RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 ATG4DQ86TL0 474 aaPredicted RBP9.8□□□□□ -0.84
TPM1-217ENST00000559108 CARM1Q86X55 608 aa9.8□□□□□ -0.84
TPM1-217ENST00000559108 P3H2Q8IVL5 708 aa9.8□□□□□ -0.84
TPM1-217ENST00000559108 CLEC18CQ8NCF0 446 aa9.8□□□□□ -0.84
TPM1-217ENST00000559108 ATP6V1C2Q8NEY4 427 aa9.8□□□□□ -0.84
TPM1-217ENST00000559108 HSH2DQ96JZ2 352 aa9.8□□□□□ -0.84
TPM1-217ENST00000559108 ARL5BQ96KC2 179 aa9.8□□□□□ -0.84
TPM1-217ENST00000559108 MRGPRX4Q96LA9 322 aa9.8□□□□□ -0.84
TPM1-217ENST00000559108 PIGQQ9BRB3 760 aa9.8□□□□□ -0.84
TPM1-217ENST00000559108 THTPAQ9BU02 230 aa9.8□□□□□ -0.84
TPM1-217ENST00000559108 SPATA5L1Q9BVQ7 753 aa9.8□□□□□ -0.84
TPM1-217ENST00000559108 SRXN1Q9BYN0 137 aa9.8□□□□□ -0.84
TPM1-217ENST00000559108 CLCF1Q9UBD9 225 aa9.8□□□□□ -0.84
TPM1-217ENST00000559108 ZNF232Q9UNY5 417 aa9.8□□□□□ -0.84
TPM1-217ENST00000559108 CAMK2AQ9UQM7 478 aa9.8□□□□□ -0.84
TPM1-217ENST00000559108 AP3M1Q9Y2T2 418 aa9.8□□□□□ -0.84
TPM1-217ENST00000559108 SH3GLB1Q9Y371 365 aa9.8□□□□□ -0.84
TPM1-217ENST00000559108 V9GYQ6 96 aa9.8□□□□□ -0.84
TPM1-217ENST00000559108 PCNX1Q96RV3 2341 aa9.8□□□□□ -0.84
TPM1-217ENST00000559108 MYO18BQ8IUG5 2567 aa9.8□□□□□ -0.84
TPM1-217ENST00000559108 A0A0B4J2E0 115 aa9.79□□□□□ -0.84
TPM1-217ENST00000559108 TRGV8A0A0C4DH27 118 aa9.79□□□□□ -0.84
TPM1-217ENST00000559108 A0A1B0GX12 115 aa9.79□□□□□ -0.84
TPM1-217ENST00000559108 A0A1W2PNR3 127 aa9.79□□□□□ -0.84
TPM1-217ENST00000559108 ZNF814B7Z6K7 855 aa9.79□□□□□ -0.84
TPM1-217ENST00000559108 J3KTA2 159 aa9.79□□□□□ -0.84
TPM1-217ENST00000559108 J3QKU1 62 aa9.79□□□□□ -0.84
TPM1-217ENST00000559108 TNFSF11O14788 317 aa9.79□□□□□ -0.84
TPM1-217ENST00000559108 GSTA4O15217 222 aa9.79□□□□□ -0.84
TPM1-217ENST00000559108 ZNF682O95780 498 aa9.79□□□□□ -0.84
TPM1-217ENST00000559108 TGM6O95932 706 aa9.79□□□□□ -0.84
TPM1-217ENST00000559108 C8BP07358 591 aa9.79□□□□□ -0.84
TPM1-217ENST00000559108 GLI4P10075 376 aa9.79□□□□□ -0.84
TPM1-217ENST00000559108 POU3F2P20265 443 aaPredicted RBP9.79□□□□□ -0.84
TPM1-217ENST00000559108 SLC1A3P43003 542 aa9.79□□□□□ -0.84
TPM1-217ENST00000559108 SLC6A8P48029 635 aa9.79□□□□□ -0.84
TPM1-217ENST00000559108 MNAT1P51948 309 aa9.79□□□□□ -0.84
TPM1-217ENST00000559108 SELENOWP63302 87 aa9.79□□□□□ -0.84
TPM1-217ENST00000559108 LSM11P83369 360 aaKnown RBP eCLIP9.79□□□□□ -0.84
TPM1-217ENST00000559108 EGR4Q05215 589 aa9.79□□□□□ -0.84
TPM1-217ENST00000559108 CYP2R1Q6VVX0 501 aa9.79□□□□□ -0.84
TPM1-217ENST00000559108 RPTNQ6XPR3 784 aa9.79□□□□□ -0.84
TPM1-217ENST00000559108 ASRGL1Q7L266 308 aa9.79□□□□□ -0.84
TPM1-217ENST00000559108 ZNF550Q7Z398 422 aa9.79□□□□□ -0.84
TPM1-217ENST00000559108 GRINAQ7Z429 371 aa9.79□□□□□ -0.84
TPM1-217ENST00000559108 ATCAYQ86WG3 371 aa9.79□□□□□ -0.84
TPM1-217ENST00000559108 LSMEM1Q8N8F7 131 aa9.79□□□□□ -0.84
TPM1-217ENST00000559108 NAXEQ8NCW5 288 aa9.79□□□□□ -0.84
TPM1-217ENST00000559108 ZNF563Q8TA94 476 aa9.79□□□□□ -0.84
TPM1-217ENST00000559108 SLC35B4Q969S0 331 aa9.79□□□□□ -0.84
TPM1-217ENST00000559108 FAM162AQ96A26 154 aa9.79□□□□□ -0.84
TPM1-217ENST00000559108 SARAFQ96BY9 339 aa9.79□□□□□ -0.84
TPM1-217ENST00000559108 CCDC124Q96CT7 223 aaKnown RBP9.79□□□□□ -0.84
TPM1-217ENST00000559108 TPD52L3Q96J77 140 aa9.79□□□□□ -0.84
TPM1-217ENST00000559108 PRSS27Q9BQR3 290 aa9.79□□□□□ -0.84
TPM1-217ENST00000559108 BTBD10Q9BSF8 475 aa9.79□□□□□ -0.84
TPM1-217ENST00000559108 AMBRA1Q9C0C7 1298 aa9.79□□□□□ -0.84
TPM1-217ENST00000559108 LRMDAQ9H2I8 198 aa9.79□□□□□ -0.84
TPM1-217ENST00000559108 GORASP2Q9H8Y8 452 aa9.79□□□□□ -0.84
TPM1-217ENST00000559108 DCAF13Q9NV06 445 aaKnown RBP9.79□□□□□ -0.84
TPM1-217ENST00000559108 NDE1Q9NXR1 346 aa9.79□□□□□ -0.84
TPM1-217ENST00000559108 ACAD8Q9UKU7 415 aa9.79□□□□□ -0.84
TPM1-217ENST00000559108 PRPF19Q9UMS4 504 aaKnown RBP9.79□□□□□ -0.84
TPM1-217ENST00000559108 DIDO1Q9BTC0 2240 aaKnown RBP9.79□□□□□ -0.84
TPM1-217ENST00000559108 TMED7-TICAM2A0A0A6YYA0 188 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 CPSF4LA6NMK7 179 aaKnown RBP9.78□□□□□ -0.84
TPM1-217ENST00000559108 CLCA1A8K7I4 914 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 EIF1AYO14602 144 aaKnown RBP9.78□□□□□ -0.84
TPM1-217ENST00000559108 BCKDKO14874 412 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 GYG2O15488 501 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 LRRTM2O43300 516 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 RAMP1O60894 148 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 NPIPB7O75200 414 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 AQP8O94778 261 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 PRKD3O94806 890 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 PRSS23O95084 383 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 IMPDH2P12268 514 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 GP1BBP13224 206 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 ME2P23368 584 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 ACVR2AP27037 513 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 ELK4P28324 431 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 ADH6P28332 368 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 YAP1P46937 504 aaKnown RBP9.78□□□□□ -0.84
TPM1-217ENST00000559108 ERFP50548 548 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 CDH12P55289 794 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 NUP107P57740 925 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 RAC1P63000 192 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 SELENBP1Q13228 472 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 OR1Q1Q15612 314 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 ENTPD8Q5MY95 495 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 C1orf185Q5T7R7 199 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 WBP2NLQ6ICG8 309 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 LCN8Q6JVE9 175 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 AAGABQ6PD74 315 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 FJX1Q86VR8 437 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 ZNF440Q8IYI8 595 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 LILRA2Q8N149 483 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 C9orf106Q8NAJ2 232 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 OR52E4Q8NGH9 312 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 OR10D3Q8NH80 312 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms