RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 FANCFQ9NPI8 374 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 B3GAT2Q9NPZ5 323 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 C2orf42Q9NWW7 574 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 TAS2R10Q9NYW0 307 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 ABCD2Q9UBJ2 740 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 NUP50Q9UKX7 468 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 M0R129 80 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 TNFRSF10AO00220 468 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 HCRTR1O43613 425 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 ICMTO60725 284 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 CD1EP15812 388 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 CCNOP22674 350 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 GCGRP47871 477 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 SSR4P51571 173 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 PITPNAQ00169 270 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 CD300CQ08708 224 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 TMEM44Q2T9K0 475 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 KLHDC8BQ8IXV7 354 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 GDPD1Q8N9F7 314 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 NEIL3Q8TAT5 605 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 ADAD1Q96M93 576 aaKnown RBP9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 OR5B2Q96R09 309 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 FUZQ9BT04 418 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 SRA1Q9HD15 236 aaKnown RBP9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 SH3BGRL2Q9UJC5 107 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 STUB1Q9UNE7 303 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 SPAARA0A1B0GVQ0 90 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 H0YIG0 161 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 STK17BO94768 372 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 SP9P0CG40 484 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 HK1P19367 917 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 BSGP35613 385 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 CRISP1P54107 249 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 CDH11P55287 796 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 GABREP78334 506 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 PRKCDQ05655 676 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 GAB4Q2WGN9 574 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 FAM219BQ5XKK7 198 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 SLC27A4Q6P1M0 643 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 MED25Q71SY5 747 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 FAM109AQ8N4B1 249 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 FANK1Q8TC84 345 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 THEM6Q8WUY1 208 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 GPER1Q99527 375 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 FOLH1BQ9HBA9 442 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 FAM60AQ9NP50 221 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 INIPQ9NRY2 104 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 UPB1Q9UBR1 384 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 TBC1D24Q9ULP9 559 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 PPT2Q9UMR5 302 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 PCDHGB7Q9Y5F8 929 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 CIB4A0PJX0 185 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 ARGFXA6NJG6 315 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 PRKNO60260 465 aaPredicted RBP9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 ENTPD6O75354 484 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 ZNF806P0C7X5 589 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 ARAFP10398 606 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 GNALP38405 381 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 GAS6Q14393 721 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 RFT1Q96AA3 541 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 PIGUQ9H490 435 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 PLEKHA1Q9HB21 404 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 ZNF160Q9HCG1 818 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 TNFRSF10DQ9UBN6 386 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 SLC35A3Q9Y2D2 325 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 PCDHGA5Q9Y5G8 931 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 FMO6PO60774 539 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 RAB36O95755 333 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 ZGLP1P0C6A0 271 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 ITGAMP11215 1152 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 ZNF100Q8IYN0 542 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 SAMD12Q8N8I0 201 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 TSEN15Q8WW01 171 aaKnown RBP9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 THOC3Q96J01 351 aaKnown RBP9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 ZNF583Q96ND8 569 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 PINK1Q9BXM7 581 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 CDCP1Q9H5V8 836 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 MGAT4AQ9UM21 535 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 NOX1Q9Y5S8 564 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 FXYD6-FXYD2A0A087WZ82 144 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 EIF1AYO14602 144 aaKnown RBP9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 RPP14O95059 124 aaKnown RBP9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 SOD1P00441 154 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 PRKACAP17612 351 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 COX20Q5RI15 118 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 HES3Q5TGS1 186 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 OLFML2AQ68BL7 652 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 RPTNQ6XPR3 784 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 BTLAQ7Z6A9 289 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 PTRH1Q86Y79 214 aaKnown RBP9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 NAXDQ8IW45 347 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 SIMC1Q8NDZ2 872 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 DNAJA4Q8WW22 397 aaPredicted RBP9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 TAAR9Q96RI9 348 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 CPPED1Q9BRF8 314 aaPredicted RBP9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 NAA11Q9BSU3 229 aaPredicted RBP9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 FXYD6Q9H0Q3 95 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 RABL2AQ9UBK7 228 aaPredicted RBP9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 SLC7A7Q9UM01 511 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms