RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 SPNS3Q6ZMD2 512 aa11.14□□□□□ -0.63
SMAD3-208ENST00000558827 LRRC74BQ6ZQY2 392 aa11.14□□□□□ -0.63
SMAD3-208ENST00000558827 GLB1L3Q8NCI6 653 aaPredicted RBP11.14□□□□□ -0.63
SMAD3-208ENST00000558827 WDR60Q8WVS4 1066 aa11.14□□□□□ -0.63
SMAD3-208ENST00000558827 TMEM234Q8WY98 164 aa11.14□□□□□ -0.63
SMAD3-208ENST00000558827 ST8SIA1Q92185 356 aa11.14□□□□□ -0.63
SMAD3-208ENST00000558827 CPNE4Q96A23 557 aaPredicted RBP11.14□□□□□ -0.63
SMAD3-208ENST00000558827 ITCHQ96J02 903 aa11.14□□□□□ -0.63
SMAD3-208ENST00000558827 ARL5BQ96KC2 179 aa11.14□□□□□ -0.63
SMAD3-208ENST00000558827 TRNT1Q96Q11 434 aaKnown RBP11.14□□□□□ -0.63
SMAD3-208ENST00000558827 ACTR6Q9GZN1 396 aa11.14□□□□□ -0.63
SMAD3-208ENST00000558827 TPT1P8Q9HAU6 139 aa11.14□□□□□ -0.63
SMAD3-208ENST00000558827 SDR39U1Q9NRG7 319 aaPredicted RBP11.14□□□□□ -0.63
SMAD3-208ENST00000558827 SERINC1Q9NRX5 453 aa11.14□□□□□ -0.63
SMAD3-208ENST00000558827 ZNF226Q9NYT6 803 aa11.14□□□□□ -0.63
SMAD3-208ENST00000558827 KLHL13Q9P2N7 655 aa11.14□□□□□ -0.63
SMAD3-208ENST00000558827 PRSS50Q9UI38 385 aa11.14□□□□□ -0.63
SMAD3-208ENST00000558827 SLC35A3Q9Y2D2 325 aa11.14□□□□□ -0.63
SMAD3-208ENST00000558827 FAM234BA2RU67 622 aa11.13□□□□□ -0.63
SMAD3-208ENST00000558827 AGAP5A6NIR3 686 aa11.13□□□□□ -0.63
SMAD3-208ENST00000558827 SULT2B1O00204 365 aa11.13□□□□□ -0.63
SMAD3-208ENST00000558827 POLR3GO15318 223 aaPredicted RBP11.13□□□□□ -0.63
SMAD3-208ENST00000558827 ADAP00813 363 aa11.13□□□□□ -0.63
SMAD3-208ENST00000558827 IGHV3-9P01782 118 aa11.13□□□□□ -0.63
SMAD3-208ENST00000558827 BCHEP06276 602 aa11.13□□□□□ -0.63
SMAD3-208ENST00000558827 YES1P07947 543 aa11.13□□□□□ -0.63
SMAD3-208ENST00000558827 PABPC4LP0CB38 370 aaKnown RBP11.13□□□□□ -0.63
SMAD3-208ENST00000558827 NID1P14543 1247 aa11.13□□□□□ -0.63
SMAD3-208ENST00000558827 IL7RP16871 459 aa11.13□□□□□ -0.63
SMAD3-208ENST00000558827 DIO1P49895 249 aa11.13□□□□□ -0.63
SMAD3-208ENST00000558827 ANXA11P50995 505 aaKnown RBP11.13□□□□□ -0.63
SMAD3-208ENST00000558827 MVDP53602 400 aa11.13□□□□□ -0.63
SMAD3-208ENST00000558827 RAC3P60763 192 aa11.13□□□□□ -0.63
SMAD3-208ENST00000558827 DSTNP60981 165 aa11.13□□□□□ -0.63
SMAD3-208ENST00000558827 SYT14P1Q58G82 188 aa11.13□□□□□ -0.63
SMAD3-208ENST00000558827 MRPL2Q5T653 305 aaKnown RBP11.13□□□□□ -0.63
SMAD3-208ENST00000558827 C3orf33Q6P1S2 294 aa11.13□□□□□ -0.63
SMAD3-208ENST00000558827 TFAP2EQ6VUC0 442 aa11.13□□□□□ -0.63
SMAD3-208ENST00000558827 BEND4Q6ZU67 534 aa11.13□□□□□ -0.63
SMAD3-208ENST00000558827 HDXQ7Z353 690 aa11.13□□□□□ -0.63
SMAD3-208ENST00000558827 STK32CQ86UX6 486 aa11.13□□□□□ -0.63
SMAD3-208ENST00000558827 ADGRG3Q86Y34 549 aa11.13□□□□□ -0.63
SMAD3-208ENST00000558827 CCDC103Q8IW40 242 aa11.13□□□□□ -0.63
SMAD3-208ENST00000558827 GOLGA6L1Q8N7Z2 621 aa11.13□□□□□ -0.63
SMAD3-208ENST00000558827 FAM71CQ8NEG0 241 aa11.13□□□□□ -0.63
SMAD3-208ENST00000558827 FOXC2Q99958 501 aa11.13□□□□□ -0.63
SMAD3-208ENST00000558827 CCDC106Q9BWC9 280 aa11.13□□□□□ -0.63
SMAD3-208ENST00000558827 RMND5AQ9H871 391 aa11.13□□□□□ -0.63
SMAD3-208ENST00000558827 MTHFD2LQ9H903 347 aaPredicted RBP11.13□□□□□ -0.63
SMAD3-208ENST00000558827 TCF7L2Q9NQB0 619 aa11.13□□□□□ -0.63
SMAD3-208ENST00000558827 POLE3Q9NRF9 147 aa11.13□□□□□ -0.63
SMAD3-208ENST00000558827 GLRX2Q9NS18 164 aa11.13□□□□□ -0.63
SMAD3-208ENST00000558827 SLAMF8Q9P0V8 285 aa11.13□□□□□ -0.63
SMAD3-208ENST00000558827 ING1Q9UK53 422 aaPredicted RBP11.13□□□□□ -0.63
SMAD3-208ENST00000558827 LIPT1Q9Y234 373 aa11.13□□□□□ -0.63
SMAD3-208ENST00000558827 PCDHB14Q9Y5E9 798 aa11.13□□□□□ -0.63
SMAD3-208ENST00000558827 DSCAMO60469 2012 aa11.13□□□□□ -0.63
SMAD3-208ENST00000558827 CADP27708 2225 aa11.12□□□□□ -0.63
SMAD3-208ENST00000558827 TMED7-TICAM2A0A0A6YYA0 188 aa11.12□□□□□ -0.63
SMAD3-208ENST00000558827 TMEM72A0PK05 275 aa11.12□□□□□ -0.63
SMAD3-208ENST00000558827 ZC3H12DA2A288 527 aaKnown RBP11.12□□□□□ -0.63
SMAD3-208ENST00000558827 ZNF814B7Z6K7 855 aa11.12□□□□□ -0.63
SMAD3-208ENST00000558827 KLF4O43474 513 aa11.12□□□□□ -0.63
SMAD3-208ENST00000558827 FRS3O43559 492 aa11.12□□□□□ -0.63
SMAD3-208ENST00000558827 DNAJA2O60884 412 aa11.12□□□□□ -0.63
SMAD3-208ENST00000558827 RAMP1O60894 148 aa11.12□□□□□ -0.63
SMAD3-208ENST00000558827 CD53P19397 219 aa11.12□□□□□ -0.63
SMAD3-208ENST00000558827 TACR3P29371 465 aa11.12□□□□□ -0.63
SMAD3-208ENST00000558827 STX1BP61266 288 aa11.12□□□□□ -0.63
SMAD3-208ENST00000558827 HOXC5Q00444 222 aa11.12□□□□□ -0.63
SMAD3-208ENST00000558827 BNIP2Q12982 314 aa11.12□□□□□ -0.63
SMAD3-208ENST00000558827 CAPRIN1Q14444 709 aaKnown RBP11.12□□□□□ -0.63
SMAD3-208ENST00000558827 RNPS1Q15287 305 aaKnown RBP11.12□□□□□ -0.63
SMAD3-208ENST00000558827 DEFB113Q30KQ7 82 aa11.12□□□□□ -0.63
SMAD3-208ENST00000558827 AGKQ53H12 422 aa11.12□□□□□ -0.63
SMAD3-208ENST00000558827 ZNF836Q6ZNA1 936 aa11.12□□□□□ -0.63
SMAD3-208ENST00000558827 TMPPEQ6ZT21 453 aa11.12□□□□□ -0.63
SMAD3-208ENST00000558827 ATG4DQ86TL0 474 aaPredicted RBP11.12□□□□□ -0.63
SMAD3-208ENST00000558827 FUNDC1Q8IVP5 155 aa11.12□□□□□ -0.63
SMAD3-208ENST00000558827 PEX5LQ8IYB4 626 aa11.12□□□□□ -0.63
SMAD3-208ENST00000558827 CLIP4Q8N3C7 705 aa11.12□□□□□ -0.63
SMAD3-208ENST00000558827 CADM2Q8N3J6 435 aa11.12□□□□□ -0.63
SMAD3-208ENST00000558827 OR52P1PQ8NH57 321 aa11.12□□□□□ -0.63
SMAD3-208ENST00000558827 SLC38A5Q8WUX1 472 aa11.12□□□□□ -0.63
SMAD3-208ENST00000558827 GTF2H4Q92759 462 aa11.12□□□□□ -0.63
SMAD3-208ENST00000558827 NINJ1Q92982 152 aa11.12□□□□□ -0.63
SMAD3-208ENST00000558827 MAL2Q969L2 176 aa11.12□□□□□ -0.63
SMAD3-208ENST00000558827 S100PBPQ96BU1 408 aa11.12□□□□□ -0.63
SMAD3-208ENST00000558827 TMEM19Q96HH6 336 aa11.12□□□□□ -0.63
SMAD3-208ENST00000558827 C7orf26Q96N11 449 aa11.12□□□□□ -0.63
SMAD3-208ENST00000558827 PSD2Q9BQI7 771 aa11.12□□□□□ -0.63
SMAD3-208ENST00000558827 PAIP1Q9H074 479 aaKnown RBP11.12□□□□□ -0.63
SMAD3-208ENST00000558827 INTS9Q9NV88 658 aaKnown RBP11.12□□□□□ -0.63
SMAD3-208ENST00000558827 CCDC167Q9P0B6 97 aa11.12□□□□□ -0.63
SMAD3-208ENST00000558827 OSGIN1Q9UJX0 560 aa11.12□□□□□ -0.63
SMAD3-208ENST00000558827 TMED7Q9Y3B3 224 aa11.12□□□□□ -0.63
SMAD3-208ENST00000558827 C2CD3Q4AC94 2353 aa11.12□□□□□ -0.63
SMAD3-208ENST00000558827 USF3Q68DE3 2245 aa11.12□□□□□ -0.63
SMAD3-208ENST00000558827 FLNAP21333 2647 aaKnown RBP11.11□□□□□ -0.63
SMAD3-208ENST00000558827 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms