RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 MS4A10Q96PG2 267 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 FRG2BQ96QU4 278 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 KCNA7Q96RP8 456 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 MYADMQ96S97 322 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 SPAG8Q99932 426 aaPredicted RBP4.71□□□□□ -1.66
SRP54-211ENST00000556445 KXD1Q9BQD3 176 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 HAUS8Q9BT25 410 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 WRAP53Q9BUR4 548 aaKnown RBP4.71□□□□□ -1.66
SRP54-211ENST00000556445 EFCAB11Q9BUY7 163 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 RAB11FIP5Q9BXF6 653 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 MRPL37Q9BZE1 423 aaKnown RBP4.71□□□□□ -1.66
SRP54-211ENST00000556445 PKIBQ9C010 78 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 FAM192AQ9GZU8 254 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 SPRTNQ9H040 489 aaPredicted RBP4.71□□□□□ -1.66
SRP54-211ENST00000556445 PCBD2Q9H0N5 130 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 Q9H521 79 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 LRTM1Q9HBL6 345 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 MKKSQ9NPJ1 570 aaPredicted RBP4.71□□□□□ -1.66
SRP54-211ENST00000556445 C8orf4Q9NR00 106 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 PHPT1Q9NRX4 125 aaPredicted RBP4.71□□□□□ -1.66
SRP54-211ENST00000556445 TRNAU1APQ9NX07 287 aaKnown RBP4.71□□□□□ -1.66
SRP54-211ENST00000556445 TMEM181Q9P2C4 612 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 ABCD2Q9UBJ2 740 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 CD300AQ9UGN4 299 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 ACSL5Q9ULC5 683 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 TMEM184BQ9Y519 407 aaPredicted RBP4.71□□□□□ -1.66
SRP54-211ENST00000556445 CKAP5Q14008 2032 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 MYO9BQ13459 2157 aa4.71□□□□□ -1.66
SRP54-211ENST00000556445 TRPM6Q9BX84 2022 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 ARHGEF33A8MVX0 844 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 ANHXE9PGG2 379 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 H0YIG0 161 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 H0YJX3 145 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 INPP4BO15327 924 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 MID1O15344 667 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 CSO75390 466 aaKnown RBP4.7□□□□□ -1.66
SRP54-211ENST00000556445 POP7O75817 140 aaKnown RBP4.7□□□□□ -1.66
SRP54-211ENST00000556445 PDE9AO76083 593 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 KDM4BO94953 1096 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 C1orf105O95561 183 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 HOXC4P09017 264 aaPredicted RBP4.7□□□□□ -1.66
SRP54-211ENST00000556445 DANCRP0C864 163 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 FCGR1AP12314 374 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 ZNF3P17036 446 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 XRCC1P18887 633 aaPredicted RBP4.7□□□□□ -1.66
SRP54-211ENST00000556445 PRPS1L1P21108 318 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 HTR1EP28566 365 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 TRIM23P36406 574 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 SLC7A2P52569 658 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 CTSCP53634 463 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 ADPRHP54922 357 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 DIO3P55073 304 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 CLDN8P56748 225 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 PFN3P60673 137 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 RPS14P62263 151 aaKnown RBP4.7□□□□□ -1.66
SRP54-211ENST00000556445 RPL38P63173 70 aaKnown RBP4.7□□□□□ -1.66
SRP54-211ENST00000556445 RPS21P63220 83 aaKnown RBP4.7□□□□□ -1.66
SRP54-211ENST00000556445 NAE1Q13564 534 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 CEACAM7Q14002 265 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 KRT33BQ14525 404 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 ABRAXAS2Q15018 415 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 POM121L1PQ3SYA9 428 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 FAM174BQ3ZCQ3 159 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 VPS26BQ4G0F5 336 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 FAM98BQ52LJ0 330 aaKnown RBP4.7□□□□□ -1.66
SRP54-211ENST00000556445 SPIN4Q56A73 249 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 XKR6Q5GH73 641 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 EOGTQ5NDL2 527 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 TCHHL1Q5QJ38 904 aaPredicted RBP4.7□□□□□ -1.66
SRP54-211ENST00000556445 PIP5KL1Q5T9C9 394 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 DCAF12L2Q5VW00 463 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 PRAMEF7Q5VXH5 474 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 PARM1Q6UWI2 310 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 THOC6Q86W42 341 aaKnown RBP4.7□□□□□ -1.66
SRP54-211ENST00000556445 APLFQ8IW19 511 aaPredicted RBP4.7□□□□□ -1.66
SRP54-211ENST00000556445 DCUN1D3Q8IWE4 304 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 LAS2Q8IYD9 372 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 ADPRHL1Q8NDY3 354 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 OR8J3Q8NGG0 315 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 BBS10Q8TAM1 723 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 HMGCLL1Q8TB92 370 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 TMEM170AQ8WVE7 144 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 RLN3Q8WXF3 142 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 FAM46BQ96A09 425 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 TESCQ96BS2 214 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 EFHD2Q96C19 240 aaPredicted RBP4.7□□□□□ -1.66
SRP54-211ENST00000556445 CXorf40BQ96DE9 158 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 OTUB1Q96FW1 271 aaPredicted RBP4.7□□□□□ -1.66
SRP54-211ENST00000556445 COX14Q96I36 57 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 EGLN2Q96KS0 407 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 BTBD9Q96Q07 612 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 FEVQ99581 238 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 ZNF184Q99676 751 aaPredicted RBP4.7□□□□□ -1.66
SRP54-211ENST00000556445 GABRG3Q99928 467 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 TIMM29Q9BSF4 260 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 GTPBP2Q9BX10 602 aaKnown RBP4.7□□□□□ -1.66
SRP54-211ENST00000556445 PLA2G2FQ9BZM2 168 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 OR2AG1Q9H205 316 aa4.7□□□□□ -1.66
SRP54-211ENST00000556445 TUBA8Q9NY65 449 aaPredicted RBP4.7□□□□□ -1.66
SRP54-211ENST00000556445 SPATA7Q9P0W8 599 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms