RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 IGKV1D-42A0A075B6H8 117 aa13.16□□□□□ -0.3
ARHGEF40-208ENST00000557498 CDK2AP1O14519 115 aa13.16□□□□□ -0.3
ARHGEF40-208ENST00000557498 SNPHO15079 494 aa13.16□□□□□ -0.3
ARHGEF40-208ENST00000557498 TLX3O43711 291 aaPredicted RBP13.16□□□□□ -0.3
ARHGEF40-208ENST00000557498 SOX14O95416 240 aa13.16□□□□□ -0.3
ARHGEF40-208ENST00000557498 P04436 131 aa13.16□□□□□ -0.3
ARHGEF40-208ENST00000557498 TP53P04637 393 aaPredicted RBP13.16□□□□□ -0.3
ARHGEF40-208ENST00000557498 RPSAP08865 295 aaKnown RBP13.16□□□□□ -0.3
ARHGEF40-208ENST00000557498 MAKP20794 623 aa13.16□□□□□ -0.3
ARHGEF40-208ENST00000557498 CHMP24386 653 aa13.16□□□□□ -0.3
ARHGEF40-208ENST00000557498 EPHA2P29317 976 aa13.16□□□□□ -0.3
ARHGEF40-208ENST00000557498 RPS6KA3P51812 740 aa13.16□□□□□ -0.3
ARHGEF40-208ENST00000557498 POLR2HP52434 150 aaKnown RBP13.16□□□□□ -0.3
ARHGEF40-208ENST00000557498 CRISP1P54107 249 aa13.16□□□□□ -0.3
ARHGEF40-208ENST00000557498 TPD52P55327 224 aaPredicted RBP13.16□□□□□ -0.3
ARHGEF40-208ENST00000557498 DLX5P56178 289 aa13.16□□□□□ -0.3
ARHGEF40-208ENST00000557498 OC90Q02509 493 aaPredicted RBP13.16□□□□□ -0.3
ARHGEF40-208ENST00000557498 KRT80Q6KB66 452 aa13.16□□□□□ -0.3
ARHGEF40-208ENST00000557498 UGT2A3Q6UWM9 527 aa13.16□□□□□ -0.3
ARHGEF40-208ENST00000557498 RASSF6Q6ZTQ3 369 aa13.16□□□□□ -0.3
ARHGEF40-208ENST00000557498 TMPRSS11FQ6ZWK6 438 aa13.16□□□□□ -0.3
ARHGEF40-208ENST00000557498 MDGA2Q7Z553 956 aa13.16□□□□□ -0.3
ARHGEF40-208ENST00000557498 CDK20Q8IZL9 346 aa13.16□□□□□ -0.3
ARHGEF40-208ENST00000557498 C8orf59Q8N0T1 100 aaPredicted RBP13.16□□□□□ -0.3
ARHGEF40-208ENST00000557498 ZNF248Q8NDW4 579 aa13.16□□□□□ -0.3
ARHGEF40-208ENST00000557498 OR4K17Q8NGC6 315 aa13.16□□□□□ -0.3
ARHGEF40-208ENST00000557498 TMEM41AQ96HV5 264 aa13.16□□□□□ -0.3
ARHGEF40-208ENST00000557498 HRASLS5Q96KN8 279 aa13.16□□□□□ -0.3
ARHGEF40-208ENST00000557498 MUS81Q96NY9 551 aa13.16□□□□□ -0.3
ARHGEF40-208ENST00000557498 TMEM43Q9BTV4 400 aa13.16□□□□□ -0.3
ARHGEF40-208ENST00000557498 SLC19A3Q9BZV2 496 aa13.16□□□□□ -0.3
ARHGEF40-208ENST00000557498 PROK2Q9HC23 129 aa13.16□□□□□ -0.3
ARHGEF40-208ENST00000557498 SACM1LQ9NTJ5 587 aa13.16□□□□□ -0.3
ARHGEF40-208ENST00000557498 C20orf141Q9NUB4 165 aa13.16□□□□□ -0.3
ARHGEF40-208ENST00000557498 GPR83Q9NYM4 423 aa13.16□□□□□ -0.3
ARHGEF40-208ENST00000557498 OSGIN1Q9UJX0 560 aa13.16□□□□□ -0.3
ARHGEF40-208ENST00000557498 PCDHGB5Q9Y5G0 923 aa13.16□□□□□ -0.3
ARHGEF40-208ENST00000557498 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 HTR3EA5X5Y0 456 aa13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 UNC119BA6NIH7 251 aa13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 ENO4A6NNW6 628 aa13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 ZAR1LA6NP61 321 aa13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 FAM47E-STBD1D6RA91 191 aa13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 H3BN98 237 aa13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 ETV2O00321 342 aaPredicted RBP13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 CDC42EP2O14613 210 aa13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 SNX4O95219 450 aa13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 IGF2P01344 180 aa13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 PRKCAP17252 672 aa13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 GGT2P36268 569 aa13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 HTR3AP46098 478 aa13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 ZNF41P51814 821 aaPredicted RBP13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 CRYZQ08257 329 aaKnown RBP13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 RAPSNQ13702 412 aa13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 TUBA3CQ13748 450 aa13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 TUBA3EQ6PEY2 450 aa13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 Q6ZPB1 254 aaPredicted RBP13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 ZNF227Q86WZ6 799 aa13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 KIF18BQ86Y91 864 aa13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 PLCZ1Q86YW0 608 aa13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 P3H2Q8IVL5 708 aa13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 CLDN22Q8N7P3 220 aa13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 WDSUB1Q8N9V3 476 aa13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 PSD4Q8NDX1 1056 aa13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 SETD9Q8NE22 299 aa13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 SNIP1Q8TAD8 396 aaKnown RBP13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 BPIFA2Q96DR5 249 aa13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 SGTBQ96EQ0 304 aa13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 APOL4Q9BPW4 351 aa13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 UTP23Q9BRU9 249 aaKnown RBP13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 DPH1Q9BZG8 443 aa13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 ING2Q9H160 280 aa13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 TIMMDC1Q9NPL8 285 aa13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 PNPLA3Q9NST1 481 aa13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 MED17Q9NVC6 651 aa13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 LRFN1Q9P244 771 aa13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 FBXL2Q9UKC9 423 aa13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 WDR87Q6ZQQ6 2873 aa13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 CNOT1A5YKK6 2376 aaKnown RBP13.15□□□□□ -0.3
ARHGEF40-208ENST00000557498 EFCAB9A8MZ26 197 aa13.14□□□□□ -0.31
ARHGEF40-208ENST00000557498 G3V3Y1 287 aa13.14□□□□□ -0.31
ARHGEF40-208ENST00000557498 KLK10O43240 276 aa13.14□□□□□ -0.31
ARHGEF40-208ENST00000557498 IGFBP1P08833 259 aaPredicted RBP13.14□□□□□ -0.31
ARHGEF40-208ENST00000557498 CXCR1P25024 350 aa13.14□□□□□ -0.31
ARHGEF40-208ENST00000557498 POU1F1P28069 291 aa13.14□□□□□ -0.31
ARHGEF40-208ENST00000557498 CD96P40200 585 aa13.14□□□□□ -0.31
ARHGEF40-208ENST00000557498 MASP1P48740 699 aa13.14□□□□□ -0.31
ARHGEF40-208ENST00000557498 CHN2P52757 468 aa13.14□□□□□ -0.31
ARHGEF40-208ENST00000557498 NUP107P57740 925 aa13.14□□□□□ -0.31
ARHGEF40-208ENST00000557498 FOXF1Q12946 379 aa13.14□□□□□ -0.31
ARHGEF40-208ENST00000557498 PTGES3Q15185 160 aaKnown RBP13.14□□□□□ -0.31
ARHGEF40-208ENST00000557498 INPP5JQ15735 1006 aaPredicted RBP13.14□□□□□ -0.31
ARHGEF40-208ENST00000557498 PLPPR5Q32ZL2 321 aa13.14□□□□□ -0.31
ARHGEF40-208ENST00000557498 SLC25A53Q5H9E4 307 aa13.14□□□□□ -0.31
ARHGEF40-208ENST00000557498 SLX4IPQ5VYV7 408 aa13.14□□□□□ -0.31
ARHGEF40-208ENST00000557498 ARSKQ6UWY0 536 aa13.14□□□□□ -0.31
ARHGEF40-208ENST00000557498 ISLR2Q6UXK2 745 aa13.14□□□□□ -0.31
ARHGEF40-208ENST00000557498 ZNF620Q6ZNG0 422 aa13.14□□□□□ -0.31
ARHGEF40-208ENST00000557498 LINC00696Q6ZRV3 163 aa13.14□□□□□ -0.31
ARHGEF40-208ENST00000557498 THAP5Q7Z6K1 395 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms