RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 EFNB3Q15768 340 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 UAP1Q16222 522 aaPredicted RBP4.52□□□□□ -1.69
SPG11-208ENST00000558155 PRSS53Q2L4Q9 553 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 TSNAXIP1Q2TAA8 658 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 AWAT1Q58HT5 328 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 SLC25A53Q5H9E4 307 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 FAM71E1Q6IPT2 247 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 KLHL24Q6TFL4 600 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 CBLN3Q6UW01 205 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 RPS27LQ71UM5 84 aaKnown RBP4.52□□□□□ -1.69
SPG11-208ENST00000558155 ZNF551Q7Z340 670 aaPredicted RBP4.52□□□□□ -1.69
SPG11-208ENST00000558155 SPATA19Q7Z5L4 167 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 PLD6Q8N2A8 252 aaKnown RBP4.52□□□□□ -1.69
SPG11-208ENST00000558155 ZNF786Q8N393 782 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 COX18Q8N8Q8 333 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 ANKS4BQ8N8V4 417 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 C1orf162Q8NEQ5 155 aaPredicted RBP4.52□□□□□ -1.69
SPG11-208ENST00000558155 CDC26Q8NHZ8 85 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 FAM76AQ8TAV0 307 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 ZNF483Q8TF39 744 aaPredicted RBP4.52□□□□□ -1.69
SPG11-208ENST00000558155 WDR60Q8WVS4 1066 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 TMEM234Q8WY98 164 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 SNX18Q96RF0 628 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 MRPL57Q9BQC6 102 aaKnown RBP4.52□□□□□ -1.69
SPG11-208ENST00000558155 ERP44Q9BS26 406 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 BTBD2Q9BX70 525 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 C1QTNF3Q9BXJ4 246 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 ACPTQ9BZG2 426 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 PLK3Q9H4B4 646 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 COQ10BQ9H8M1 238 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 SLC17A5Q9NRA2 495 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 DCTN4Q9UJW0 460 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 ZNF225Q9UK10 706 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 ICAM5Q9UMF0 924 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 USP22Q9UPT9 525 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 CARD8Q9Y2G2 431 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 ZNF281Q9Y2X9 895 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 TRAF6Q9Y4K3 522 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 PCDHGB1Q9Y5G3 927 aa4.52□□□□□ -1.69
SPG11-208ENST00000558155 SERTM1A2A2V5 107 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 HMX2A2RU54 273 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 EIF4E2O60573 245 aaKnown RBP4.51□□□□□ -1.69
SPG11-208ENST00000558155 RGS9O75916 674 aaPredicted RBP4.51□□□□□ -1.69
SPG11-208ENST00000558155 SUPT7LO94864 414 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 CRYAAP02489 173 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 ENO1P06733 434 aaKnown RBP4.51□□□□□ -1.69
SPG11-208ENST00000558155 OR4A8P0C604 315 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 TFPIP10646 304 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 ACP2P11117 423 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 ANPEPP15144 967 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 PGCP20142 388 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 TAC1P20366 129 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 IL2RGP31785 369 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 SLC1A3P43003 542 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 DIO1P49895 249 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 KHKP50053 298 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 ARFIP2P53365 341 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 ATP12AP54707 1039 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 PLTPP55058 493 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 GUCY2DQ02846 1103 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 CAV1Q03135 178 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 CBFBQ13951 182 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 QPRTQ15274 297 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 CD226Q15762 336 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 TOMM34Q15785 309 aaPredicted RBP4.51□□□□□ -1.69
SPG11-208ENST00000558155 DUSP5Q16690 384 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 IMPG1Q17R60 797 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 TIGD2Q4W5G0 525 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 KLHL26Q53HC5 615 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 TEX35Q5T0J7 233 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 C9orf135Q5VTT2 229 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 C3orf33Q6P1S2 294 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 FAHD2BQ6P2I3 314 aaPredicted RBP4.51□□□□□ -1.69
SPG11-208ENST00000558155 GPRIN3Q6ZVF9 776 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 SZRD1Q7Z422 152 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 ZAR1Q86SH2 424 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 GAS2L3Q86XJ1 694 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 SVOPLQ8N434 492 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 LRRC17Q8N6Y2 441 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 SLC16A11Q8NCK7 471 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 OR4F15Q8NGB8 312 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 OR5W2Q8NH69 310 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 RFWD2Q8NHY2 731 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 ZFP28Q8NHY6 868 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 PIGXQ8TBF5 258 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 SLC25A43Q8WUT9 341 aaPredicted RBP4.51□□□□□ -1.69
SPG11-208ENST00000558155 JADE3Q92613 823 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 TMEM186Q96B77 213 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 CHMP6Q96FZ7 201 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 FAHD2AQ96GK7 314 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 C16orf58Q96GQ5 468 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 ZNF382Q96SR6 550 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 KLHDC3Q9BQ90 382 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 KATNB1Q9BVA0 655 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 SUCNR1Q9BXA5 334 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 DPH5Q9H2P9 285 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 MRPL46Q9H2W6 279 aaKnown RBP4.51□□□□□ -1.69
SPG11-208ENST00000558155 PIGUQ9H490 435 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 OBP2BQ9NPH6 170 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 CA10Q9NS85 328 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms