RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 ENPEPQ07075 957 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 KLRB1Q12918 225 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 PLD1Q13393 1074 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 CUL2Q13617 745 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 GK3PQ14409 553 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 GRB7Q14451 532 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 GANABQ14697 944 aaKnown RBP1.23□□□□□ -2.21
USP3-209ENST00000558925 SLC15A2Q16348 729 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 Q1RN00 199 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 SFT2D3Q587I9 215 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 DCST2Q5T1A1 773 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 BEND3Q5T5X7 828 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 OR2G6Q5TZ20 316 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 PRAMEF20Q5VT98 475 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 RNLSQ5VYX0 342 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 VITQ6UXI7 678 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 KDM7AQ6ZMT4 941 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 GTSCR1Q86UQ5 136 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 SERINC5Q86VE9 423 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 FAM228AQ86W67 206 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 CD177Q8N6Q3 437 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 C15orf54Q8N8G6 183 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 OR10A7Q8NGE5 316 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 OR52H1Q8NGJ2 320 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 OR1L6Q8NGR2 347 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 OR2A12Q8NGT7 310 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 OR2L2Q8NH16 312 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 RHOXF1Q8NHV9 184 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 ST8SIA1Q92185 356 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 RAPGEF5Q92565 580 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 TUBGCP3Q96CW5 907 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 SLC25A38Q96DW6 304 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 RPRD1AQ96P16 312 aaPredicted RBP1.23□□□□□ -2.21
USP3-209ENST00000558925 OR5M11Q96RB7 305 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 RNF2Q99496 336 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 FMO2Q99518 471 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 COPS8Q99627 209 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 KLHDC3Q9BQ90 382 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 ZNF670Q9BS34 389 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 NIPSNAP3BQ9BS92 247 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 TCHPQ9BT92 498 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 GPR61Q9BZJ8 451 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 YY1AP1Q9H869 796 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 SGK2Q9HBY8 427 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 MCCC2Q9HCC0 563 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 TM9SF3Q9HD45 589 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP1.23□□□□□ -2.21
USP3-209ENST00000558925 NMRK1Q9NWW6 199 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 B3GNT2Q9NY97 397 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 OR1A1Q9P1Q5 309 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 ABCD2Q9UBJ2 740 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 SEC14L3Q9UDX4 400 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 PISDQ9UG56 409 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 SUN2Q9UH99 717 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 SLC7A8Q9UHI5 535 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 ZNF639Q9UID6 485 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 STAP1Q9ULZ2 295 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 PRPF19Q9UMS4 504 aaKnown RBP1.23□□□□□ -2.21
USP3-209ENST00000558925 UBQLN1Q9UMX0 589 aaKnown RBP1.23□□□□□ -2.21
USP3-209ENST00000558925 NPIPA1Q9UND3 350 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 SAMD4AQ9UPU9 718 aaKnown RBP1.23□□□□□ -2.21
USP3-209ENST00000558925 ERVW-1Q9UQF0 538 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 PIGLQ9Y2B2 252 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 IFT52Q9Y366 437 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 FRMPD3Q5JV73 1810 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 CROCCQ5TZA2 2017 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 ZNF318Q5VUA4 2279 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 TP53BP1Q12888 1972 aaPredicted RBP1.23□□□□□ -2.21
USP3-209ENST00000558925 POGZQ7Z3K3 1410 aa1.23□□□□□ -2.21
USP3-209ENST00000558925 ANKRD30BQ9BXX2 1392 aa1.22□□□□□ -2.21
USP3-209ENST00000558925 IGKV1D-8A0A087WSZ0 117 aa1.22□□□□□ -2.21
USP3-209ENST00000558925 KIR2DL5BA0A0G2JN68 375 aa1.22□□□□□ -2.21
USP3-209ENST00000558925 KIR2DL5BA0A0G2JPC4 375 aa1.22□□□□□ -2.21
USP3-209ENST00000558925 A0A0G2JRQ6 117 aa1.22□□□□□ -2.21
USP3-209ENST00000558925 SMIM28A0A1B0GU29 152 aa1.22□□□□□ -2.21
USP3-209ENST00000558925 A0A1B0GWB2 263 aa1.22□□□□□ -2.21
USP3-209ENST00000558925 TCRBV9S1A1TA0A576 114 aa1.22□□□□□ -2.21
USP3-209ENST00000558925 GOLGA8OA6NCC3 632 aa1.22□□□□□ -2.21
USP3-209ENST00000558925 TUBAL3A6NHL2 446 aa1.22□□□□□ -2.21
USP3-209ENST00000558925 FAM47DPA6NHR8 397 aa1.22□□□□□ -2.21
USP3-209ENST00000558925 DHRS7CA6NNS2 312 aa1.22□□□□□ -2.21
USP3-209ENST00000558925 F5H6K3 240 aa1.22□□□□□ -2.21
USP3-209ENST00000558925 GOLGA8NF8WBI6 632 aa1.22□□□□□ -2.21
USP3-209ENST00000558925 GFYI3L273 518 aa1.22□□□□□ -2.21
USP3-209ENST00000558925 K7N7A8 449 aa1.22□□□□□ -2.21
USP3-209ENST00000558925 POLR2DO15514 142 aaKnown RBP1.22□□□□□ -2.21
USP3-209ENST00000558925 MBTPS2O43462 519 aa1.22□□□□□ -2.21
USP3-209ENST00000558925 PRKAB2O43741 272 aa1.22□□□□□ -2.21
USP3-209ENST00000558925 CXCL13O43927 109 aa1.22□□□□□ -2.21
USP3-209ENST00000558925 OR10H3O60404 316 aa1.22□□□□□ -2.21
USP3-209ENST00000558925 PFKFB2O60825 505 aa1.22□□□□□ -2.21
USP3-209ENST00000558925 ERLIN1O75477 346 aa1.22□□□□□ -2.21
USP3-209ENST00000558925 SLITRK3O94933 977 aa1.22□□□□□ -2.21
USP3-209ENST00000558925 LYPD3O95274 346 aa1.22□□□□□ -2.21
USP3-209ENST00000558925 STAMBPO95630 424 aa1.22□□□□□ -2.21
USP3-209ENST00000558925 AP2A1O95782 977 aa1.22□□□□□ -2.21
USP3-209ENST00000558925 TSPAN12O95859 305 aa1.22□□□□□ -2.21
USP3-209ENST00000558925 IGHG4P01861 327 aa1.22□□□□□ -2.21
USP3-209ENST00000558925 DBTP11182 482 aaKnown RBP1.22□□□□□ -2.21
USP3-209ENST00000558925 RPS2P15880 293 aaKnown RBP1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms