RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 ANKRD30BLA7E2S9 258 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 SRRM5B3KS81 715 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 F5H6K3 240 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 SGK494L7N484 410 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 AP3B1O00203 1094 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 CHADO15335 359 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 YKT6O15498 198 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 GALR3O60755 368 aaPredicted RBP3.65□□□□□ -1.83
PRPF39-212ENST00000557477 VPS26AO75436 327 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 IGSF6O95976 241 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 MBD3O95983 291 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 GOT2P00505 430 aaKnown RBP3.65□□□□□ -1.83
PRPF39-212ENST00000557477 AK1P00568 194 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 PPP2R1BP30154 601 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 HTR5AP47898 357 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 SNAP25P60880 206 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 DEFB103AP81534 67 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 CNTN2Q02246 1040 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 HSF2Q03933 536 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 ZNF33BQ06732 778 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 KLRC3Q07444 240 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 KLHL30Q0D2K2 578 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 LRRC74AQ0VAA2 488 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 ZP4Q12836 540 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 PPP1R7Q15435 360 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 ANKDD1AQ495B1 522 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 NHLRC3Q5JS37 347 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 DMKNQ6E0U4 476 aaPredicted RBP3.65□□□□□ -1.83
PRPF39-212ENST00000557477 ARSKQ6UWY0 536 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 ABRAXAS1Q6UWZ7 409 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 ZNF562Q6V9R5 426 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 BZW1Q7L1Q6 419 aaKnown RBP3.65□□□□□ -1.83
PRPF39-212ENST00000557477 MISPQ8IVT2 679 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 CCDC36Q8IYA8 594 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 FAM133AQ8N9E0 248 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 CSNK1G2-AS1Q8NCQ2 148 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 NFAM1Q8NET5 270 aaPredicted RBP3.65□□□□□ -1.83
PRPF39-212ENST00000557477 CCDC148Q8NFR7 591 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 OR6T1Q8NGN1 323 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 ITLN1Q8WWA0 313 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 RBM18Q96H35 190 aaKnown RBP3.65□□□□□ -1.83
PRPF39-212ENST00000557477 TSGA13Q96PP4 275 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 DPH5Q9H2P9 285 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 BOLA2Q9H3K6 86 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 KAT8Q9H7Z6 458 aaKnown RBP3.65□□□□□ -1.83
PRPF39-212ENST00000557477 VCX3AQ9NNX9 186 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 POLE3Q9NRF9 147 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 CENPMQ9NSP4 180 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 MTRF1LQ9UGC7 380 aaKnown RBP3.65□□□□□ -1.83
PRPF39-212ENST00000557477 ATP6V1DQ9Y5K8 247 aa3.65□□□□□ -1.83
PRPF39-212ENST00000557477 COL11A1P12107 1806 aaPredicted RBP3.65□□□□□ -1.83
PRPF39-212ENST00000557477 NPIPA5A0A0B4J1W7 369 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 FBLL1A6NHQ2 334 aaKnown RBP3.64□□□□□ -1.83
PRPF39-212ENST00000557477 NPIPA5E9PKD4 350 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 SPECC1L-ADORA2AF8WAN1 911 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 HAT1O14929 419 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 NVLO15381 856 aaKnown RBP3.64□□□□□ -1.83
PRPF39-212ENST00000557477 PHF1O43189 567 aaPredicted RBP3.64□□□□□ -1.83
PRPF39-212ENST00000557477 LRRTM2O43300 516 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 SULT1B1O43704 296 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 MGRN1O60291 552 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 SUPT3HO75486 399 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 TBX6O95947 436 aaPredicted RBP3.64□□□□□ -1.83
PRPF39-212ENST00000557477 IGHV3-9P01782 118 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 APOEP02649 317 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 WNT2P09544 360 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 IQCF3P0C7M6 154 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 SLC35G4P0C7Q5 338 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 ZNF286BP0CG31 522 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 RPS2P15880 293 aaKnown RBP3.64□□□□□ -1.83
PRPF39-212ENST00000557477 SYT1P21579 422 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 PAICSP22234 425 aaKnown RBP3.64□□□□□ -1.83
PRPF39-212ENST00000557477 PRKACBP22694 351 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 CYP2F1P24903 491 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 HMGCLP35914 325 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 HAAOP46952 286 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 SERPINB8P50452 374 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 PPIAP62937 165 aaKnown RBP3.64□□□□□ -1.83
PRPF39-212ENST00000557477 MRPS6P82932 125 aaKnown RBP3.64□□□□□ -1.83
PRPF39-212ENST00000557477 GBE1Q04446 702 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 PDZK1IP1Q13113 114 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 SCGB2A2Q13296 93 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 GPM6BQ13491 265 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 GNA13Q14344 377 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 MAPRE2Q15555 327 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 TCEAL5Q5H9L2 206 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 LEG1Q6P5S2 330 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 SLC39A4Q6P5W5 647 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 ANGPTL8Q6UXH0 198 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 HACD2Q6Y1H2 254 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 ZNF600Q6ZNG1 722 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 STOX1Q6ZVD7 989 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 TMUB2Q71RG4 321 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 TSEN54Q7Z6J9 526 aaKnown RBP3.64□□□□□ -1.83
PRPF39-212ENST00000557477 FAM9CQ8IZT9 166 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 ARHGAP18Q8N392 663 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 POM121L12Q8N7R1 296 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 BBOF1Q8ND07 529 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 ZNF671Q8TAW3 534 aa3.64□□□□□ -1.83
PRPF39-212ENST00000557477 CRYGNQ8WXF5 182 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms