□□□ 0.08
TSPAN3-208ENST00000560514 PCDHB14Q9Y5E9 798 aa15.57■□□□□ 0.08
TSPAN3-208ENST00000560514 SPIN1Q9Y657 262 aaPredicted RBP15.57■□□□□ 0.08
TSPAN3-208ENST00000560514 B9A039 149 aa15.56■□□□□ 0.08
TSPAN3-208ENST00000560514 STAMBPO95630 424 aa15.56■□□□□ 0.08
TSPAN3-208ENST00000560514 KRT16P08779 473 aa15.56■□□□□ 0.08
TSPAN3-208ENST00000560514 MAGEA8P43361 318 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms