RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 HTR1EP28566 365 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 PDHA2P29803 388 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 CDKN2BP42772 138 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 NSG1P42857 185 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 KCNJ10P78508 379 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 OTUD4Q01804 1114 aaKnown RBP4.4□□□□□ -1.71
HIF1A-209ENST00000556827 CACNG1Q06432 222 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 PTPRCAPQ14761 206 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 TMED2Q15363 201 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 INAQ16352 499 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 UGT3A2Q3SY77 523 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 KRT71Q3SY84 523 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 DNAJC21Q5F1R6 531 aaKnown RBP4.4□□□□□ -1.71
HIF1A-209ENST00000556827 ZNF789Q5FWF6 425 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 SLC25A53Q5H9E4 307 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 PRR27Q6MZM9 219 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 C11orf63Q6NUN7 778 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 CNSTQ6PJW8 725 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 XKRXQ6PP77 449 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 LINC00696Q6ZRV3 163 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 RBPMS2Q6ZRY4 209 aaKnown RBP4.4□□□□□ -1.71
HIF1A-209ENST00000556827 NLRP9Q7RTR0 991 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 SERPINA9Q86WD7 417 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 OR5AR1Q8NGP9 310 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 OR13C4Q8NGS5 318 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 OR2T11Q8NH01 316 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 OR5K2Q8NHB8 316 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 SKA2Q8WVK7 121 aaPredicted RBP4.4□□□□□ -1.71
HIF1A-209ENST00000556827 ELMO1Q92556 727 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 GIMAP5Q96F15 307 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 QKIQ96PU8 341 aaKnown RBP eCLIP4.4□□□□□ -1.71
HIF1A-209ENST00000556827 TBL1YQ9BQ87 522 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 SELENOSQ9BQE4 189 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 RAB11FIP5Q9BXF6 653 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 FAM129AQ9BZQ8 928 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 SHARPINQ9H0F6 387 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 GBA3Q9H227 469 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 FAM96AQ9H5X1 160 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 CUTCQ9NTM9 273 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 UTP6Q9NYH9 597 aaKnown RBP4.4□□□□□ -1.71
HIF1A-209ENST00000556827 EURLQ9NYK6 297 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 IFNKQ9P0W0 207 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 ZNF282Q9UDV7 671 aaPredicted RBP4.4□□□□□ -1.71
HIF1A-209ENST00000556827 PYGO1Q9Y3Y4 419 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 MMP24Q9Y5R2 645 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 AHCTF1Q8WYP5 2266 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 BOD1L1Q8NFC6 3051 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 ANKRD36A6QL64 1941 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 UNC13CQ8NB66 2214 aa4.4□□□□□ -1.71
HIF1A-209ENST00000556827 LRRK1Q38SD2 2015 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 A0A087X002 238 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 APOC4-APOC2K7ER74 178 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 RASGRF2O14827 1237 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 CDC123O75794 336 aaPredicted RBP4.39□□□□□ -1.71
HIF1A-209ENST00000556827 APOC2P02655 101 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 GYPCP04921 128 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 GPIP06744 558 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 ANXA5P08758 320 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 IGHV4-31P0DP07 118 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 CD22P20273 847 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 MAGP20916 626 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 KCNK10P57789 538 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 EIF3EP60228 445 aaKnown RBP4.39□□□□□ -1.71
HIF1A-209ENST00000556827 XIAPP98170 497 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 ACSM1Q08AH1 577 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 VEZF1Q14119 521 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 ITIH4Q14624 930 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 TMEM187Q14656 261 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 HERC3Q15034 1050 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 SPA17Q15506 151 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 TAF13Q15543 124 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 ODF4Q2M2E3 257 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 ANKRD20A2Q5SQ80 823 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 ANKRD20A1Q5TYW2 823 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 ANKRD20A3Q5VUR7 823 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 CAVIN1Q6NZI2 390 aaKnown RBP4.39□□□□□ -1.71
HIF1A-209ENST00000556827 PRMT9Q6P2P2 845 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 BHLHB9Q6PI77 547 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 IGFL2Q6UWQ7 119 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 SHISA6Q6ZSJ9 500 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 NDUFAF7Q7L592 441 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 LINC00523Q86TU6 105 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 LUZP1Q86V48 1076 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 MMD2Q8IY49 270 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 KATNAL2Q8IYT4 538 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 CLDN19Q8N6F1 224 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 DNAAF3Q8N9W5 541 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 TMEM178AQ8NBL3 297 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 NAT14Q8WUY8 206 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 ASZ1Q8WWH4 475 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 METTL21AQ8WXB1 218 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 TAF15Q92804 592 aaKnown RBP eCLIP4.39□□□□□ -1.71
HIF1A-209ENST00000556827 ERP27Q96DN0 273 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 OTUB1Q96FW1 271 aaPredicted RBP4.39□□□□□ -1.71
HIF1A-209ENST00000556827 MAGED4Q96JG8 741 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 FOPNLQ96NB1 174 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 SERINC2Q96SA4 455 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 CPNE1Q99829 537 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 APOL2Q9BQE5 337 aa4.39□□□□□ -1.71
HIF1A-209ENST00000556827 SLC26A1Q9H2B4 701 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms