RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.74□□□□□ -1.33
SPG11-204ENST00000557866 SYNDIG1LA6NDD5 238 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 C4orf47A7E2U8 309 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 H3BN98 237 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 PRKYO43930 277 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 FAM20BO75063 409 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 ENTPD6O75354 484 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 REM1O75628 298 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 KLF7O75840 302 aaPredicted RBP6.74□□□□□ -1.33
SPG11-204ENST00000557866 NADKO95544 446 aaPredicted RBP6.74□□□□□ -1.33
SPG11-204ENST00000557866 CSTAP01040 98 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 GSTM3P21266 225 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 TGM1P22735 817 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 MST1P26927 711 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 ABCD3P28288 659 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 LCN1P31025 176 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 IFNA8P32881 189 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 MAP2K4P45985 399 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 GIPRP48546 466 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 NUDT6P53370 316 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 FXYD6P3P58550 94 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 SLC26A5P58743 744 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 SNRPGP62308 76 aaKnown RBP6.74□□□□□ -1.33
SPG11-204ENST00000557866 RNF4P78317 190 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 MVKQ03426 396 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 PRKCDQ05655 676 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 SKP2Q13309 424 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 RAB39AQ14964 217 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 NEDD8Q15843 81 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 CNPY1Q3B7I2 92 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 ZBED5Q49AG3 693 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 CCDC157Q569K6 752 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 HLA-DQA1Q5Y7H0 255 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 BORAQ6PGQ7 559 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 CBLN3Q6UW01 205 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 ZNF620Q6ZNG0 422 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 SLC29A4Q7RTT9 530 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 BCDIN3DQ7Z5W3 292 aaKnown RBP6.74□□□□□ -1.33
SPG11-204ENST00000557866 P3H2Q8IVL5 708 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 RNF113BQ8IZP6 322 aaKnown RBP6.74□□□□□ -1.33
SPG11-204ENST00000557866 SLC34A3Q8N130 599 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 C17orf47Q8NEP4 570 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 OR4Q3Q8NH05 313 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 WDR36Q8NI36 951 aaKnown RBP6.74□□□□□ -1.33
SPG11-204ENST00000557866 FAR1Q8WVX9 515 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 OIT3Q8WWZ8 545 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 MR1Q95460 341 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 MUL1Q969V5 352 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 DGCR14Q96DF8 476 aaKnown RBP6.74□□□□□ -1.33
SPG11-204ENST00000557866 HSPBAP1Q96EW2 488 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 IL4I1Q96RQ9 567 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 NODALQ96S42 347 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 TRIM2Q9C040 744 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 ENKD1Q9H0I2 346 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 SLC25A19Q9HC21 320 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 AMBNQ9NP70 447 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 TMEM9BQ9NQ34 198 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 MEPEQ9NQ76 525 aaPredicted RBP6.74□□□□□ -1.33
SPG11-204ENST00000557866 IMPAD1Q9NX62 359 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 SELENONQ9NZV5 590 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 NDUFA13Q9P0J0 144 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 BLOC1S6Q9UL45 172 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 SLC35A3Q9Y2D2 325 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 CARD8Q9Y2G2 431 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 TPRKBQ9Y3C4 175 aa6.74□□□□□ -1.33
SPG11-204ENST00000557866 TRBV11-1A0A0K0K1C0 115 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 UNC119BA6NIH7 251 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 ALG1L2C9J202 215 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 KPNA4O00629 521 aaPredicted RBP6.73□□□□□ -1.33
SPG11-204ENST00000557866 SCDO00767 359 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 CHP2O43745 196 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 FADS1O60427 444 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 PTP4A3O75365 173 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 SEC14L2O76054 403 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 INMTO95050 263 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 MT-CO3P00414 261 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 CELA2AP08217 269 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 CYC1P08574 325 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 UBL4AP11441 157 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 ACVR2AP27037 513 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 IL12BP29460 328 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 C21orf33P30042 268 aaPredicted RBP6.73□□□□□ -1.33
SPG11-204ENST00000557866 SLC15A1P46059 708 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 PCYT1AP49585 367 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 CTBP2P56545 445 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 CDC42P60953 191 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 CSNK2BP67870 215 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 E2F1Q01094 437 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 EMX1Q04741 257 aaPredicted RBP6.73□□□□□ -1.33
SPG11-204ENST00000557866 PLCXD2Q0VAA5 305 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 TCF15Q12870 199 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 FHL1Q13642 323 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 NCF4Q15080 339 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 PCOLCEQ15113 449 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 ISXQ2M1V0 245 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 ALG10BQ5I7T1 473 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 CLEC12AQ5QGZ9 265 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 TMEM201Q5SNT2 666 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 HSDL2Q6YN16 418 aa6.73□□□□□ -1.33
SPG11-204ENST00000557866 PTCHD4Q6ZW05 846 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms