RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 IDH2P48735 452 aaKnown RBP10.74□□□□□ -0.69
TPM1-216ENST00000558910 DSTNP60981 165 aa10.74□□□□□ -0.69
TPM1-216ENST00000558910 KCNJ10P78508 379 aa10.74□□□□□ -0.69
TPM1-216ENST00000558910 FGFBP1Q14512 234 aa10.74□□□□□ -0.69
TPM1-216ENST00000558910 PAGE3Q5JUK9 113 aa10.74□□□□□ -0.69
TPM1-216ENST00000558910 ARFGAP2Q8N6H7 521 aa10.74□□□□□ -0.69
TPM1-216ENST00000558910 ACBD4Q8NC06 268 aa10.74□□□□□ -0.69
TPM1-216ENST00000558910 ABHD3Q8WU67 409 aa10.74□□□□□ -0.69
TPM1-216ENST00000558910 GTF2H4Q92759 462 aa10.74□□□□□ -0.69
TPM1-216ENST00000558910 MAL2Q969L2 176 aa10.74□□□□□ -0.69
TPM1-216ENST00000558910 SPDL1Q96EA4 605 aa10.74□□□□□ -0.69
TPM1-216ENST00000558910 TREX2Q9BQ50 279 aaPredicted RBP10.74□□□□□ -0.69
TPM1-216ENST00000558910 SLC38A1Q9H2H9 487 aa10.74□□□□□ -0.69
TPM1-216ENST00000558910 CLEC4MQ9H2X3 399 aaPredicted RBP10.74□□□□□ -0.69
TPM1-216ENST00000558910 PIGMQ9H3S5 423 aa10.74□□□□□ -0.69
TPM1-216ENST00000558910 RNF122Q9H9V4 155 aa10.74□□□□□ -0.69
TPM1-216ENST00000558910 HHATLQ9HCP6 504 aa10.74□□□□□ -0.69
TPM1-216ENST00000558910 CTPS2Q9NRF8 586 aa10.74□□□□□ -0.69
TPM1-216ENST00000558910 RLIMQ9NVW2 624 aa10.74□□□□□ -0.69
TPM1-216ENST00000558910 ZNF446Q9NWS9 450 aa10.74□□□□□ -0.69
TPM1-216ENST00000558910 P2RX2Q9UBL9 471 aa10.74□□□□□ -0.69
TPM1-216ENST00000558910 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.74□□□□□ -0.69
TPM1-216ENST00000558910 EMC9Q9Y3B6 208 aa10.74□□□□□ -0.69
TPM1-216ENST00000558910 ZNF175Q9Y473 711 aa10.74□□□□□ -0.69
TPM1-216ENST00000558910 PCDHB14Q9Y5E9 798 aa10.74□□□□□ -0.69
TPM1-216ENST00000558910 ANKHD1Q8IWZ3 2542 aaKnown RBP10.74□□□□□ -0.69
TPM1-216ENST00000558910 SH3D21A4FU49 640 aa10.73□□□□□ -0.69
TPM1-216ENST00000558910 A6NNC1 897 aa10.73□□□□□ -0.69
TPM1-216ENST00000558910 A8MXE2 369 aa10.73□□□□□ -0.69
TPM1-216ENST00000558910 CASKO14936 926 aa10.73□□□□□ -0.69
TPM1-216ENST00000558910 FRS3O43559 492 aa10.73□□□□□ -0.69
TPM1-216ENST00000558910 TGDSO95455 350 aa10.73□□□□□ -0.69
TPM1-216ENST00000558910 FCGR2AP12318 317 aa10.73□□□□□ -0.69
TPM1-216ENST00000558910 CAPN3P20807 821 aa10.73□□□□□ -0.69
TPM1-216ENST00000558910 ENPP1P22413 925 aa10.73□□□□□ -0.69
TPM1-216ENST00000558910 SUMO3P55854 103 aaPredicted RBP10.73□□□□□ -0.69
TPM1-216ENST00000558910 HOXC5Q00444 222 aa10.73□□□□□ -0.69
TPM1-216ENST00000558910 TSC22D1Q15714 1073 aa10.73□□□□□ -0.69
TPM1-216ENST00000558910 LRRC74BQ6ZQY2 392 aa10.73□□□□□ -0.69
TPM1-216ENST00000558910 PLEKHM3Q6ZWE6 761 aa10.73□□□□□ -0.69
TPM1-216ENST00000558910 FCRLAQ7L513 359 aa10.73□□□□□ -0.69
TPM1-216ENST00000558910 FAM214BQ7L5A3 538 aa10.73□□□□□ -0.69
TPM1-216ENST00000558910 NUFIP2Q7Z417 695 aaKnown RBP10.73□□□□□ -0.69
TPM1-216ENST00000558910 FUNDC1Q8IVP5 155 aa10.73□□□□□ -0.69
TPM1-216ENST00000558910 TUSC5Q8IXB3 177 aa10.73□□□□□ -0.69
TPM1-216ENST00000558910 CADM2Q8N3J6 435 aa10.73□□□□□ -0.69
TPM1-216ENST00000558910 OR52P1PQ8NH57 321 aa10.73□□□□□ -0.69
TPM1-216ENST00000558910 TMEM19Q96HH6 336 aa10.73□□□□□ -0.69
TPM1-216ENST00000558910 MRGPRX4Q96LA9 322 aa10.73□□□□□ -0.69
TPM1-216ENST00000558910 TRNT1Q96Q11 434 aaKnown RBP10.73□□□□□ -0.69
TPM1-216ENST00000558910 MED18Q9BUE0 208 aa10.73□□□□□ -0.69
TPM1-216ENST00000558910 CCDC28BQ9BUN5 200 aa10.73□□□□□ -0.69
TPM1-216ENST00000558910 OR11A1Q9GZK7 315 aa10.73□□□□□ -0.69
TPM1-216ENST00000558910 PAIP1Q9H074 479 aaKnown RBP10.73□□□□□ -0.69
TPM1-216ENST00000558910 COQ10BQ9H8M1 238 aa10.73□□□□□ -0.69
TPM1-216ENST00000558910 TIGARQ9NQ88 270 aa10.73□□□□□ -0.69
TPM1-216ENST00000558910 SERINC1Q9NRX5 453 aa10.73□□□□□ -0.69
TPM1-216ENST00000558910 JKAMPQ9P055 326 aa10.73□□□□□ -0.69
TPM1-216ENST00000558910 C6orf203Q9P0P8 240 aaPredicted RBP10.73□□□□□ -0.69
TPM1-216ENST00000558910 KLHL13Q9P2N7 655 aa10.73□□□□□ -0.69
TPM1-216ENST00000558910 FOXD3Q9UJU5 478 aaPredicted RBP10.73□□□□□ -0.69
TPM1-216ENST00000558910 SLC35A3Q9Y2D2 325 aa10.73□□□□□ -0.69
TPM1-216ENST00000558910 HEATR5AQ86XA9 2040 aa10.72□□□□□ -0.69
TPM1-216ENST00000558910 C7orf72A4D263 438 aa10.72□□□□□ -0.69
TPM1-216ENST00000558910 TMEM247A6NEH6 219 aa10.72□□□□□ -0.69
TPM1-216ENST00000558910 GJE1A6NN92 205 aa10.72□□□□□ -0.69
TPM1-216ENST00000558910 C5orf58C9J3I9 102 aa10.72□□□□□ -0.69
TPM1-216ENST00000558910 CLIC1O00299 241 aa10.72□□□□□ -0.69
TPM1-216ENST00000558910 MSTNO14793 375 aa10.72□□□□□ -0.69
TPM1-216ENST00000558910 ADAMDEC1O15204 470 aa10.72□□□□□ -0.69
TPM1-216ENST00000558910 ADAM11O75078 769 aa10.72□□□□□ -0.69
TPM1-216ENST00000558910 VIMP08670 466 aaKnown RBP10.72□□□□□ -0.69
TPM1-216ENST00000558910 CD79BP40259 229 aa10.72□□□□□ -0.69
TPM1-216ENST00000558910 OR2B6P58173 313 aa10.72□□□□□ -0.69
TPM1-216ENST00000558910 PLAURQ03405 335 aa10.72□□□□□ -0.69
TPM1-216ENST00000558910 LRRC74AQ0VAA2 488 aa10.72□□□□□ -0.69
TPM1-216ENST00000558910 SELENBP1Q13228 472 aa10.72□□□□□ -0.69
TPM1-216ENST00000558910 SQLEQ14534 574 aa10.72□□□□□ -0.69
TPM1-216ENST00000558910 MAPK11Q15759 364 aa10.72□□□□□ -0.69
TPM1-216ENST00000558910 ZNF239Q16600 458 aaKnown RBP10.72□□□□□ -0.69
TPM1-216ENST00000558910 FBXL19-AS1Q494R0 122 aa10.72□□□□□ -0.69
TPM1-216ENST00000558910 MRPL2Q5T653 305 aaKnown RBP10.72□□□□□ -0.69
TPM1-216ENST00000558910 LINC00114Q6XXX2 140 aa10.72□□□□□ -0.69
TPM1-216ENST00000558910 ZNF836Q6ZNA1 936 aa10.72□□□□□ -0.69
TPM1-216ENST00000558910 SYT9Q86SS6 491 aa10.72□□□□□ -0.69
TPM1-216ENST00000558910 PEX5LQ8IYB4 626 aa10.72□□□□□ -0.69
TPM1-216ENST00000558910 NFKBIDQ8NI38 313 aa10.72□□□□□ -0.69
TPM1-216ENST00000558910 FAM222BQ8WU58 562 aa10.72□□□□□ -0.69
TPM1-216ENST00000558910 SLC38A5Q8WUX1 472 aa10.72□□□□□ -0.69
TPM1-216ENST00000558910 TMEM234Q8WY98 164 aa10.72□□□□□ -0.69
TPM1-216ENST00000558910 GMPPAQ96IJ6 420 aaPredicted RBP10.72□□□□□ -0.69
TPM1-216ENST00000558910 WFIKKN1Q96NZ8 548 aa10.72□□□□□ -0.69
TPM1-216ENST00000558910 SLC39A3Q9BRY0 314 aa10.72□□□□□ -0.69
TPM1-216ENST00000558910 SAP130Q9H0E3 1048 aa10.72□□□□□ -0.69
TPM1-216ENST00000558910 MTHFD2LQ9H903 347 aaPredicted RBP10.72□□□□□ -0.69
TPM1-216ENST00000558910 CACYBPQ9HB71 228 aaKnown RBP10.72□□□□□ -0.69
TPM1-216ENST00000558910 BRD7Q9NPI1 651 aa10.72□□□□□ -0.69
TPM1-216ENST00000558910 POLE3Q9NRF9 147 aa10.72□□□□□ -0.69
TPM1-216ENST00000558910 NDRG3Q9UGV2 375 aa10.72□□□□□ -0.69
TPM1-216ENST00000558910 LIPT1Q9Y234 373 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms